SORBIDRAFT_02G009140 cDNA ORF clone, Sorghum bicolor(Sorghum)

Gene
Clones
gRNAs

Summary

Gene Symbol	SORBIDRAFT_02G009140
Entrez Gene ID	8057287
Full Name	putative aldehyde oxidase-like protein
Gene Type	pseudo
Organism	Sorghum bicolor(Sorghum)

mRNA and Protein(s)

mRNA	Protein	Name
XM_002459661.1	XP_002459706.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The Sorghum bicolor genome and the diversification of grasses.
Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS
Nature457(7229)551-6(2009 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following SORBIDRAFT_02G009140 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SORBIDRAFT_02G009140 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OSc01406	XM_002459661.1 Latest version!	Sorghum bicolor hypothetical protein, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

SORBIDRAFT_02G009140 ( XM_002459661.1 ) cDNA ORF clone, Sorghum bicolor(Sorghum) -> XP_002459706.1 Sorghum bicolor hypothetical protein, mRNA.

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CloneID	OSc01406
Clone ID Related Accession (Same CDS sequence)	XM_002459661.1
Accession Version	XM_002459661.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3360bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1247328000000
Organism	Sorghum bicolor(Sorghum)
Product	hypothetical protein
Comment	PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_012871). COMPLETENESS: incomplete on both ends.

