ORF » Species Summary » Zea mays » LOC100193348 cDNA ORF clone

LOC100193348 cDNA ORF clone, Zea mays

The following LOC100193348 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100193348 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OZa05901 NM_001138481.1
Latest version!		 Zea mays prolyl 4-hydroxylase 1 (LOC100193348), transcript variant 2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OZa71491 NM_001367436.1
Latest version!		 Zea mays prolyl 4-hydroxylase 1 (LOC100193348), transcript variant 1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC100193348 ( NM_001138481.1 ) cDNA ORF clone, Zea mays -> NP_001131953.1 Zea mays prolyl 4-hydroxylase 1 (LOC100193348), transcript variant 2, mRNA.
    Price & Availability↑
    CloneID OZa05901
    Clone ID Related Accession (Same CDS sequence) NM_001138481.1
    Accession Version NM_001138481.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 924bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1563206400000
    Organism Zea mays
    Product prolyl 4-hydroxylase 1 isoform 2
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BT035587.1. Transcript Variant: This variant (2) has a frameshift due to a single G insertion at position 169. ##Evidence-Data-START## Transcript exon combination :: BT035587.1, JF901712.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209, SAMN08026695 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCGGGCC GGCTGGCGGG GCGAGGCGGG AGGCCGCTGC TAGGCGGAAG TGGCGGGGGC 
    GGGAAGCGGG GCGGGAGGCC GTCGATGGCG GTCGTGGCGG CGCTGCTGCT GGCGTGCGCG 
    GCGCTGCTCC TGCTCCTGGC CCTCGGCGCG CTATCGCTGC CCGGGGCCTC CGACGGCTCC 
    GGGGGACGCG GTGCGGGGCT CTCGCTCTCG CGCCCCCGCT CGCGCTTCCG CAGATCCGCC 
    TTCGACTCGG GGCTAGAGAC GCGTGGGGAG AAGGGGGAGC CGTGGACGGA GGTGCTGTCG 
    TGGGAGCCCC GCGCGTTCGT GTACCACAAC TTCCTCTCCA AGGAAGAATG TGACCATTTG 
    ATTTCACTGG CAAAGCCTCA TATGAAGAAG TCAACAGTAG TTGATTCAGC AACTGGAGGC 
    AGCAAGGACA GCAGGGTGCG GACAAGTTCA GGAATGTTTC TTAGAAGAGG GCAGGACAAA 
    ATTATTCGGA CAATTGAGAA AAGGATAGCA GATTACACCT TCATACCTGT AGAGCAGGGT 
    GAGGGTCTTC AAGTTCTCCA CTATGAAGTT GGGCAGAAGT ATGAACCTCA CTTTGATTAC 
    TTCCATGATG ATTACAACAC CAAGAATGGA GGCCAGCGTA TAGCAACTCT TCTTATGTAT 
    CTTTCGGATG TTGAAGATGG TGGCGAGACT GTGTTCCCTT CGTCGACAAC AAACAGCAGC 
    TCGTCACCAT TTTATAATGA GCTGTCTGAA TGTGCAAAGG GTGGTCTATC TGTTAAACCA 
    AAGATGGGAG ATGCGCTTCT GTTCTGGAGC ATGAAGCCTG ATGGGTCCCT AGATCCCACA 
    AGCCTGCATG GTGGATGCCC AGTTATAAAA GGCAACAAAT GGTCATCGAC GAAGTGGATG 
    CGTGTTCATG AGTACAAAGT TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001131953.1
    CDS111..1034
    Translation

    Target ORF information:

