Trim39 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Trim39
Entrez Gene ID	309591
Full Name	tripartite motif-containing 39
Synonyms	Rnf23
General protein information	Preferred Names tripartite motif-containing 39 Names E3 ubiquitin-protein ligase TRIM39 RING finger protein 23 RING-type E3 ubiquitin transferase TRIM39 tripartite motif protein 39 tripartite motif-containing protein 39
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 20 Map Location: 20p12
Summary	contains a RING finger domain [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
XM_017601635.1	XP_017457124.1	E3 ubiquitin-protein ligase TRIM39 isoform X3
XM_017601634.1	XP_017457123.1	E3 ubiquitin-protein ligase TRIM39 isoform X2
NM_213562.1	NP_998727.1	E3 ubiquitin-protein ligase TRIM39
XM_017601633.1	XP_017457122.1	E3 ubiquitin-protein ligase TRIM39 isoform X1
XM_017601636.1	XP_017457125.1	E3 ubiquitin-protein ligase TRIM39 isoform X3

Pathways from BioSystems

Homologies

Danio rerio (zebrafish)	LOC101883816	XP_005155485.1
Canis lupus familiaris (dog)	TRIM39	XP_005627151.1
Homo sapiens (human)	TRIM39	NP_742013.1
Pan troglodytes (chimpanzee)	TRIM39	NP_001065263.1
Mus musculus (house mouse)	Trim39	NP_077788.2
Rattus norvegicus (Norway rat)	Trim39	NP_998727.1
Gallus gallus (chicken)	TRIM27.2	NP_001092829.1
Gallus gallus (chicken)	TRIM39	NP_001006196.2
Bos taurus (cattle)	TRIM39	XP_003587749.2

Gene Ontology
Bibliography

Related articles in PubMed

Systematic analysis of dimeric E3-RING interactions reveals increased combinatorial complexity in human ubiquitination networks.
Woodsmith J, Jenn RC, Sanderson CM
Molecular & cellular proteomics : MCP11(7)M111.016162(2012 Jul)

Next-generation sequencing to generate interactome datasets.
Yu H, Tardivo L, Tam S, Weiner E, Gebreab F, Fan C, Svrzikapa N, Hirozane-Kishikawa T, Rietman E, Yang X, Sahalie J, Salehi-Ashtiani K, Hao T, Cusick ME, Hill DE, Roth FP, Braun P, Vidal M
Nature methods8(6)478-80(2011 Jun)

TRIM39 is a MOAP-1-binding protein that stabilizes MOAP-1 through inhibition of its poly-ubiquitination process.
Lee SS, Fu NY, Sukumaran SK, Wan KF, Wan Q, Yu VC
Experimental cell research315(7)1313-25(2009 Apr)

The genomic sequence and comparative analysis of the rat major histocompatibility complex.
Hurt P, Walter L, Sudbrak R, Klages S, Müller I, Shiina T, Inoko H, Lehrach H, Günther E, Reinhardt R, Himmelbauer H
Genome research14(4)631-9(2004 Apr)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Trim39 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Trim39 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa42490	NM_213562.1 Latest version!	Rattus norvegicus tripartite motif-containing 39 (Trim39), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ORa60090	XM_017601633.1 Latest version!	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00
ORa60091	XM_017601634.1 Latest version!	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00
ORa60092	XM_017601636.1 Latest version!	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00
ORa60092	XM_017601635.1 Latest version!	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Trim39 ( NM_213562.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_998727.1 Rattus norvegicus tripartite motif-containing 39 (Trim39), mRNA.

Price & Availability↑

CloneID	ORa42490
Clone ID Related Accession (Same CDS sequence)	NM_213562.1
Accession Version	NM_213562.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1467bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1536854400000
Organism	Rattus norvegicus(Norway rat)
Product	E3 ubiquitin-protein ligase TRIM39
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BX883050.1. On Aug 30, 2004 this sequence version replaced XM_227954.2.

ATGGCAGAGA CAAGTCTGTT AGAGGCTGGA GCCTCTGCAG CCTCCACAGC CGCTGCTCTG 
GAGAACTTGC AGGTAGAGGC AAGCTGTTCT GTGTGCCTGG AGTACCTGAA GGAGCCGGTT 
ATCATTGAAT GTGGGCACAA CTTCTGCAAA GCGTGTATTA CCCGCTGGTG GGAGGACCTA 
GAGCGGGACT TCCCTTGCCC TGTCTGTCGG AAGACATCCC GATACCGGAG CCTCAGGCCT 
AACCGACAGC TAGGCAGCAT GGTGGAAATA GCCAAGCAGC TCCAGACGGT CAAGCGGAAG 
ATCAGAGACG AAAGCCTCTG CTCCCAGCAC CATGAACCCC TTAGCCTTTT CTGCTACGAA 
GACCAGGAGG CTGTCTGTCT GATATGTGCA ATTTCCCATA CCCACCGGGC CCATACGGTC 
GTGCCGATGG ACGATGCTAC ACAGGAGTAC AAGGAGAAAC TTCAGAAGTG CCTGGAGCCC 
CTGGAACAGA AGCTGCAGGA GATCACCTGC TGCAAAGCCT CAGAAGAAAG GAAACCAGGG 
GAACTCAAGA GACTGGTAGA GAGCCGCCGG CAGCAGATCC TAAAGGAGTT TGAGGAGCTG 
CACAGGCGAC TGGACGAGGA ACAGCAGACG CTGCTCTCCC GGCTGGAGGA GGAAGAACAG 
GACATTCTAC AGAGACTTCG AGAAAACGCT GCTCACCTTG GGGATAGGCG CCGGGACCTT 
GCCCACTTAG CTGCTGAGGT GGAGGGCAAG TGCTTACAGT CAGGCTTCGA GATGCTTAAG 
GATGTGAAAA GTACCCTAGA AAAATGTGAG AAGGTGAAGA CCATGGAGGT GACTTCAGTA 
TCTATAGAGC TGGAAAAGAA CTTCAGCCAT TTCCCCCGGC AGTACTTTGC CCTAAGGAAA 
ATTCTTAAAC AGCTAATTGC GGATGTGACC CTGGACCCTG AGACGGCTCA TCCTAACCTT 
GTCCTGTCAG AGGATCGGAA AAGTGTCAAG TTTGTGGAGA CAAGACTCCG AGACCTCCCT 
GACACACCAC AGCGTTTCAC TTTCTACCCT TGTGTCTTAG CTACTGAAGG CTTCACCTCA 
GGTCGACACT ACTGGGAGGT GGAGGTGGGT GACAAGACCC ACTGGGCAGT AGGAGTATGC 
CGGGACTCTG TGAGCAGGAA GGGTGAACTG ACTCCACTCC CGGAGACTGG CTACTGGCGT 
GTTCGGCTGT GGAATGGGGA CAAGTATGCA GCCACCACCA CGCCTTTTAC CCCTTTGCAC 
ATCAAGGTGA AACCTAAGCG GGTAGGCATA TTCCTAGACT ATGAGGCTGG CACACTGTCT 
TTTTACAACG TCACAGACCG CTCACATATC TACACCTTCA CTGATACTTT CACTGAAAAA 
CTTTGGCCCC TCTTCTACCC AGGGATCCGA GCCGGTCGGA AGAATGCTGC ACCACTTACC 
ATCAGACCCC CAACGGATTG GGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_998727.1
CDS	118..1584
Translation	MAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRAHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEERKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSHFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE

Target ORF information:

RefSeq Version	NM_213562.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus tripartite motif-containing 39 (Trim39), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_213562.1

ORF Insert Sequence:

ATGGCAGAGA CAAGTCTGTT AGAGGCTGGA GCCTCTGCAG CCTCCACAGC CGCTGCTCTG 
GAGAACTTGC AGGTAGAGGC AAGCTGTTCT GTGTGCCTGG AGTACCTGAA GGAGCCGGTT 
ATCATTGAAT GTGGGCACAA CTTCTGCAAA GCGTGTATTA CCCGCTGGTG GGAGGACCTA 
GAGCGGGACT TCCCTTGCCC TGTCTGTCGG AAGACATCCC GATACCGGAG CCTCAGGCCT 
AACCGACAGC TAGGCAGCAT GGTGGAAATA GCCAAGCAGC TCCAGACGGT CAAGCGGAAG 
ATCAGAGACG AAAGCCTCTG CTCCCAGCAC CATGAACCCC TTAGCCTTTT CTGCTACGAA 
GACCAGGAGG CTGTCTGTCT GATATGTGCA ATTTCCCATA CCCACCGGGC CCATACGGTC 
GTGCCGATGG ACGATGCTAC ACAGGAGTAC AAGGAGAAAC TTCAGAAGTG CCTGGAGCCC 
CTGGAACAGA AGCTGCAGGA GATCACCTGC TGCAAAGCCT CAGAAGAAAG GAAACCAGGG 
GAACTCAAGA GACTGGTAGA GAGCCGCCGG CAGCAGATCC TAAAGGAGTT TGAGGAGCTG 
CACAGGCGAC TGGACGAGGA ACAGCAGACG CTGCTCTCCC GGCTGGAGGA GGAAGAACAG 
GACATTCTAC AGAGACTTCG AGAAAACGCT GCTCACCTTG GGGATAGGCG CCGGGACCTT 
GCCCACTTAG CTGCTGAGGT GGAGGGCAAG TGCTTACAGT CAGGCTTCGA GATGCTTAAG 
GATGTGAAAA GTACCCTAGA AAAATGTGAG AAGGTGAAGA CCATGGAGGT GACTTCAGTA 
TCTATAGAGC TGGAAAAGAA CTTCAGCCAT TTCCCCCGGC AGTACTTTGC CCTAAGGAAA 
ATTCTTAAAC AGCTAATTGC GGATGTGACC CTGGACCCTG AGACGGCTCA TCCTAACCTT 
GTCCTGTCAG AGGATCGGAA AAGTGTCAAG TTTGTGGAGA CAAGACTCCG AGACCTCCCT 
GACACACCAC AGCGTTTCAC TTTCTACCCT TGTGTCTTAG CTACTGAAGG CTTCACCTCA 
GGTCGACACT ACTGGGAGGT GGAGGTGGGT GACAAGACCC ACTGGGCAGT AGGAGTATGC 
CGGGACTCTG TGAGCAGGAA GGGTGAACTG ACTCCACTCC CGGAGACTGG CTACTGGCGT 
GTTCGGCTGT GGAATGGGGA CAAGTATGCA GCCACCACCA CGCCTTTTAC CCCTTTGCAC 
ATCAAGGTGA AACCTAAGCG GGTAGGCATA TTCCTAGACT ATGAGGCTGG CACACTGTCT 
TTTTACAACG TCACAGACCG CTCACATATC TACACCTTCA CTGATACTTT CACTGAAAAA 
CTTTGGCCCC TCTTCTACCC AGGGATCCGA GCCGGTCGGA AGAATGCTGC ACCACTTACC 
ATCAGACCCC CAACGGATTG GGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Trim39 ( XM_017601633.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017457122.1 Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa60090
Clone ID Related Accession (Same CDS sequence)	XM_017601633.1
Accession Version	XM_017601633.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1827bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	E3 ubiquitin-protein ligase TRIM39 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGCATGC GCGGCCCTCC GTCTCCCGGG GACCGCTCCG GTCACCTGGG CGCCAGCACC 
TCAGCCACCC AACGCGGCGA GTTCCCTCTC GCCCGGTACT CGCCGTGCAG GCCCTCGCCT 
CCGGCTTCCT GCCGCCGCCC GCCACAGGCC CGACTAGGCC GGGGCACGGC GGCTCGGCGC 
CGTGCAGCTG TCTTCCATAG CCGCAGCGCG GCTTCCGCTT CCGGCGAGTA TTGTGTGTCG 
CGCCGCGGGG CGGGGGTGAG GGGAGGAGGA AGGAGGGAGG CAGTGCTCCG GCGGCTCCGC 
GCCCGGCACT CCGGGACCCG GAGCCGGGAA GTTATAATGG CAGAGACAAG TCTGTTAGAG 
GCTGGAGCCT CTGCAGCCTC CACAGCCGCT GCTCTGGAGA ACTTGCAGGT AGAGGCAAGC 
TGTTCTGTGT GCCTGGAGTA CCTGAAGGAG CCGGTTATCA TTGAATGTGG GCACAACTTC 
TGCAAAGCGT GTATTACCCG CTGGTGGGAG GACCTAGAGC GGGACTTCCC TTGCCCTGTC 
TGTCGGAAGA CATCCCGATA CCGGAGCCTC AGGCCTAACC GACAGCTAGG CAGCATGGTG 
GAAATAGCCA AGCAGCTCCA GACGGTCAAG CGGAAGATCA GAGACGAAAG CCTCTGCTCC 
CAGCACCATG AACCCCTTAG CCTTTTCTGC TACGAAGACC AGGAGGCTGT CTGTCTGATA 
TGTGCAATTT CCCATACCCA CCGGGCCCAT ACGGTCGTGC CGATGGACGA TGCTACACAG 
GAGTACAAGG AGAAACTTCA GAAGTGCCTG GAGCCCCTGG AACAGAAGCT GCAGGAGATC 
ACCTGCTGCA AAGCCTCAGA AGAAAGGAAA CCAGGGGAAC TCAAGAGACT GGTAGAGAGC 
CGCCGGCAGC AGATCCTAAA GGAGTTTGAG GAGCTGCACA GGCGACTGGA CGAGGAACAG 
CAGACGCTGC TCTCCCGGCT GGAGGAGGAA GAACAGGACA TTCTACAGAG ACTTCGAGAA 
AACGCTGCTC ACCTTGGGGA TAGGCGCCGG GACCTTGCCC ACTTAGCTGC TGAGGTGGAG 
GGCAAGTGCT TACAGTCAGG CTTCGAGATG CTTAAGGATG TGAAAAGTAC CCTAGAAAAA 
TGTGAGAAGG TGAAGACCAT GGAGGTGACT TCAGTATCTA TAGAGCTGGA AAAGAACTTC 
AGCCATTTCC CCCGGCAGTA CTTTGCCCTA AGGAAAATTC TTAAACAGCT AATTGCTCCA 
CTCTGGCTTC TTCCGCCAGC GGATGTGACC CTGGACCCTG AGACGGCTCA TCCTAACCTT 
GTCCTGTCAG AGGATCGGAA AAGTGTCAAG TTTGTGGAGA CAAGACTCCG AGACCTCCCT 
GACACACCAC AGCGTTTCAC TTTCTACCCT TGTGTCTTAG CTACTGAAGG CTTCACCTCA 
GGTCGACACT ACTGGGAGGT GGAGGTGGGT GACAAGACCC ACTGGGCAGT AGGAGTATGC 
CGGGACTCTG TGAGCAGGAA GGGTGAACTG ACTCCACTCC CGGAGACTGG CTACTGGCGT 
GTTCGGCTGT GGAATGGGGA CAAGTATGCA GCCACCACCA CGCCTTTTAC CCCTTTGCAC 
ATCAAGGTGA AACCTAAGCG GGTAGGCATA TTCCTAGACT ATGAGGCTGG CACACTGTCT 
TTTTACAACG TCACAGACCG CTCACATATC TACACCTTCA CTGATACTTT CACTGAAAAA 
CTTTGGCCCC TCTTCTACCC AGGGATCCGA GCCGGTCGGA AGAATGCTGC ACCACTTACC 
ATCAGACCCC CAACGGATTG GGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017457122.1
CDS	15..1841
Translation	MRMRGPPSPGDRSGHLGASTSATQRGEFPLARYSPCRPSPPASCRRPPQARLGRGTAARRRAAVFHSRSAASASGEYCVSRRGAGVRGGGRREAVLRRLRARHSGTRSREVIMAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRAHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEERKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSHFPRQYFALRKILKQLIAPLWLLPPADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE

Target ORF information:

RefSeq Version	XM_017601633.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017601633.1

ORF Insert Sequence:

ATGCGCATGC GCGGCCCTCC GTCTCCCGGG GACCGCTCCG GTCACCTGGG CGCCAGCACC 
TCAGCCACCC AACGCGGCGA GTTCCCTCTC GCCCGGTACT CGCCGTGCAG GCCCTCGCCT 
CCGGCTTCCT GCCGCCGCCC GCCACAGGCC CGACTAGGCC GGGGCACGGC GGCTCGGCGC 
CGTGCAGCTG TCTTCCATAG CCGCAGCGCG GCTTCCGCTT CCGGCGAGTA TTGTGTGTCG 
CGCCGCGGGG CGGGGGTGAG GGGAGGAGGA AGGAGGGAGG CAGTGCTCCG GCGGCTCCGC 
GCCCGGCACT CCGGGACCCG GAGCCGGGAA GTTATAATGG CAGAGACAAG TCTGTTAGAG 
GCTGGAGCCT CTGCAGCCTC CACAGCCGCT GCTCTGGAGA ACTTGCAGGT AGAGGCAAGC 
TGTTCTGTGT GCCTGGAGTA CCTGAAGGAG CCGGTTATCA TTGAATGTGG GCACAACTTC 
TGCAAAGCGT GTATTACCCG CTGGTGGGAG GACCTAGAGC GGGACTTCCC TTGCCCTGTC 
TGTCGGAAGA CATCCCGATA CCGGAGCCTC AGGCCTAACC GACAGCTAGG CAGCATGGTG 
GAAATAGCCA AGCAGCTCCA GACGGTCAAG CGGAAGATCA GAGACGAAAG CCTCTGCTCC 
CAGCACCATG AACCCCTTAG CCTTTTCTGC TACGAAGACC AGGAGGCTGT CTGTCTGATA 
TGTGCAATTT CCCATACCCA CCGGGCCCAT ACGGTCGTGC CGATGGACGA TGCTACACAG 
GAGTACAAGG AGAAACTTCA GAAGTGCCTG GAGCCCCTGG AACAGAAGCT GCAGGAGATC 
ACCTGCTGCA AAGCCTCAGA AGAAAGGAAA CCAGGGGAAC TCAAGAGACT GGTAGAGAGC 
CGCCGGCAGC AGATCCTAAA GGAGTTTGAG GAGCTGCACA GGCGACTGGA CGAGGAACAG 
CAGACGCTGC TCTCCCGGCT GGAGGAGGAA GAACAGGACA TTCTACAGAG ACTTCGAGAA 
AACGCTGCTC ACCTTGGGGA TAGGCGCCGG GACCTTGCCC ACTTAGCTGC TGAGGTGGAG 
GGCAAGTGCT TACAGTCAGG CTTCGAGATG CTTAAGGATG TGAAAAGTAC CCTAGAAAAA 
TGTGAGAAGG TGAAGACCAT GGAGGTGACT TCAGTATCTA TAGAGCTGGA AAAGAACTTC 
AGCCATTTCC CCCGGCAGTA CTTTGCCCTA AGGAAAATTC TTAAACAGCT AATTGCTCCA 
CTCTGGCTTC TTCCGCCAGC GGATGTGACC CTGGACCCTG AGACGGCTCA TCCTAACCTT 
GTCCTGTCAG AGGATCGGAA AAGTGTCAAG TTTGTGGAGA CAAGACTCCG AGACCTCCCT 
GACACACCAC AGCGTTTCAC TTTCTACCCT TGTGTCTTAG CTACTGAAGG CTTCACCTCA 
GGTCGACACT ACTGGGAGGT GGAGGTGGGT GACAAGACCC ACTGGGCAGT AGGAGTATGC 
CGGGACTCTG TGAGCAGGAA GGGTGAACTG ACTCCACTCC CGGAGACTGG CTACTGGCGT 
GTTCGGCTGT GGAATGGGGA CAAGTATGCA GCCACCACCA CGCCTTTTAC CCCTTTGCAC 
ATCAAGGTGA AACCTAAGCG GGTAGGCATA TTCCTAGACT ATGAGGCTGG CACACTGTCT 
TTTTACAACG TCACAGACCG CTCACATATC TACACCTTCA CTGATACTTT CACTGAAAAA 
CTTTGGCCCC TCTTCTACCC AGGGATCCGA GCCGGTCGGA AGAATGCTGC ACCACTTACC 
ATCAGACCCC CAACGGATTG GGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Trim39 ( XM_017601634.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017457123.1 Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa60091
Clone ID Related Accession (Same CDS sequence)	XM_017601634.1