ATGTCGGGGT TTCATGCTTC TCAGTGTGGC TTCTGCACTC CTGGAATGTG CATGTCTATT 
TTCACTTCCC TTATCAATGC TGACAAATCC AATAGTCCTG AACCACCAAA GGGGTTCTCA 
AAACTAAAAG TATCAGAAGC AGAAAAGGCT TTCTCTGGCA ACATGTGCAG ATGCACTGGT 
TACCGTCCAA TTGTTGATGC CTGCAAAAGT TTTGCATCAG ATGTTGACTT GGAGGATTTG 
GGCCTTAATA TATTCTGGAA GAAAGTCAAA GTGGTTGTTG GGAATACTAG CAGTGGTGTA 
CCAGGATACA AGGATCAAGA CCTCTATAGT AAGTATATTG ACATAGGAGG CATTCCAGAA 
CTTTCAAATA TCATACGGAG GGAGTCTGGC TTTGAAATTG GAGCAGCTAC ACCAATCTCT 
AGGACCATTG AGATACTTGA GGAAGAATGT GAATCTACAT CCTCTGCAAA GGGAAGCGTG 
GTTTTCAGAA AACTTGCGAA CCACATGAGC AAAGTTTCTA CACCTTTTGT TCGTAACACA 
GCTAGTATTG GAGGAAACAT AGTTTTGGCA CAAAAATTCC CATTTCCATC AGATATTGCA 
ACCATACTCC TCGGTGCTGG TGCAACAGTT TGTCTTCAGG TAGTTGCAGA ACGAAGACAA 
ATTACTTTGG AAGAGTTCCT AGAGCAGCCT CCTATAGATG CTACTACTTT ACTCCTGAGC 
ATATTTATTC CACAGTGGAT CCCAGATTCT GGGACAAAGA CAAGTTTGTT GTTTGAAACT 
TACAGAGCAG CTCCTCGTCC TCTTGGCAAT GCTGTTTCAT ATGTAAATTG TGCTTTCTTG 
GGGCATGCTT CTGTGGATGA ACAATCAGAT ACTCTTGTAT TGAGTAATCT GCGGTTGGCT 
TTTGGTGCAT ATGGAACGGA ACATGCTATT AGAGCAAAGA AGGTGGAGGA ATTCCTTACT 
GGTAAAGCAC TCACTGCTTC GGTTGTACTT GGTGCAATTC AATTACTTAG AGAAACGGTT 
GTACCAATGG AGGGAACATC ACATCCTGAA TATAGAGTCA GTGCAGCTGT TGGATTTCTC 
TTCAGTTTCC TATCTCCGCT TTCTAAATGC ATCCCAGATC CGGGAAAGTC TCTGACCAGT 
AGTTCTGCTG GTTCAGCAGA TACAGATGAT GTCCATAATC TGCCATTATC ATCACGTCGA 
GAAACATTTT CCAGTGACGA GTATAAACCA GTCGGTGAGC CGATTAAGAA GTACGGTGTT 
GAACTTCAAG CTTCAGGGGA GGCAGTATAT GTAGATGACA TTCCTGTTCC AAAGAATTGC 
CTCTATGGAG AATTTATTTA CAGCACACAA CCCCTTGCTT ATGTCAAAAG TATAAAATTC 
AAATCTTCTT TAGCATCAGA GAAGATCGTC TCTTTTGTTT CTGCAAAGGA TATTCCAAGT 
GGAGGACAAA ATATTGGATC ATCCTTCACG TTTGGTGACG AACCACTATT TGGTTATCCA 
ATTGCTGAGT ATGCTGGTCA AGCTCTAGGC ATTGTGATTG CAGAAACACA GAGATATGCT 
GACATGGCAG CCAAGCAGGT TATTATTGAA TATGACACAG AAGATTTGAG CCCAGCGATC 
ATAACTGTGG AGCAAGCAGT GGAAAAGAGT AGCTACTTTG ATGTCCCCCC AGAATTGTAT 
CCTAAAGAAG TTGGTGATGT TTCCAAGGGC ATGGCAGAAG CTGATCACAA GATCCCATCA 
ACAGAAGTAA AACTTGCCTC TGAGTACTAC TTCTACATGG AAACACAGAC AGCACTAGCA 
GTTCCAGATG AGCATAACAC TTTGGTAGTC TACAGTTCGA CACAGTACCC TGAACTTGCA 
CAAAGTGTCA TAGCAAGGTG CCTAGGTATT CCATTCAGCA ATGTGCGTGT CATTACAAGA 
AGGGTTGGAG GAGGTTTCGG TGGAAAGGCA TTCAGATCAT TCCAAGTTGC AACGGCAGCT 
GCACTCTGTG CGTACAAGTT ACAACGCCCT GTACGAATGT ACCTTAATCG CAACACTGAT 
ATGGTTATGA TTGGTGGTAG GCACCCAGTG AAAGCTCATT ATTCTGTCGG ATTCAAGTCT 
GATGGGAAAA TTACAGCCTT ACATCTAGAT TTATTAATTA ACGCTGGGAT ATCTCCAGAT 
GCAAGCCCCA TAATACCAGG CACTATTATA TCTAGTGTCA AGAAGTACAA CTGGGGTGCT 
