| Gene Symbol | cl24314_1 |
| Entrez Gene ID | 100279713 |
| Full Name | Neutral/alkaline non-lysosomal ceramidase |
| Synonyms | GRMZM2G180732 |
| Gene Type | protein-coding |
| Organism | Zea mays |
IVD Raw Materials
ORF » Species Summary » Zea mays » cl24314_1 cDNA ORF clone
| mRNA | Protein | Name |
|---|---|---|
| NM_001152672.1 | NP_001146144.1 | uncharacterized protein LOC100279713 precursor |
| XM_008674493.2 | XP_008672715.1 | neutral/alkaline non-lysosomal ceramidase isoform X1 |
| XM_008674492.2 | XP_008672714.1 | neutral/alkaline non-lysosomal ceramidase isoform X1 |
| XM_008674493.3 | XP_008672715.1 | neutral/alkaline non-lysosomal ceramidase isoform X1 |
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Soderlund C, Descour A, Kudrna D, Bomhoff M, Boyd L, Currie J, Angelova A, Collura K, Wissotski M, Ashley E, Morrow D, Fernandes J, Walbot V, Yu Y
PLoS genetics5(11)e1000740(2009 Nov)
Insights into corn genes derived from large-scale cDNA sequencing.
Alexandrov NN, Brover VV, Freidin S, Troukhan ME, Tatarinova TV, Zhang H, Swaller TJ, Lu YP, Bouck J, Flavell RB, Feldmann KA
Plant molecular biology69(1-2)179-94(2009 Jan)
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.
Gardiner J, Schroeder S, Polacco ML, Sanchez-Villeda H, Fang Z, Morgante M, Landewe T, Fengler K, Useche F, Hanafey M, Tingey S, Chou H, Wing R, Soderlund C, Coe EH Jr
Plant physiology134(4)1317-26(2004 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following cl24314_1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cl24314_1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OZa17783 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001152672.1 | |
| Accession Version | NM_001152672.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1556121600000 | |
| Organism | Zea mays | |
| Product | uncharacterized protein LOC100279713 precursor | |
| Comment | Comment: PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from BT054743.1. ##Evidence-Data-START## Transcript exon combination :: BT054743.1, SRR3147030.11238.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00780135, SAMN00780136 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001146144.1 |
| CDS | 153..2510 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001152672.1 |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa27616 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008674493.2 , XM_008674492.2 , XM_008674493.3 | |
| Accession Version | XM_008674493.2 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1489852800000 | |
| Organism | Zea mays | |
| Product | neutral/alkaline non-lysosomal ceramidase isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008674493.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zea mays Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008672715.1 |
| CDS | 329..2686 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008674493.2 |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa27616 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008674493.2 , XM_008674492.2 , XM_008674493.3 | |
| Accession Version | XM_008674492.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | neutral/alkaline non-lysosomal ceramidase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2017 this sequence version replaced XM_008674492.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008672714.1 |
| CDS | 342..2699 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008674492.2 |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OZa27616 | |
| Clone ID Related Accession (Same CDS sequence) | XM_008674493.2 , XM_008674492.2 , XM_008674493.3 | |
| Accession Version | XM_008674493.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2358bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1513440000000 | |
| Organism | Zea mays | |
| Product | neutral/alkaline non-lysosomal ceramidase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024461.2) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2017 this sequence version replaced XM_008674493.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_008672715.1 |
| CDS | 321..2678 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_008674493.3 |
1 | ATGGAGGCAT CATCTTCCTT GCGCTTCCAA GTTTCTCGTT TTAGTTCGTT CAAGATATGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. |
Insights into corn genes derived from large-scale cDNA sequencing. |
Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. |