Accession Version	XM_017601634.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1803bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	E3 ubiquitin-protein ligase TRIM39 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCGCATGC GCGGCCCTCC GTCTCCCGGG GACCGCTCCG GTCACCTGGG CGCCAGCACC 
TCAGCCACCC AACGCGGCGA GTTCCCTCTC GCCCGGTACT CGCCGTGCAG GCCCTCGCCT 
CCGGCTTCCT GCCGCCGCCC GCCACAGGCC CGACTAGGCC GGGGCACGGC GGCTCGGCGC 
CGTGCAGCTG TCTTCCATAG CCGCAGCGCG GCTTCCGCTT CCGGCGAGTA TTGTGTGTCG 
CGCCGCGGGG CGGGGGTGAG GGGAGGAGGA AGGAGGGAGG CAGTGCTCCG GCGGCTCCGC 
GCCCGGCACT CCGGGACCCG GAGCCGGGAA GTTATAATGG CAGAGACAAG TCTGTTAGAG 
GCTGGAGCCT CTGCAGCCTC CACAGCCGCT GCTCTGGAGA ACTTGCAGGT AGAGGCAAGC 
TGTTCTGTGT GCCTGGAGTA CCTGAAGGAG CCGGTTATCA TTGAATGTGG GCACAACTTC 
TGCAAAGCGT GTATTACCCG CTGGTGGGAG GACCTAGAGC GGGACTTCCC TTGCCCTGTC 
TGTCGGAAGA CATCCCGATA CCGGAGCCTC AGGCCTAACC GACAGCTAGG CAGCATGGTG 
GAAATAGCCA AGCAGCTCCA GACGGTCAAG CGGAAGATCA GAGACGAAAG CCTCTGCTCC 
CAGCACCATG AACCCCTTAG CCTTTTCTGC TACGAAGACC AGGAGGCTGT CTGTCTGATA 
TGTGCAATTT CCCATACCCA CCGGGCCCAT ACGGTCGTGC CGATGGACGA TGCTACACAG 
GAGTACAAGG AGAAACTTCA GAAGTGCCTG GAGCCCCTGG AACAGAAGCT GCAGGAGATC 
ACCTGCTGCA AAGCCTCAGA AGAAAGGAAA CCAGGGGAAC TCAAGAGACT GGTAGAGAGC 
CGCCGGCAGC AGATCCTAAA GGAGTTTGAG GAGCTGCACA GGCGACTGGA CGAGGAACAG 
CAGACGCTGC TCTCCCGGCT GGAGGAGGAA GAACAGGACA TTCTACAGAG ACTTCGAGAA 
AACGCTGCTC ACCTTGGGGA TAGGCGCCGG GACCTTGCCC ACTTAGCTGC TGAGGTGGAG 
GGCAAGTGCT TACAGTCAGG CTTCGAGATG CTTAAGGATG TGAAAAGTAC CCTAGAAAAA 
TGTGAGAAGG TGAAGACCAT GGAGGTGACT TCAGTATCTA TAGAGCTGGA AAAGAACTTC 
AGCCATTTCC CCCGGCAGTA CTTTGCCCTA AGGAAAATTC TTAAACAGCT AATTGCGGAT 
GTGACCCTGG ACCCTGAGAC GGCTCATCCT AACCTTGTCC TGTCAGAGGA TCGGAAAAGT 
GTCAAGTTTG TGGAGACAAG ACTCCGAGAC CTCCCTGACA CACCACAGCG TTTCACTTTC 
TACCCTTGTG TCTTAGCTAC TGAAGGCTTC ACCTCAGGTC GACACTACTG GGAGGTGGAG 
GTGGGTGACA AGACCCACTG GGCAGTAGGA GTATGCCGGG ACTCTGTGAG CAGGAAGGGT 
GAACTGACTC CACTCCCGGA GACTGGCTAC TGGCGTGTTC GGCTGTGGAA TGGGGACAAG 
TATGCAGCCA CCACCACGCC TTTTACCCCT TTGCACATCA AGGTGAAACC TAAGCGGGTA 
GGCATATTCC TAGACTATGA GGCTGGCACA CTGTCTTTTT ACAACGTCAC AGACCGCTCA 
CATATCTACA CCTTCACTGA TACTTTCACT GAAAAACTTT GGCCCCTCTT CTACCCAGGG 
ATCCGAGCCG GTCGGAAGAA TGCTGCACCA CTTACCATCA GACCCCCAAC GGATTGGGAA 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017457123.1
CDS	15..1817
Translation	MRMRGPPSPGDRSGHLGASTSATQRGEFPLARYSPCRPSPPASCRRPPQARLGRGTAARRRAAVFHSRSAASASGEYCVSRRGAGVRGGGRREAVLRRLRARHSGTRSREVIMAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRAHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEERKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSHFPRQYFALRKILKQLIADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE

Target ORF information:

RefSeq Version	XM_017601634.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017601634.1

ORF Insert Sequence:

ATGCGCATGC GCGGCCCTCC GTCTCCCGGG GACCGCTCCG GTCACCTGGG CGCCAGCACC 
TCAGCCACCC AACGCGGCGA GTTCCCTCTC GCCCGGTACT CGCCGTGCAG GCCCTCGCCT 
CCGGCTTCCT GCCGCCGCCC GCCACAGGCC CGACTAGGCC GGGGCACGGC GGCTCGGCGC 
CGTGCAGCTG TCTTCCATAG CCGCAGCGCG GCTTCCGCTT CCGGCGAGTA TTGTGTGTCG 
CGCCGCGGGG CGGGGGTGAG GGGAGGAGGA AGGAGGGAGG CAGTGCTCCG GCGGCTCCGC 
GCCCGGCACT CCGGGACCCG GAGCCGGGAA GTTATAATGG CAGAGACAAG TCTGTTAGAG 
GCTGGAGCCT CTGCAGCCTC CACAGCCGCT GCTCTGGAGA ACTTGCAGGT AGAGGCAAGC 
TGTTCTGTGT GCCTGGAGTA CCTGAAGGAG CCGGTTATCA TTGAATGTGG GCACAACTTC 
TGCAAAGCGT GTATTACCCG CTGGTGGGAG GACCTAGAGC GGGACTTCCC TTGCCCTGTC 
TGTCGGAAGA CATCCCGATA CCGGAGCCTC AGGCCTAACC GACAGCTAGG CAGCATGGTG 
GAAATAGCCA AGCAGCTCCA GACGGTCAAG CGGAAGATCA GAGACGAAAG CCTCTGCTCC 
CAGCACCATG AACCCCTTAG CCTTTTCTGC TACGAAGACC AGGAGGCTGT CTGTCTGATA 
TGTGCAATTT CCCATACCCA CCGGGCCCAT ACGGTCGTGC CGATGGACGA TGCTACACAG 
GAGTACAAGG AGAAACTTCA GAAGTGCCTG GAGCCCCTGG AACAGAAGCT GCAGGAGATC 
ACCTGCTGCA AAGCCTCAGA AGAAAGGAAA CCAGGGGAAC TCAAGAGACT GGTAGAGAGC 
CGCCGGCAGC AGATCCTAAA GGAGTTTGAG GAGCTGCACA GGCGACTGGA CGAGGAACAG 
CAGACGCTGC TCTCCCGGCT GGAGGAGGAA GAACAGGACA TTCTACAGAG ACTTCGAGAA 
AACGCTGCTC ACCTTGGGGA TAGGCGCCGG GACCTTGCCC ACTTAGCTGC TGAGGTGGAG 
GGCAAGTGCT TACAGTCAGG CTTCGAGATG CTTAAGGATG TGAAAAGTAC CCTAGAAAAA 
TGTGAGAAGG TGAAGACCAT GGAGGTGACT TCAGTATCTA TAGAGCTGGA AAAGAACTTC 
AGCCATTTCC CCCGGCAGTA CTTTGCCCTA AGGAAAATTC TTAAACAGCT AATTGCGGAT 
GTGACCCTGG ACCCTGAGAC GGCTCATCCT AACCTTGTCC TGTCAGAGGA TCGGAAAAGT 
GTCAAGTTTG TGGAGACAAG ACTCCGAGAC CTCCCTGACA CACCACAGCG TTTCACTTTC 
TACCCTTGTG TCTTAGCTAC TGAAGGCTTC ACCTCAGGTC GACACTACTG GGAGGTGGAG 
GTGGGTGACA AGACCCACTG GGCAGTAGGA GTATGCCGGG ACTCTGTGAG CAGGAAGGGT 
GAACTGACTC CACTCCCGGA GACTGGCTAC TGGCGTGTTC GGCTGTGGAA TGGGGACAAG 
TATGCAGCCA CCACCACGCC TTTTACCCCT TTGCACATCA AGGTGAAACC TAAGCGGGTA 
GGCATATTCC TAGACTATGA GGCTGGCACA CTGTCTTTTT ACAACGTCAC AGACCGCTCA 
CATATCTACA CCTTCACTGA TACTTTCACT GAAAAACTTT GGCCCCTCTT CTACCCAGGG 
ATCCGAGCCG GTCGGAAGAA TGCTGCACCA CTTACCATCA GACCCCCAAC GGATTGGGAA 
TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Trim39 ( XM_017601635.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017457124.1 Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X3, mRNA.