CTGTCATTTG ACATCAAGCT CTGCAAAACA AATAATTCAT CTAAATCTGT TATGCGTGCT 
CCTGGAGATA CACAAGGCTC TCTAATTGCA GATGCTGTAA TTGAGCATGT CGCGTCTGTC 
CTGTCAGTGG ATGCGAACAG CGTGAGGGAA AAGAATTTTC ATACCTATGG CACTCTTCAG 
TTGTTCTACC CAGATAGTGC GGGTGAAGCT TCTACGTACA CATTGCATTC TATTTTTGAT 
AGGCTGGTCT CAACTTCAAG CTACCTGGAT CGAGCTGAAT CCATAAAGGA ATTTAATAGT 
AAGAACAAGT GGCGGAAACG TGGCATCTCT TGTGTACCCC TCATTTTCAA AGTAGAGCCA 
AGGCCGGCCC CAGGAAGGGT TTCTGTGCTC AATGATGGCT CCATAGTAGT CGAGGTTGGT 
GGAATTGAAA TCGGACAAGG TCTGTGGACG AAAGTACAGC AGATGACTGC TTTTGCTCTG 
GGAAAATTAT GGCCTGATGG AGGTCAAAGT CTTCTTGAGA GAGCCTCGAA AGATAATGTT 
AATTTATCTG CAAGTGCGTA CTGGGTACCT GGCCAAGTTT CTAATAAGTA CCTTAACTAT 
GGAGCTGGTA TAAGTGAGGT GGAGATTGAT CTTCTTACAG GAGCAATTAC TTTAATAAGG 
GGCGATCTTG TGTATGACTG TGGGAAGAGC TTGAACCCTG CCGTAGACTT AGGACAGATT 
GAAGGTTCCT TTATACAGGG AATTGGTTTT TTCGTATATG AAGAGTATAT TACGAACAGT 
GATGGCCTGA TGATTAGCAA CAGCACATGG GACTACAAGA TCCCAAGTGT GGACATAATC 
CCAAAGCAGT TTAATGCTGA GGTGCTGAAC ACTGGATACC ATAAGAACCG TGTGCTTTCT 
TCAAAAGCTT CTGGTGAACC TGCCTTGGTT CTTGCCTCAT CCGTTCATTG TGCACTGAGA 
GAAGCTATCC GAGCAGCGAG AGTGGGGTTT GCTAACAGCA CTGTATCTGG ATGCTCACCG 
CTGGAGTTTC AGATGGATGT CCCAGCACCA ATGACAGTGG TGAAAGAATT ATGTGGTTTA 
GATATTGTCG AGAAGTACTT AGAACGTCTA TCTACCTATG AACGTGTGGC TGGGGCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_002459706.1
CDS	1..3360
Translation	MSGFHASQCGFCTPGMCMSIFTSLINADKSNSPEPPKGFSKLKVSEAEKAFSGNMCRCTGYRPIVDACKSFASDVDLEDLGLNIFWKKVKVVVGNTSSGVPGYKDQDLYSKYIDIGGIPELSNIIRRESGFEIGAATPISRTIEILEEECESTSSAKGSVVFRKLANHMSKVSTPFVRNTASIGGNIVLAQKFPFPSDIATILLGAGATVCLQVVAERRQITLEEFLEQPPIDATTLLLSIFIPQWIPDSGTKTSLLFETYRAAPRPLGNAVSYVNCAFLGHASVDEQSDTLVLSNLRLAFGAYGTEHAIRAKKVEEFLTGKALTASVVLGAIQLLRETVVPMEGTSHPEYRVSAAVGFLFSFLSPLSKCIPDPGKSLTSSSAGSADTDDVHNLPLSSRRETFSSDEYKPVGEPIKKYGVELQASGEAVYVDDIPVPKNCLYGEFIYSTQPLAYVKSIKFKSSLASEKIVSFVSAKDIPSGGQNIGSSFTFGDEPLFGYPIAEYAGQALGIVIAETQRYADMAAKQVIIEYDTEDLSPAIITVEQAVEKSSYFDVPPELYPKEVGDVSKGMAEADHKIPSTEVKLASEYYFYMETQTALAVPDEHNTLVVYSSTQYPELAQSVIARCLGIPFSNVRVITRRVGGGFGGKAFRSFQVATAAALCAYKLQRPVRMYLNRNTDMVMIGGRHPVKAHYSVGFKSDGKITALHLDLLINAGISPDASPIIPGTIISSVKKYNWGALSFDIKLCKTNNSSKSVMRAPGDTQGSLIADAVIEHVASVLSVDANSVREKNFHTYGTLQLFYPDSAGEASTYTLHSIFDRLVSTSSYLDRAESIKEFNSKNKWRKRGISCVPLIFKVEPRPAPGRVSVLNDGSIVVEVGGIEIGQGLWTKVQQMTAFALGKLWPDGGQSLLERASKDNVNLSASAYWVPGQVSNKYLNYGAGISEVEIDLLTGAITLIRGDLVYDCGKSLNPAVDLGQIEGSFIQGIGFFVYEEYITNSDGLMISNSTWDYKIPSVDIIPKQFNAEVLNTGYHKNRVLSSKASGEPALVLASSVHCALREAIRAARVGFANSTVSGCSPLEFQMDVPAPMTVVKELCGLDIVEKYLERLSTYERVAGA

