| Gene Symbol | GATAe |
| Entrez Gene ID | 408052 |
| Full Name | GATA transcription factor e |
| Gene Type | protein-coding |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) |
IVD Raw Materials
ORF » Species Summary » Strongylocentrotus purpuratus » GATAe cDNA ORF clone
| Gene Symbol | GATAe |
| Entrez Gene ID | 408052 |
| Full Name | GATA transcription factor e |
| Gene Type | protein-coding |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) |
| mRNA | Protein | Name |
|---|---|---|
| XM_011668973.1 | XP_011667275.1 | GATA transcription factor e isoform X4 |
| XM_011668972.1 | XP_011667274.1 | GATA transcription factor e isoform X3 |
| XM_011668970.1 | XP_011667272.1 | GATA transcription factor e isoform X1 |
| XM_011668971.1 | XP_011667273.1 | GATA transcription factor e isoform X2 |
| NM_001005725.1 | NP_001005725.1 | GATA transcription factor e |
| XM_011668970.2 | XP_011667272.1 | GATA transcription factor e isoform X1 |
| XM_011668971.2 | XP_011667273.1 | GATA transcription factor e isoform X2 |
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis.
Tu Q, Cameron RA, Worley KC, Gibbs RA, Davidson EH
Genome research22(10)2079-87(2012 Oct)
Exclusive developmental functions of gatae cis-regulatory modules in the Strongylocentrorus purpuratus embryo.
Lee PY, Nam J, Davidson EH
Developmental biology307(2)434-45(2007 Jul)
Strongylocentrotus purpuratus transcription factor GATA-E binds to and represses transcription at an Otx-Goosecoid cis-regulatory element within the aboral ectoderm-specific spec2a enhancer.
Kiyama T, Zhang N, Dayal S, Yun Lee P, Liang S, Villinski JT, Klein WH
Developmental biology280(2)436-47(2005 Apr)
Expression of Spgatae, the Strongylocentrotus purpuratus ortholog of vertebrate GATA4/5/6 factors.
Lee PY, Davidson EH
Gene expression patterns : GEP5(2)161-5(2004 Dec)
Origins of immunity: transcription factors and homologues of effector genes of the vertebrate immune system expressed in sea urchin coelomocytes.
Pancer Z, Rast JP, Davidson EH
Immunogenetics49(9)773-86(1999 Aug)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following GATAe gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the GATAe cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSd20206 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001005725.1 | |
| Accession Version | NM_001005725.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 1704bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1556812800000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | GATA transcription factor e | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY623814.1. ##Evidence-Data-START## Transcript exon combination :: AY623814.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN01096960, SAMN01103178 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGCCACATC AGGTCGGTGT AAGTCATCTC CAACCTGAAC ATAACAACAG TAACATCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001005725.1 |
| CDS | 96..1799 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001005725.1 |
1 | ATGCCACATC AGGTCGGTGT AAGTCATCTC CAACCTGAAC ATAACAACAG TAACATCCTA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd20628 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011668970.1 , XM_011668970.2 | |
| Accession Version | XM_011668970.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2154bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1427040000000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | GATA transcription factor e isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011975692.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011667272.1 |
| CDS | 314..2467 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011668970.1 |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd20628 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011668970.1 , XM_011668970.2 | |
| Accession Version | XM_011668970.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2154bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1569427200000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | GATA transcription factor e isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145613.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 27, 2019 this sequence version replaced XM_011668970.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011667272.1 |
| CDS | 322..2475 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011668970.2 |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd20629 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011668971.1 , XM_011668971.2 | |
| Accession Version | XM_011668971.1 | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2151bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1427040000000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | GATA transcription factor e isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011975692.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011667273.1 |
| CDS | 313..2463 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011668971.1 |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd20629 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011668971.1 , XM_011668971.2 | |
| Accession Version | XM_011668971.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2151bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1569427200000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | GATA transcription factor e isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022145613.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 27, 2019 this sequence version replaced XM_011668971.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Strongylocentrotus purpuratus Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011667273.1 |
| CDS | 322..2472 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011668971.2 |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd20630 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011668973.1 , XM_011668972.1 | |
| Accession Version | XM_011668973.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2124bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1427040000000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | GATA transcription factor e isoform X4 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011975692.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011667275.1 |
| CDS | 314..2437 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011668973.1 |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSd20630 | |
| Clone ID Related Accession (Same CDS sequence) | XM_011668973.1 , XM_011668972.1 | |
| Accession Version | XM_011668972.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 2124bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 1427040000000 | |
| Organism | Strongylocentrotus purpuratus(purple sea urchin) | |
| Product | GATA transcription factor e isoform X3 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_011975692.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Strongylocentrotus purpuratus Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_011667274.1 |
| CDS | 314..2437 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_011668972.1 |
1 | ATGGAACAGA GTGCTAGAGT TTGGGCAAGC TCGGTCGAAG CTGGACCCGT CAAGCCTGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. |
Exclusive developmental functions of gatae cis-regulatory modules in the Strongylocentrorus purpuratus embryo. |
Strongylocentrotus purpuratus transcription factor GATA-E binds to and represses transcription at an Otx-Goosecoid cis-regulatory element within the aboral ectoderm-specific spec2a enhancer. |
Expression of Spgatae, the Strongylocentrotus purpuratus ortholog of vertebrate GATA4/5/6 factors. |
Origins of immunity: transcription factors and homologues of effector genes of the vertebrate immune system expressed in sea urchin coelomocytes. |