ORF » Species Summary » Thalassiosira pseudonana CCMP1335 » THAPSDRAFT_263489 cDNA ORF clone

THAPSDRAFT_263489 cDNA ORF clone, Thalassiosira pseudonana CCMP1335

The following THAPSDRAFT_263489 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THAPSDRAFT_263489 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTf09209 XM_002292153.2
Latest version!		 Thalassiosira pseudonana CCMP1335 platelet-activating factor acetylhydrolase beta subunit-like protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    THAPSDRAFT_263489 ( XM_002292153.2 ) cDNA ORF clone, Thalassiosira pseudonana CCMP1335 -> XP_002292189.1 Thalassiosira pseudonana CCMP1335 platelet-activating factor acetylhydrolase beta subunit-like protein partial mRNA.
    Price & Availability↑
    CloneID OTf09209
    Clone ID Related Accession (Same CDS sequence) XM_002292153.2
    Accession Version XM_002292153.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1344bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1497456000000
    Organism Thalassiosira pseudonana CCMP1335
    Product platelet-activating factor acetylhydrolase beta subunit-like protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012072). On Jun 16, 2017 this sequence version replaced XM_002292153.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTACTAA CAGATCGTCA ACGCAGTGAT CTCCACGGAG GCATCTACGA ATACTTCCTC 
    TCACGAGGAT CAGACTTTGC ACAAGTTGCC GAGGCCCTAG CCAGAGCCGA TCCAGACTCT 
    TGCAAAGCAC CCGATAGCAC AGCAACTGAC GAATCCAATG GCAAAAAGAC AACCAAATCA 
    ACAACGACCC CTATCCTCGA AAAGAAATGG ACAGCCGTGC CCCGTCTCCA ACGTCGAGTA 
    TTGGAACTAG AACGTCAACT CACAGTCAAT GCCAAAATCC ACGCTCATCG CACCGGTGGC 
    GGATCCGACG GATCCAGCGC CAATCCATCC GGTGGCATTC CCGCAAGAGA ACGTCGACTG 
    TTACCCCGTC CTCCGGCCAC TCACACGCTC CAATCTCATT CGGCGGTGGT GACCACCGTG 
    AGTGTTCATC CGGTGTACAC AATGGCTGCC TCTGGATCGG AAGATGGGAC GATTAAACTG 
    TGGGATCACG AATCGGGAGA GTACCTCCGT ACGTTGAGGG GTCATACGAA CGTTGTGACG 
    TGTGTTGATT TCAGTCCCAA GGGGGGGTAT TTGGCATCCA CGTCGACTGA TTTGAGTATC 
    AAGATTTGGG ATGTCAAGGA GTTTACGTGC GTGAGGACAT TAAGGGGGCA TGATCACACC 
    ATATCGTGCG TGAGGTTCGT TCCTCCTACG GGGGCGAAGA TTGTTGTTAC GGCGAGTAGG 
    GATAGTACTG TCAAGTTTTG GGATTTGGAG ACGGGATTCT GTGATGCTAC TGTGTCAGAT 
    CACAGTGATT GGGTTCGCTG TTTGGCTAAC ACAACAACGA GTTCATTGGC GCTTGTTGCT 
    ACTTCGGGAA ATGACAGAAC AATCTACGTC TACAATGCTC ATGAGAAGCG AGAGAAGGTT 
    GCTGAGCTTC GAGGTCACGA TCACGTTGTC GAGTCACTGT CCTTCCTGTG CTCGTCATTG 
    CTACCTAAGA AGGGAAGTGC AGCCAGTCGT CCTACAACGT CTGCAGCAGA AGGAGCTTCC 
    TCATCGTGGG AATATCTCGC CAGTGGATCA AGAGACCGAA CTGTACGTTT GTGGACTGTC 
    GCCAATGGAG GATCGTGCTT GATGACGTTT AGGGCTCACG AGAATTGGGT GAGAGGTGTT 
    TTGATTCATC CGTCTGGCAA TCACATTTTA AGTTGTGGGG ACGATCGAAG TATTCGTGTG 
    TTTGATATCA AGTCAAATCG TTGTTTACGA ACAATAGAGG ACGCCCATCC ACATTTTGTT 
    ACTTCTATGG CAATGCATTA CACCCTTCCT ATCCTTGTTT CAGGTGGCGT AGATCATGCA 
    GTGAAGTGTT GGCAATTGGA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002292189.1
    CDS1..1344
    Translation

    Target ORF information:

    RefSeq Version XM_002292153.2
    Organism Thalassiosira pseudonana CCMP1335
    Definition Thalassiosira pseudonana CCMP1335 platelet-activating factor acetylhydrolase beta subunit-like protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002292153.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGTACTAA CAGATCGTCA ACGCAGTGAT CTCCACGGAG GCATCTACGA ATACTTCCTC 
    TCACGAGGAT CAGACTTTGC ACAAGTTGCC GAGGCCCTAG CCAGAGCCGA TCCAGACTCT 
    TGCAAAGCAC CCGATAGCAC AGCAACTGAC GAATCCAATG GCAAAAAGAC AACCAAATCA 
    ACAACGACCC CTATCCTCGA AAAGAAATGG ACAGCCGTGC CCCGTCTCCA ACGTCGAGTA 
    TTGGAACTAG AACGTCAACT CACAGTCAAT GCCAAAATCC ACGCTCATCG CACCGGTGGC 
    GGATCCGACG GATCCAGCGC CAATCCATCC GGTGGCATTC CCGCAAGAGA ACGTCGACTG 
    TTACCCCGTC CTCCGGCCAC TCACACGCTC CAATCTCATT CGGCGGTGGT GACCACCGTG 
    AGTGTTCATC CGGTGTACAC AATGGCTGCC TCTGGATCGG AAGATGGGAC GATTAAACTG 
    TGGGATCACG AATCGGGAGA GTACCTCCGT ACGTTGAGGG GTCATACGAA CGTTGTGACG 
    TGTGTTGATT TCAGTCCCAA GGGGGGGTAT TTGGCATCCA CGTCGACTGA TTTGAGTATC 
    AAGATTTGGG ATGTCAAGGA GTTTACGTGC GTGAGGACAT TAAGGGGGCA TGATCACACC 
    ATATCGTGCG TGAGGTTCGT TCCTCCTACG GGGGCGAAGA TTGTTGTTAC GGCGAGTAGG 
    GATAGTACTG TCAAGTTTTG GGATTTGGAG ACGGGATTCT GTGATGCTAC TGTGTCAGAT 
    CACAGTGATT GGGTTCGCTG TTTGGCTAAC ACAACAACGA GTTCATTGGC GCTTGTTGCT 
    ACTTCGGGAA ATGACAGAAC AATCTACGTC TACAATGCTC ATGAGAAGCG AGAGAAGGTT 
    GCTGAGCTTC GAGGTCACGA TCACGTTGTC GAGTCACTGT CCTTCCTGTG CTCGTCATTG 
    CTACCTAAGA AGGGAAGTGC AGCCAGTCGT CCTACAACGT CTGCAGCAGA AGGAGCTTCC 
    TCATCGTGGG AATATCTCGC CAGTGGATCA AGAGACCGAA CTGTACGTTT GTGGACTGTC 
    GCCAATGGAG GATCGTGCTT GATGACGTTT AGGGCTCACG AGAATTGGGT GAGAGGTGTT 
    TTGATTCATC CGTCTGGCAA TCACATTTTA AGTTGTGGGG ACGATCGAAG TATTCGTGTG 
    TTTGATATCA AGTCAAATCG TTGTTTACGA ACAATAGAGG ACGCCCATCC ACATTTTGTT 
    ACTTCTATGG CAATGCATTA CACCCTTCCT ATCCTTGTTT CAGGTGGCGT AGATCATGCA 
    GTGAAGTGTT GGCAATTGGA CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The Phaeodactylum genome reveals the evolutionary history of diatom genomes.
    Nature456(7219)239-44(2008 Nov)
    Bowler C,Allen AE,Badger JH,Grimwood J,Jabbari K,Kuo A,Maheswari U,Martens C,Maumus F,Otillar RP,Rayko E,Salamov A,Vandepoele K,Beszteri B,Gruber A,Heijde M,Katinka M,Mock T,Valentin K,Verret F,Berges JA,Brownlee C,Cadoret JP,Chiovitti A,Choi CJ,Coesel S,De Martino A,Detter JC,Durkin C,Falciatore A,Fournet J,Haruta M,Huysman MJ,Jenkins BD,Jiroutova K,Jorgensen RE,Joubert Y,Kaplan A,Kröger N,Kroth PG,La Roche J,Lindquist E,Lommer M,Martin-Jézéquel V,Lopez PJ,Lucas S,Mangogna M,McGinnis K,Medlin LK,Montsant A,Oudot-Le Secq MP,Napoli C,Obornik M,Parker MS,Petit JL,Porcel BM,Poulsen N,Robison M,Rychlewski L,Rynearson TA,Schmutz J,Shapiro H,Siaut M,Stanley M,Sussman MR,Taylor AR,Vardi A,von Dassow P,Vyverman W,Willis A,Wyrwicz LS,Rokhsar DS,Weissenbach J,Armbrust EV,Green BR,Van de Peer Y,Grigoriev IV


    The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism.
    Science (New York, N.Y.)306(5693)79-86(2004 Oct)
    Armbrust EV,Berges JA,Bowler C,Green BR,Martinez D,Putnam NH,Zhou S,Allen AE,Apt KE,Bechner M,Brzezinski MA,Chaal BK,Chiovitti A,Davis AK,Demarest MS,Detter JC,Glavina T,Goodstein D,Hadi MZ,Hellsten U,Hildebrand M,Jenkins BD,Jurka J,Kapitonov VV,Kröger N,Lau WW,Lane TW,Larimer FW,Lippmeier JC,Lucas S,Medina M,Montsant A,Obornik M,Parker MS,Palenik B,Pazour GJ,Richardson PM,Rynearson TA,Saito MA,Schwartz DC,Thamatrakoln K,Valentin K,Vardi A,Wilkerson FP,Rokhsar DS


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