Target ORF information:

RefSeq Version	XM_002459661.1
Organism	Sorghum bicolor(Sorghum)
Definition	Sorghum bicolor hypothetical protein, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_002459661.1

ORF Insert Sequence:

ATGTCGGGGT TTCATGCTTC TCAGTGTGGC TTCTGCACTC CTGGAATGTG CATGTCTATT 
TTCACTTCCC TTATCAATGC TGACAAATCC AATAGTCCTG AACCACCAAA GGGGTTCTCA 
AAACTAAAAG TATCAGAAGC AGAAAAGGCT TTCTCTGGCA ACATGTGCAG ATGCACTGGT 
TACCGTCCAA TTGTTGATGC CTGCAAAAGT TTTGCATCAG ATGTTGACTT GGAGGATTTG 
GGCCTTAATA TATTCTGGAA GAAAGTCAAA GTGGTTGTTG GGAATACTAG CAGTGGTGTA 
CCAGGATACA AGGATCAAGA CCTCTATAGT AAGTATATTG ACATAGGAGG CATTCCAGAA 
CTTTCAAATA TCATACGGAG GGAGTCTGGC TTTGAAATTG GAGCAGCTAC ACCAATCTCT 
AGGACCATTG AGATACTTGA GGAAGAATGT GAATCTACAT CCTCTGCAAA GGGAAGCGTG 
GTTTTCAGAA AACTTGCGAA CCACATGAGC AAAGTTTCTA CACCTTTTGT TCGTAACACA 
GCTAGTATTG GAGGAAACAT AGTTTTGGCA CAAAAATTCC CATTTCCATC AGATATTGCA 
ACCATACTCC TCGGTGCTGG TGCAACAGTT TGTCTTCAGG TAGTTGCAGA ACGAAGACAA 
ATTACTTTGG AAGAGTTCCT AGAGCAGCCT CCTATAGATG CTACTACTTT ACTCCTGAGC 
ATATTTATTC CACAGTGGAT CCCAGATTCT GGGACAAAGA CAAGTTTGTT GTTTGAAACT 
TACAGAGCAG CTCCTCGTCC TCTTGGCAAT GCTGTTTCAT ATGTAAATTG TGCTTTCTTG 
GGGCATGCTT CTGTGGATGA ACAATCAGAT ACTCTTGTAT TGAGTAATCT GCGGTTGGCT 
TTTGGTGCAT ATGGAACGGA ACATGCTATT AGAGCAAAGA AGGTGGAGGA ATTCCTTACT 
GGTAAAGCAC TCACTGCTTC GGTTGTACTT GGTGCAATTC AATTACTTAG AGAAACGGTT 
GTACCAATGG AGGGAACATC ACATCCTGAA TATAGAGTCA GTGCAGCTGT TGGATTTCTC 
TTCAGTTTCC TATCTCCGCT TTCTAAATGC ATCCCAGATC CGGGAAAGTC TCTGACCAGT 
AGTTCTGCTG GTTCAGCAGA TACAGATGAT GTCCATAATC TGCCATTATC ATCACGTCGA 
GAAACATTTT CCAGTGACGA GTATAAACCA GTCGGTGAGC CGATTAAGAA GTACGGTGTT 
GAACTTCAAG CTTCAGGGGA GGCAGTATAT GTAGATGACA TTCCTGTTCC AAAGAATTGC 
CTCTATGGAG AATTTATTTA CAGCACACAA CCCCTTGCTT ATGTCAAAAG TATAAAATTC 
AAATCTTCTT TAGCATCAGA GAAGATCGTC TCTTTTGTTT CTGCAAAGGA TATTCCAAGT 
GGAGGACAAA ATATTGGATC ATCCTTCACG TTTGGTGACG AACCACTATT TGGTTATCCA 
ATTGCTGAGT ATGCTGGTCA AGCTCTAGGC ATTGTGATTG CAGAAACACA GAGATATGCT 
GACATGGCAG CCAAGCAGGT TATTATTGAA TATGACACAG AAGATTTGAG CCCAGCGATC 
ATAACTGTGG AGCAAGCAGT GGAAAAGAGT AGCTACTTTG ATGTCCCCCC AGAATTGTAT 
CCTAAAGAAG TTGGTGATGT TTCCAAGGGC ATGGCAGAAG CTGATCACAA GATCCCATCA 
ACAGAAGTAA AACTTGCCTC TGAGTACTAC TTCTACATGG AAACACAGAC AGCACTAGCA 
GTTCCAGATG AGCATAACAC TTTGGTAGTC TACAGTTCGA CACAGTACCC TGAACTTGCA 
CAAAGTGTCA TAGCAAGGTG CCTAGGTATT CCATTCAGCA ATGTGCGTGT CATTACAAGA 