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CloneID	ORa60092
Clone ID Related Accession (Same CDS sequence)	XM_017601635.1 , XM_017601636.1
Accession Version	XM_017601635.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1599bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	E3 ubiquitin-protein ligase TRIM39 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAAGAT GGGGCTACAT CCGGAAGTAT GGCTTACTGG GAGCTAATGT CAGGAAACAA 
AGTAACCCTC CAACTAACAC TTCTCTCTCC CCCTGCCTCC AAGTTATAAT GGCAGAGACA 
AGTCTGTTAG AGGCTGGAGC CTCTGCAGCC TCCACAGCCG CTGCTCTGGA GAACTTGCAG 
GTAGAGGCAA GCTGTTCTGT GTGCCTGGAG TACCTGAAGG AGCCGGTTAT CATTGAATGT 
GGGCACAACT TCTGCAAAGC GTGTATTACC CGCTGGTGGG AGGACCTAGA GCGGGACTTC 
CCTTGCCCTG TCTGTCGGAA GACATCCCGA TACCGGAGCC TCAGGCCTAA CCGACAGCTA 
GGCAGCATGG TGGAAATAGC CAAGCAGCTC CAGACGGTCA AGCGGAAGAT CAGAGACGAA 
AGCCTCTGCT CCCAGCACCA TGAACCCCTT AGCCTTTTCT GCTACGAAGA CCAGGAGGCT 
GTCTGTCTGA TATGTGCAAT TTCCCATACC CACCGGGCCC ATACGGTCGT GCCGATGGAC 
GATGCTACAC AGGAGTACAA GGAGAAACTT CAGAAGTGCC TGGAGCCCCT GGAACAGAAG 
CTGCAGGAGA TCACCTGCTG CAAAGCCTCA GAAGAAAGGA AACCAGGGGA ACTCAAGAGA 
CTGGTAGAGA GCCGCCGGCA GCAGATCCTA AAGGAGTTTG AGGAGCTGCA CAGGCGACTG 
GACGAGGAAC AGCAGACGCT GCTCTCCCGG CTGGAGGAGG AAGAACAGGA CATTCTACAG 
AGACTTCGAG AAAACGCTGC TCACCTTGGG GATAGGCGCC GGGACCTTGC CCACTTAGCT 
GCTGAGGTGG AGGGCAAGTG CTTACAGTCA GGCTTCGAGA TGCTTAAGGA TGTGAAAAGT 
ACCCTAGAAA AATGTGAGAA GGTGAAGACC ATGGAGGTGA CTTCAGTATC TATAGAGCTG 
GAAAAGAACT TCAGCCATTT CCCCCGGCAG TACTTTGCCC TAAGGAAAAT TCTTAAACAG 
CTAATTGCTC CACTCTGGCT TCTTCCGCCA GCGGATGTGA CCCTGGACCC TGAGACGGCT 
CATCCTAACC TTGTCCTGTC AGAGGATCGG AAAAGTGTCA AGTTTGTGGA GACAAGACTC 
CGAGACCTCC CTGACACACC ACAGCGTTTC ACTTTCTACC CTTGTGTCTT AGCTACTGAA 
GGCTTCACCT CAGGTCGACA CTACTGGGAG GTGGAGGTGG GTGACAAGAC CCACTGGGCA 
GTAGGAGTAT GCCGGGACTC TGTGAGCAGG AAGGGTGAAC TGACTCCACT CCCGGAGACT 
GGCTACTGGC GTGTTCGGCT GTGGAATGGG GACAAGTATG CAGCCACCAC CACGCCTTTT 
ACCCCTTTGC ACATCAAGGT GAAACCTAAG CGGGTAGGCA TATTCCTAGA CTATGAGGCT 
GGCACACTGT CTTTTTACAA CGTCACAGAC CGCTCACATA TCTACACCTT CACTGATACT 
TTCACTGAAA AACTTTGGCC CCTCTTCTAC CCAGGGATCC GAGCCGGTCG GAAGAATGCT 
GCACCACTTA CCATCAGACC CCCAACGGAT TGGGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017457124.1
CDS	850..2448
Translation	MPRWGYIRKYGLLGANVRKQSNPPTNTSLSPCLQVIMAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRAHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEERKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSHFPRQYFALRKILKQLIAPLWLLPPADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE

Target ORF information:

RefSeq Version	XM_017601635.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017601635.1

ORF Insert Sequence:

ATGCCAAGAT GGGGCTACAT CCGGAAGTAT GGCTTACTGG GAGCTAATGT CAGGAAACAA 
AGTAACCCTC CAACTAACAC TTCTCTCTCC CCCTGCCTCC AAGTTATAAT GGCAGAGACA 
AGTCTGTTAG AGGCTGGAGC CTCTGCAGCC TCCACAGCCG CTGCTCTGGA GAACTTGCAG 
GTAGAGGCAA GCTGTTCTGT GTGCCTGGAG TACCTGAAGG AGCCGGTTAT CATTGAATGT 
GGGCACAACT TCTGCAAAGC GTGTATTACC CGCTGGTGGG AGGACCTAGA GCGGGACTTC 
CCTTGCCCTG TCTGTCGGAA GACATCCCGA TACCGGAGCC TCAGGCCTAA CCGACAGCTA 
GGCAGCATGG TGGAAATAGC CAAGCAGCTC CAGACGGTCA AGCGGAAGAT CAGAGACGAA 
AGCCTCTGCT CCCAGCACCA TGAACCCCTT AGCCTTTTCT GCTACGAAGA CCAGGAGGCT 
GTCTGTCTGA TATGTGCAAT TTCCCATACC CACCGGGCCC ATACGGTCGT GCCGATGGAC 
GATGCTACAC AGGAGTACAA GGAGAAACTT CAGAAGTGCC TGGAGCCCCT GGAACAGAAG 
CTGCAGGAGA TCACCTGCTG CAAAGCCTCA GAAGAAAGGA AACCAGGGGA ACTCAAGAGA 
CTGGTAGAGA GCCGCCGGCA GCAGATCCTA AAGGAGTTTG AGGAGCTGCA CAGGCGACTG 
GACGAGGAAC AGCAGACGCT GCTCTCCCGG CTGGAGGAGG AAGAACAGGA CATTCTACAG 
AGACTTCGAG AAAACGCTGC TCACCTTGGG GATAGGCGCC GGGACCTTGC CCACTTAGCT 
GCTGAGGTGG AGGGCAAGTG CTTACAGTCA GGCTTCGAGA TGCTTAAGGA TGTGAAAAGT 
ACCCTAGAAA AATGTGAGAA GGTGAAGACC ATGGAGGTGA CTTCAGTATC TATAGAGCTG 
GAAAAGAACT TCAGCCATTT CCCCCGGCAG TACTTTGCCC TAAGGAAAAT TCTTAAACAG 
CTAATTGCTC CACTCTGGCT TCTTCCGCCA GCGGATGTGA CCCTGGACCC TGAGACGGCT 
CATCCTAACC TTGTCCTGTC AGAGGATCGG AAAAGTGTCA AGTTTGTGGA GACAAGACTC 
CGAGACCTCC CTGACACACC ACAGCGTTTC ACTTTCTACC CTTGTGTCTT AGCTACTGAA 
GGCTTCACCT CAGGTCGACA CTACTGGGAG GTGGAGGTGG GTGACAAGAC CCACTGGGCA 
GTAGGAGTAT GCCGGGACTC TGTGAGCAGG AAGGGTGAAC TGACTCCACT CCCGGAGACT 
GGCTACTGGC GTGTTCGGCT GTGGAATGGG GACAAGTATG CAGCCACCAC CACGCCTTTT 
ACCCCTTTGC ACATCAAGGT GAAACCTAAG CGGGTAGGCA TATTCCTAGA CTATGAGGCT 
GGCACACTGT CTTTTTACAA CGTCACAGAC CGCTCACATA TCTACACCTT CACTGATACT 
TTCACTGAAA AACTTTGGCC CCTCTTCTAC CCAGGGATCC GAGCCGGTCG GAAGAATGCT 
GCACCACTTA CCATCAGACC CCCAACGGAT TGGGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Trim39 ( XM_017601636.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017457125.1 Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X4, mRNA.

Price & Availability↑

CloneID	ORa60092
Clone ID Related Accession (Same CDS sequence)	XM_017601635.1 , XM_017601636.1
Accession Version	XM_017601636.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1599bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	E3 ubiquitin-protein ligase TRIM39 isoform X3
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005119.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGCCAAGAT GGGGCTACAT CCGGAAGTAT GGCTTACTGG GAGCTAATGT CAGGAAACAA 
AGTAACCCTC CAACTAACAC TTCTCTCTCC CCCTGCCTCC AAGTTATAAT GGCAGAGACA 
AGTCTGTTAG AGGCTGGAGC CTCTGCAGCC TCCACAGCCG CTGCTCTGGA GAACTTGCAG 
GTAGAGGCAA GCTGTTCTGT GTGCCTGGAG TACCTGAAGG AGCCGGTTAT CATTGAATGT 
GGGCACAACT TCTGCAAAGC GTGTATTACC CGCTGGTGGG AGGACCTAGA GCGGGACTTC 
CCTTGCCCTG TCTGTCGGAA GACATCCCGA TACCGGAGCC TCAGGCCTAA CCGACAGCTA 
GGCAGCATGG TGGAAATAGC CAAGCAGCTC CAGACGGTCA AGCGGAAGAT CAGAGACGAA 
AGCCTCTGCT CCCAGCACCA TGAACCCCTT AGCCTTTTCT GCTACGAAGA CCAGGAGGCT 
GTCTGTCTGA TATGTGCAAT TTCCCATACC CACCGGGCCC ATACGGTCGT GCCGATGGAC 
GATGCTACAC AGGAGTACAA GGAGAAACTT CAGAAGTGCC TGGAGCCCCT GGAACAGAAG 
CTGCAGGAGA TCACCTGCTG CAAAGCCTCA GAAGAAAGGA AACCAGGGGA ACTCAAGAGA 
CTGGTAGAGA GCCGCCGGCA GCAGATCCTA AAGGAGTTTG AGGAGCTGCA CAGGCGACTG 
GACGAGGAAC AGCAGACGCT GCTCTCCCGG CTGGAGGAGG AAGAACAGGA CATTCTACAG 
AGACTTCGAG AAAACGCTGC TCACCTTGGG GATAGGCGCC GGGACCTTGC CCACTTAGCT 
GCTGAGGTGG AGGGCAAGTG CTTACAGTCA GGCTTCGAGA TGCTTAAGGA TGTGAAAAGT 
ACCCTAGAAA AATGTGAGAA GGTGAAGACC ATGGAGGTGA CTTCAGTATC TATAGAGCTG 
GAAAAGAACT TCAGCCATTT CCCCCGGCAG TACTTTGCCC TAAGGAAAAT TCTTAAACAG 
CTAATTGCTC CACTCTGGCT TCTTCCGCCA GCGGATGTGA CCCTGGACCC TGAGACGGCT 
CATCCTAACC TTGTCCTGTC AGAGGATCGG AAAAGTGTCA AGTTTGTGGA GACAAGACTC 
CGAGACCTCC CTGACACACC ACAGCGTTTC ACTTTCTACC CTTGTGTCTT AGCTACTGAA 
GGCTTCACCT CAGGTCGACA CTACTGGGAG GTGGAGGTGG GTGACAAGAC CCACTGGGCA 
GTAGGAGTAT GCCGGGACTC TGTGAGCAGG AAGGGTGAAC TGACTCCACT CCCGGAGACT 
GGCTACTGGC GTGTTCGGCT GTGGAATGGG GACAAGTATG CAGCCACCAC CACGCCTTTT 
ACCCCTTTGC ACATCAAGGT GAAACCTAAG CGGGTAGGCA TATTCCTAGA CTATGAGGCT 
GGCACACTGT CTTTTTACAA CGTCACAGAC CGCTCACATA TCTACACCTT CACTGATACT 
TTCACTGAAA AACTTTGGCC CCTCTTCTAC CCAGGGATCC GAGCCGGTCG GAAGAATGCT 
GCACCACTTA CCATCAGACC CCCAACGGAT TGGGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017457125.1
CDS	348..1946
Translation	MPRWGYIRKYGLLGANVRKQSNPPTNTSLSPCLQVIMAETSLLEAGASAASTAAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQTVKRKIRDESLCSQHHEPLSLFCYEDQEAVCLICAISHTHRAHTVVPMDDATQEYKEKLQKCLEPLEQKLQEITCCKASEERKPGELKRLVESRRQQILKEFEELHRRLDEEQQTLLSRLEEEEQDILQRLRENAAHLGDRRRDLAHLAAEVEGKCLQSGFEMLKDVKSTLEKCEKVKTMEVTSVSIELEKNFSHFPRQYFALRKILKQLIAPLWLLPPADVTLDPETAHPNLVLSEDRKSVKFVETRLRDLPDTPQRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDTFTEKLWPLFYPGIRAGRKNAAPLTIRPPTDWE