    RefSeq Version NM_001138481.1
    Organism Zea mays
    Definition Zea mays prolyl 4-hydroxylase 1 (LOC100193348), transcript variant 2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001138481.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGCGGGCC GGCTGGCGGG GCGAGGCGGG AGGCCGCTGC TAGGCGGAAG TGGCGGGGGC 
    GGGAAGCGGG GCGGGAGGCC GTCGATGGCG GTCGTGGCGG CGCTGCTGCT GGCGTGCGCG 
    GCGCTGCTCC TGCTCCTGGC CCTCGGCGCG CTATCGCTGC CCGGGGCCTC CGACGGCTCC 
    GGGGGACGCG GTGCGGGGCT CTCGCTCTCG CGCCCCCGCT CGCGCTTCCG CAGATCCGCC 
    TTCGACTCGG GGCTAGAGAC GCGTGGGGAG AAGGGGGAGC CGTGGACGGA GGTGCTGTCG 
    TGGGAGCCCC GCGCGTTCGT GTACCACAAC TTCCTCTCCA AGGAAGAATG TGACCATTTG 
    ATTTCACTGG CAAAGCCTCA TATGAAGAAG TCAACAGTAG TTGATTCAGC AACTGGAGGC 
    AGCAAGGACA GCAGGGTGCG GACAAGTTCA GGAATGTTTC TTAGAAGAGG GCAGGACAAA 
    ATTATTCGGA CAATTGAGAA AAGGATAGCA GATTACACCT TCATACCTGT AGAGCAGGGT 
    GAGGGTCTTC AAGTTCTCCA CTATGAAGTT GGGCAGAAGT ATGAACCTCA CTTTGATTAC 
    TTCCATGATG ATTACAACAC CAAGAATGGA GGCCAGCGTA TAGCAACTCT TCTTATGTAT 
    CTTTCGGATG TTGAAGATGG TGGCGAGACT GTGTTCCCTT CGTCGACAAC AAACAGCAGC 
    TCGTCACCAT TTTATAATGA GCTGTCTGAA TGTGCAAAGG GTGGTCTATC TGTTAAACCA 
    AAGATGGGAG ATGCGCTTCT GTTCTGGAGC ATGAAGCCTG ATGGGTCCCT AGATCCCACA 
    AGCCTGCATG GTGGATGCCC AGTTATAAAA GGCAACAAAT GGTCATCGAC GAAGTGGATG 
    CGTGTTCATG AGTACAAAGT TTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC100193348 ( NM_001367436.1 ) cDNA ORF clone, Zea mays -> NP_001354365.1 Zea mays prolyl 4-hydroxylase 1 (LOC100193348), transcript variant 1, mRNA.
    Price & Availability↑
    CloneID OZa71491
    Clone ID Related Accession (Same CDS sequence) NM_001367436.1
    Accession Version NM_001367436.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1071bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1563206400000
    Organism Zea mays
    Product prolyl 4-hydroxylase 1 isoform 1
    Comment Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from FK970608.1, LPUQ01001244.1 and BT035587.1. Transcript Variant: This variant (1) exactly matches the RefSeq genome. ##Evidence-Data-START## Transcript exon combination :: BT035587.1, JF901712.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096209, SAMN08026695 [ECO:0000348] ##Evidence-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACCAGCG CAGCTGCAGC ATCCTTTCTT GCCATAAAAA ACCCCGCGAC TCTGGTCAGA 
    GAGGGAGAGC GAGCTAGAAG CCTAGAACCG GCAGGAAGCC AGACGAGCGG AGCCACCACG 
    CGTGAGCTGC AACGTAGGCG GCGGGGGCAT GGCGGGCCGG CTGGCGGGGC GAGGCGGGAG 
    GCCGCTGCTA GGCGGAAGTG GCGGGGCGGG AAGCGGGGCG GGAGGCCGTC GATGGCGGTC 
    GTGGCGGCGC TGCTGCTGGC GTGCGCGGCG CTGCTCCTGC TCCTGGCCCT CGGCGCGCTA 
    TCGCTGCCCG GGGCCTCCGA CGGCTCCGGG GGACGCGGTG CGGGGCTCTC GCTCTCGCGC 
    CCCCGCTCGC GCTTCCGCAG ATCCGCCTTC GACTCGGGGC TAGAGACGCG TGGGGAGAAG 
    GGGGAGCCGT GGACGGAGGT GCTGTCGTGG GAGCCCCGCG CGTTCGTGTA CCACAACTTC 
    CTCTCCAAGG AAGAATGTGA CCATTTGATT TCACTGGCAA AGCCTCATAT GAAGAAGTCA 
    ACAGTAGTTG ATTCAGCAAC TGGAGGCAGC AAGGACAGCA GGGTGCGGAC AAGTTCAGGA 
    ATGTTTCTTA GAAGAGGGCA GGACAAAATT ATTCGGACAA TTGAGAAAAG GATAGCAGAT 
    TACACCTTCA TACCTGTAGA GCAGGGTGAG GGTCTTCAAG TTCTCCACTA TGAAGTTGGG 
    CAGAAGTATG AACCTCACTT TGATTACTTC CATGATGATT ACAACACCAA GAATGGAGGC 
    CAGCGTATAG CAACTCTTCT TATGTATCTT TCGGATGTTG AAGATGGTGG CGAGACTGTG 
    TTCCCTTCGT CGACAACAAA CAGCAGCTCG TCACCATTTT ATAATGAGCT GTCTGAATGT 
    GCAAAGGGTG GTCTATCTGT TAAACCAAAG ATGGGAGATG CGCTTCTGTT CTGGAGCATG 
    AAGCCTGATG GGTCCCTAGA TCCCACAAGC CTGCATGGTG GATGCCCAGT TATAAAAGGC 
    AACAAATGGT CATCGACGAA GTGGATGCGT GTTCATGAGT ACAAAGTTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001354365.1
    CDS37..1107
    Translation

    Target ORF information:

    RefSeq Version NM_001367436.1
    Organism Zea mays
    Definition Zea mays prolyl 4-hydroxylase 1 (LOC100193348), transcript variant 1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001367436.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGACCAGCG CAGCTGCAGC ATCCTTTCTT GCCATAAAAA ACCCCGCGAC TCTGGTCAGA 
    GAGGGAGAGC GAGCTAGAAG CCTAGAACCG GCAGGAAGCC AGACGAGCGG AGCCACCACG 
    CGTGAGCTGC AACGTAGGCG GCGGGGGCAT GGCGGGCCGG CTGGCGGGGC GAGGCGGGAG 
    GCCGCTGCTA GGCGGAAGTG GCGGGGCGGG AAGCGGGGCG GGAGGCCGTC GATGGCGGTC 
    GTGGCGGCGC TGCTGCTGGC GTGCGCGGCG CTGCTCCTGC TCCTGGCCCT CGGCGCGCTA 
    TCGCTGCCCG GGGCCTCCGA CGGCTCCGGG GGACGCGGTG CGGGGCTCTC GCTCTCGCGC 
    CCCCGCTCGC GCTTCCGCAG ATCCGCCTTC GACTCGGGGC TAGAGACGCG TGGGGAGAAG 
    GGGGAGCCGT GGACGGAGGT GCTGTCGTGG GAGCCCCGCG CGTTCGTGTA CCACAACTTC 
    CTCTCCAAGG AAGAATGTGA CCATTTGATT TCACTGGCAA AGCCTCATAT GAAGAAGTCA 
    ACAGTAGTTG ATTCAGCAAC TGGAGGCAGC AAGGACAGCA GGGTGCGGAC AAGTTCAGGA 
    ATGTTTCTTA GAAGAGGGCA GGACAAAATT ATTCGGACAA TTGAGAAAAG GATAGCAGAT 
    TACACCTTCA TACCTGTAGA GCAGGGTGAG GGTCTTCAAG TTCTCCACTA TGAAGTTGGG 
    CAGAAGTATG AACCTCACTT TGATTACTTC CATGATGATT ACAACACCAA GAATGGAGGC 
    CAGCGTATAG CAACTCTTCT TATGTATCTT TCGGATGTTG AAGATGGTGG CGAGACTGTG 
    TTCCCTTCGT CGACAACAAA CAGCAGCTCG TCACCATTTT ATAATGAGCT GTCTGAATGT 
    GCAAAGGGTG GTCTATCTGT TAAACCAAAG ATGGGAGATG CGCTTCTGTT CTGGAGCATG 
    AAGCCTGATG GGTCCCTAGA TCCCACAAGC CTGCATGGTG GATGCCCAGT TATAAAAGGC 
    AACAAATGGT CATCGACGAA GTGGATGCGT GTTCATGAGT ACAAAGTTTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Prolyl 4-hydroxylase genes are subjected to alternative splicing in roots of maize seedlings under waterlogging.
    Annals of botany108(7)1323-35(2011 Nov)
    Zou X,Jiang Y,Zheng Y,Zhang M,Zhang Z


    The B73 maize genome: complexity, diversity, and dynamics.
    Science (New York, N.Y.)326(5956)1112-5(2009 Nov)
    Schnable PS,Ware D,Fulton RS,Stein JC,Wei F,Pasternak S,Liang C,Zhang J,Fulton L,Graves TA,Minx P,Reily AD,Courtney L,Kruchowski SS,Tomlinson C,Strong C,Delehaunty K,Fronick C,Courtney B,Rock SM,Belter E,Du F,Kim K,Abbott RM,Cotton M,Levy A,Marchetto P,Ochoa K,Jackson SM,Gillam B,Chen W,Yan L,Higginbotham J,Cardenas M,Waligorski J,Applebaum E,Phelps L,Falcone J,Kanchi K,Thane T,Scimone A,Thane N,Henke J,Wang T,Ruppert J,Shah N,Rotter K,Hodges J,Ingenthron E,Cordes M,Kohlberg S,Sgro J,Delgado B,Mead K,Chinwalla A,Leonard S,Crouse K,Collura K,Kudrna D,Currie J,He R,Angelova A,Rajasekar S,Mueller T,Lomeli R,Scara G,Ko A,Delaney K,Wissotski M,Lopez G,Campos D,Braidotti M,Ashley E,Golser W,Kim H,Lee S,Lin J,Dujmic Z,Kim W,Talag J,Zuccolo A,Fan C,Sebastian A,Kramer M,Spiegel L,Nascimento L,Zutavern T,Miller B,Ambroise C,Muller S,Spooner W,Narechania A,Ren L,Wei S,Kumari S,Faga B,Levy MJ,McMahan L,Van Buren P,Vaughn MW,Ying K,Yeh CT,Emrich SJ,Jia Y,Kalyanaraman A,Hsia AP,Barbazuk WB,Baucom RS,Brutnell TP,Carpita NC,Chaparro C,Chia JM,Deragon JM,Estill JC,Fu Y,Jeddeloh JA,Han Y,Lee H,Li P,Lisch DR,Liu S,Liu Z,Nagel DH,McCann MC,SanMiguel P,Myers AM,Nettleton D,Nguyen J,Penning BW,Ponnala L,Schneider KL,Schwartz DC,Sharma A,Soderlund C,Springer NM,Sun Q,Wang H,Waterman M,Westerman R,Wolfgruber TK,Yang L,Yu Y,Zhang L,Zhou S,Zhu Q,Bennetzen JL,Dawe RK,Jiang J,Jiang N,Presting GG,Wessler SR,Aluru S,Martienssen RA,Clifton SW,McCombie WR,Wing RA,Wilson RK


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