AGGGTTGGAG GAGGTTTCGG TGGAAAGGCA TTCAGATCAT TCCAAGTTGC AACGGCAGCT 
GCACTCTGTG CGTACAAGTT ACAACGCCCT GTACGAATGT ACCTTAATCG CAACACTGAT 
ATGGTTATGA TTGGTGGTAG GCACCCAGTG AAAGCTCATT ATTCTGTCGG ATTCAAGTCT 
GATGGGAAAA TTACAGCCTT ACATCTAGAT TTATTAATTA ACGCTGGGAT ATCTCCAGAT 
GCAAGCCCCA TAATACCAGG CACTATTATA TCTAGTGTCA AGAAGTACAA CTGGGGTGCT 
CTGTCATTTG ACATCAAGCT CTGCAAAACA AATAATTCAT CTAAATCTGT TATGCGTGCT 
CCTGGAGATA CACAAGGCTC TCTAATTGCA GATGCTGTAA TTGAGCATGT CGCGTCTGTC 
CTGTCAGTGG ATGCGAACAG CGTGAGGGAA AAGAATTTTC ATACCTATGG CACTCTTCAG 
TTGTTCTACC CAGATAGTGC GGGTGAAGCT TCTACGTACA CATTGCATTC TATTTTTGAT 
AGGCTGGTCT CAACTTCAAG CTACCTGGAT CGAGCTGAAT CCATAAAGGA ATTTAATAGT 
AAGAACAAGT GGCGGAAACG TGGCATCTCT TGTGTACCCC TCATTTTCAA AGTAGAGCCA 
AGGCCGGCCC CAGGAAGGGT TTCTGTGCTC AATGATGGCT CCATAGTAGT CGAGGTTGGT 
GGAATTGAAA TCGGACAAGG TCTGTGGACG AAAGTACAGC AGATGACTGC TTTTGCTCTG 
GGAAAATTAT GGCCTGATGG AGGTCAAAGT CTTCTTGAGA GAGCCTCGAA AGATAATGTT 
AATTTATCTG CAAGTGCGTA CTGGGTACCT GGCCAAGTTT CTAATAAGTA CCTTAACTAT 
GGAGCTGGTA TAAGTGAGGT GGAGATTGAT CTTCTTACAG GAGCAATTAC TTTAATAAGG 
GGCGATCTTG TGTATGACTG TGGGAAGAGC TTGAACCCTG CCGTAGACTT AGGACAGATT 
GAAGGTTCCT TTATACAGGG AATTGGTTTT TTCGTATATG AAGAGTATAT TACGAACAGT 
GATGGCCTGA TGATTAGCAA CAGCACATGG GACTACAAGA TCCCAAGTGT GGACATAATC 
CCAAAGCAGT TTAATGCTGA GGTGCTGAAC ACTGGATACC ATAAGAACCG TGTGCTTTCT 
TCAAAAGCTT CTGGTGAACC TGCCTTGGTT CTTGCCTCAT CCGTTCATTG TGCACTGAGA 
GAAGCTATCC GAGCAGCGAG AGTGGGGTTT GCTAACAGCA CTGTATCTGG ATGCTCACCG 
CTGGAGTTTC AGATGGATGT CCCAGCACCA ATGACAGTGG TGAAAGAATT ATGTGGTTTA 
GATATTGTCG AGAAGTACTT AGAACGTCTA TCTACCTATG AACGTGTGGC TGGGGCGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The Sorghum bicolor genome and the diversification of grasses.
Nature457(7229)551-6(2009 Jan)
Paterson AH,Bowers JE,Bruggmann R,Dubchak I,Grimwood J,Gundlach H,Haberer G,Hellsten U,Mitros T,Poliakov A,Schmutz J,Spannagl M,Tang H,Wang X,Wicker T,Bharti AK,Chapman J,Feltus FA,Gowik U,Grigoriev IV,Lyons E,Maher CA,Martis M,Narechania A,Otillar RP,Penning BW,Salamov AA,Wang Y,Zhang L,Carpita NC,Freeling M,Gingle AR,Hash CT,Keller B,Klein P,Kresovich S,McCann MC,Ming R,Peterson DG,Mehboob-ur-Rahman,Ware D,Westhoff P,Mayer KF,Messing J,Rokhsar DS

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SORBIDRAFT_02G009140 cDNA ORF clone, Sorghum bicolor(Sorghum)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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