| Gene Symbol | cl9715_1b |
| Entrez Gene ID | 100284072 |
| Full Name | ENT domain containing protein |
| Synonyms | GRMZM2G041633 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » cl9715_1b cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| NM_001156970.1 | NP_001150442.1 | uncharacterized protein LOC100284072 |
| XM_008669842.2 | XP_008668064.1 | uncharacterized protein LOC100284072 isoform X4 |
| XM_008669843.3 | XP_008668065.1 | uncharacterized protein LOC100284072 isoform X5 |
| XM_020547777.1 | XP_020403366.1 | uncharacterized protein LOC100284072 isoform X6 |
| XM_020547776.1 | XP_020403365.1 | uncharacterized protein LOC100284072 isoform X3 |
| XM_020547775.1 | XP_020403364.1 | uncharacterized protein LOC100284072 isoform X1 |
| XM_008669841.2 | XP_008668063.1 | uncharacterized protein LOC100284072 isoform X2 |
| XM_008669841.3 | XP_008668063.1 | uncharacterized protein LOC100284072 isoform X2 |
| XM_008669843.2 | XP_008668065.1 | uncharacterized protein LOC100284072 isoform X5 |
| XM_020547776.2 | XP_020403365.1 | uncharacterized protein LOC100284072 isoform X3 |
Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing.
Vega-Arreguín JC, Ibarra-Laclette E, Jiménez-Moraila B, Martínez O, Vielle-Calzada JP, Herrera-Estrella L, Herrera-Estrella A
BMC genomics10299(2009 Jul)
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cl9715_1b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cl9715_1b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa08946 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001156970.1 | |
| Accession Version | NM_001156970.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1185bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1557072000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU967003.1. ##Evidence-Data-START## Transcript exon combination :: EU967003.1, SRR3147028.3071.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780084, SAMN00780085 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001150442.1 |
| CDS | 257..1441 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001156970.1 |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29022 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008669841.2 , XM_008669841.3 | |
| Accession Version | XM_008669841.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X2 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008669841.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008668063.1 |
| CDS | 292..1473 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008669841.2 |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29022 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008669841.2 , XM_008669841.3 | |
| Accession Version | XM_008669841.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008669841.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008668063.1 |
| CDS | 291..1472 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008669841.3 |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29023 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008669842.2 | |
| Accession Version | XM_008669842.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1161bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008669842.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGCAC AAAATAGAGG ACTAAGAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008668064.1 |
| CDS | 277..1437 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008669842.2 |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGCAC AAAATAGAGG ACTAAGAGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29024 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008669843.3 , XM_008669843.2 | |
| Accession Version | XM_008669843.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1155bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X5 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008669843.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008668065.1 |
| CDS | 291..1445 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008669843.3 |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa29024 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008669843.3 , XM_008669843.2 | |
| Accession Version | XM_008669843.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1155bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X5 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008669843.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008668065.1 |
| CDS | 292..1446 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008669843.2 |
1 | ATGAAGGCGG TGGGATACAG CCCCTACGAC AGCAGCGGGA CTGATGACGA TCTCCCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa57284 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020547775.1 | |
| Accession Version | XM_020547775.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1209bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020403364.1 |
| CDS | 843..2051 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020547775.1 |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa57285 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020547776.1 , XM_020547776.2 | |
| Accession Version | XM_020547776.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X3 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020403365.1 |
| CDS | 843..2024 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020547776.1 |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa57285 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020547776.1 , XM_020547776.2 | |
| Accession Version | XM_020547776.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1182bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_020547776.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020403365.1 |
| CDS | 843..2024 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020547776.2 |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa57286 | |
| Clone ID Related Accession (Same CDS sequence) | XM_020547777.1 | |
| Accession Version | XM_020547777.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1212bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100284072 isoform X6 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024460.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020403366.1 |
| CDS | 1172..2383 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_020547777.1 |
1 | ATGGTTTGCT GTCGAGTTGT GCATTTCATA TACTACAGTA TTGGTTCCTC TCCCTTTATT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Deep sampling of the Palomero maize transcriptome by a high throughput strategy of pyrosequencing. |
Insights into corn genes derived from large-scale cDNA sequencing. |