| Gene Symbol | HGGT |
| Entrez Gene ID | 100232967 |
| Full Name | homogentisate geranylgeranyl transferase |
| Gene Type | protein-coding |
| Organism | Vitis vinifera(wine grape) |
IVD Raw Materials
ORF » Species Summary » Vitis vinifera » HGGT cDNA ORF clone
| Gene Symbol | HGGT |
| Entrez Gene ID | 100232967 |
| Full Name | homogentisate geranylgeranyl transferase |
| Gene Type | protein-coding |
| Organism | Vitis vinifera(wine grape) |
| mRNA | Protein | Name |
|---|---|---|
| XM_019222784.1 | XP_019078329.1 | homogentisate geranylgeranyl transferase isoform X2 |
| XM_019222787.1 | XP_019078332.1 | homogentisate geranylgeranyl transferase isoform X5 |
| XM_019222786.1 | XP_019078331.1 | homogentisate geranylgeranyl transferase isoform X4 |
| XM_019222783.1 | XP_019078328.1 | homogentisate geranylgeranyl transferase isoform X1 |
| XM_019222785.1 | XP_019078330.1 | homogentisate geranylgeranyl transferase isoform X3 |
| XM_019222788.1 | XP_019078333.1 | homogentisate geranylgeranyl transferase isoform X6 |
| NM_001280898.1 | NP_001267827.1 | homogentisate geranylgeranyl transferase |
The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome.
Da Silva C, Zamperin G, Ferrarini A, Minio A, Dal Molin A, Venturini L, Buson G, Tononi P, Avanzato C, Zago E, Boido E, Dellacassa E, Gaggero C, Pezzotti M, Carrau F, Delledonne M
The Plant cell25(12)4777-88(2013 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following HGGT gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the HGGT cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OVa22699 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001280898.1 | |
| Accession Version | NM_001280898.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1221bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1498320000000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | homogentisate geranylgeranyl transferase | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY826350.1. On Jul 24, 2013 this sequence version replaced XM_002267270.2. ##Evidence-Data-START## Transcript exon combination :: AY826350.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3598469, SAMEA3598470 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001267827.1 |
| CDS | 1..1221 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001280898.1 |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa22985 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019222786.1 | |
| Accession Version | XM_019222786.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1206bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479657600000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | homogentisate geranylgeranyl transferase isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012017.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019078331.1 |
| CDS | 294..1499 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019222786.1 |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa40768 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019222783.1 | |
| Accession Version | XM_019222783.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1287bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479657600000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | homogentisate geranylgeranyl transferase isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012017.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019078328.1 |
| CDS | 295..1581 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019222783.1 |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa40769 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019222784.1 | |
| Accession Version | XM_019222784.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1272bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479657600000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | homogentisate geranylgeranyl transferase isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012017.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019078329.1 |
| CDS | 296..1567 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019222784.1 |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa40770 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019222785.1 | |
| Accession Version | XM_019222785.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1221bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479657600000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | homogentisate geranylgeranyl transferase isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012017.3) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019078330.1 |
| CDS | 294..1514 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019222785.1 |
1 | ATGGATTCTA TGCTTATTGG GTCCTTTCCG CGACCTTGTT CCTCTTATGT TTCCAGTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa40771 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019222787.1 | |
| Accession Version | XM_019222787.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1206bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479657600000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | homogentisate geranylgeranyl transferase isoform X5 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012017.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGCAAAG AAGTTCAAGC ACAGAATAAT TTTATCTACG CTGATGACTG GAGAACTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019078332.1 |
| CDS | 16..1221 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019222787.1 |
1 | ATGGGCAAAG AAGTTCAAGC ACAGAATAAT TTTATCTACG CTGATGACTG GAGAACTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OVa40772 | |
| Clone ID Related Accession (Same CDS sequence) | XM_019222788.1 | |
| Accession Version | XM_019222788.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1191bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1479657600000 | |
| Organism | Vitis vinifera(wine grape) | |
| Product | homogentisate geranylgeranyl transferase isoform X6 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_012017.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vitis vinifera Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGGCAAAG AAGTTCAAGC ACAGAATAAT TTTATCTACG CTGATGACTG GAGAACTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_019078333.1 |
| CDS | 16..1206 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_019222788.1 |
1 | ATGGGCAAAG AAGTTCAAGC ACAGAATAAT TTTATCTACG CTGATGACTG GAGAACTGTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. |