| Gene Symbol | VSOP |
| Entrez Gene ID | 586317 |
| Full Name | voltage-gated proton channel |
| Gene Type | protein-coding |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) |
IVD Raw Materials
ORF » Species Summary » Strongylocentrotus purpuratus » VSOP cDNA ORF clone
| Gene Symbol | VSOP |
| Entrez Gene ID | 586317 |
| Full Name | voltage-gated proton channel |
| Gene Type | protein-coding |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) |
| mRNA | Protein | Name |
|---|---|---|
| XM_030990964.1 | XP_030846824.1 | voltage-gated proton channel isoform X3 |
| XM_030990963.1 | XP_030846823.1 | voltage-gated proton channel isoform X2 |
| NM_001126307.1 | NP_001119779.1 | voltage-gated proton channel |
| XM_030990962.1 | XP_030846822.1 | voltage-gated proton channel isoform X1 |
| XM_030990965.1 | XP_030846825.1 | voltage-gated proton channel isoform X3 |
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis.
Tu Q, Cameron RA, Worley KC, Gibbs RA, Davidson EH
Genome research22(10)2079-87(2012 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following VSOP gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VSOP cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSd20392 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001126307.1 | |
| Accession Version | NM_001126307.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 987bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1569600000000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | voltage-gated proton channel | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EU078907.1. On or before May 7, 2008 this sequence version replaced XM_786105.2, XM_001185427.1. ##Evidence-Data-START## Transcript exon combination :: EU078907.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01096960, SAMN01103185 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGTTTGGTT TCCGTCGTCT GAGTGACACG ACAAAGCCTT CCGAAGGCAA CGACCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001119779.1 |
| CDS | 91..1077 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001126307.1 |
1 | ATGTTTGGTT TCCGTCGTCT GAGTGACACG ACAAAGCCTT CCGAAGGCAA CGACCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd56964 | |
| Clone ID Related Accession (Same CDS sequence) | XM_030990962.1 | |
| Accession Version | XM_030990962.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1320bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1569427200000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | voltage-gated proton channel isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145605.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCGAGG GTGAAGGTGA AGGTAGGTGT GCTGTAGACT CTGGAACCAT GAAGCCTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_030846822.1 |
| CDS | 315..1634 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_030990962.1 |
1 | ATGGCCGAGG GTGAAGGTGA AGGTAGGTGT GCTGTAGACT CTGGAACCAT GAAGCCTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd56965 | |
| Clone ID Related Accession (Same CDS sequence) | XM_030990963.1 | |
| Accession Version | XM_030990963.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1281bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1569427200000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | voltage-gated proton channel isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145605.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGCCGAGG GTGAAGGTGA AGGTAGGTGT GCTGTAGACT CTGGAACCAT GAAGCCTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_030846823.1 |
| CDS | 312..1592 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_030990963.1 |
1 | ATGGCCGAGG GTGAAGGTGA AGGTAGGTGT GCTGTAGACT CTGGAACCAT GAAGCCTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd56966 | |
| Clone ID Related Accession (Same CDS sequence) | XM_030990964.1 , XM_030990965.1 | |
| Accession Version | XM_030990964.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1569427200000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | voltage-gated proton channel isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145605.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTTTGGTT TCCGTCGTCT GAGCGACACG ACAAAGCCCT CCGAAGGCAA TGATCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_030846824.1 |
| CDS | 288..1313 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_030990964.1 |
1 | ATGTTTGGTT TCCGTCGTCT GAGCGACACG ACAAAGCCCT CCGAAGGCAA TGATCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd56966 | |
| Clone ID Related Accession (Same CDS sequence) | XM_030990964.1 , XM_030990965.1 | |
| Accession Version | XM_030990965.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1026bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1569427200000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | voltage-gated proton channel isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145605.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGTTTGGTT TCCGTCGTCT GAGCGACACG ACAAAGCCCT CCGAAGGCAA TGATCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_030846825.1 |
| CDS | 178..1203 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_030990965.1 |
1 | ATGTTTGGTT TCCGTCGTCT GAGCGACACG ACAAAGCCCT CCGAAGGCAA TGATCAGCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. |