Target ORF information:

RefSeq Version	XM_017601636.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus tripartite motif-containing 39 (Trim39), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017601636.1

ORF Insert Sequence:

ATGCCAAGAT GGGGCTACAT CCGGAAGTAT GGCTTACTGG GAGCTAATGT CAGGAAACAA 
AGTAACCCTC CAACTAACAC TTCTCTCTCC CCCTGCCTCC AAGTTATAAT GGCAGAGACA 
AGTCTGTTAG AGGCTGGAGC CTCTGCAGCC TCCACAGCCG CTGCTCTGGA GAACTTGCAG 
GTAGAGGCAA GCTGTTCTGT GTGCCTGGAG TACCTGAAGG AGCCGGTTAT CATTGAATGT 
GGGCACAACT TCTGCAAAGC GTGTATTACC CGCTGGTGGG AGGACCTAGA GCGGGACTTC 
CCTTGCCCTG TCTGTCGGAA GACATCCCGA TACCGGAGCC TCAGGCCTAA CCGACAGCTA 
GGCAGCATGG TGGAAATAGC CAAGCAGCTC CAGACGGTCA AGCGGAAGAT CAGAGACGAA 
AGCCTCTGCT CCCAGCACCA TGAACCCCTT AGCCTTTTCT GCTACGAAGA CCAGGAGGCT 
GTCTGTCTGA TATGTGCAAT TTCCCATACC CACCGGGCCC ATACGGTCGT GCCGATGGAC 
GATGCTACAC AGGAGTACAA GGAGAAACTT CAGAAGTGCC TGGAGCCCCT GGAACAGAAG 
CTGCAGGAGA TCACCTGCTG CAAAGCCTCA GAAGAAAGGA AACCAGGGGA ACTCAAGAGA 
CTGGTAGAGA GCCGCCGGCA GCAGATCCTA AAGGAGTTTG AGGAGCTGCA CAGGCGACTG 
GACGAGGAAC AGCAGACGCT GCTCTCCCGG CTGGAGGAGG AAGAACAGGA CATTCTACAG 
AGACTTCGAG AAAACGCTGC TCACCTTGGG GATAGGCGCC GGGACCTTGC CCACTTAGCT 
GCTGAGGTGG AGGGCAAGTG CTTACAGTCA GGCTTCGAGA TGCTTAAGGA TGTGAAAAGT 
ACCCTAGAAA AATGTGAGAA GGTGAAGACC ATGGAGGTGA CTTCAGTATC TATAGAGCTG 
GAAAAGAACT TCAGCCATTT CCCCCGGCAG TACTTTGCCC TAAGGAAAAT TCTTAAACAG 
CTAATTGCTC CACTCTGGCT TCTTCCGCCA GCGGATGTGA CCCTGGACCC TGAGACGGCT 
CATCCTAACC TTGTCCTGTC AGAGGATCGG AAAAGTGTCA AGTTTGTGGA GACAAGACTC 
CGAGACCTCC CTGACACACC ACAGCGTTTC ACTTTCTACC CTTGTGTCTT AGCTACTGAA 
GGCTTCACCT CAGGTCGACA CTACTGGGAG GTGGAGGTGG GTGACAAGAC CCACTGGGCA 
GTAGGAGTAT GCCGGGACTC TGTGAGCAGG AAGGGTGAAC TGACTCCACT CCCGGAGACT 
GGCTACTGGC GTGTTCGGCT GTGGAATGGG GACAAGTATG CAGCCACCAC CACGCCTTTT 
ACCCCTTTGC ACATCAAGGT GAAACCTAAG CGGGTAGGCA TATTCCTAGA CTATGAGGCT 
GGCACACTGT CTTTTTACAA CGTCACAGAC CGCTCACATA TCTACACCTT CACTGATACT 
TTCACTGAAA AACTTTGGCC CCTCTTCTAC CCAGGGATCC GAGCCGGTCG GAAGAATGCT 
GCACCACTTA CCATCAGACC CCCAACGGAT TGGGAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Systematic analysis of dimeric E3-RING interactions reveals increased combinatorial complexity in human ubiquitination networks.
Molecular & cellular proteomics : MCP11(7)M111.016162(2012 Jul)
Woodsmith J,Jenn RC,Sanderson CM

Next-generation sequencing to generate interactome datasets.
Nature methods8(6)478-80(2011 Jun)
Yu H,Tardivo L,Tam S,Weiner E,Gebreab F,Fan C,Svrzikapa N,Hirozane-Kishikawa T,Rietman E,Yang X,Sahalie J,Salehi-Ashtiani K,Hao T,Cusick ME,Hill DE,Roth FP,Braun P,Vidal M

TRIM39 is a MOAP-1-binding protein that stabilizes MOAP-1 through inhibition of its poly-ubiquitination process.
Experimental cell research315(7)1313-25(2009 Apr)
Lee SS,Fu NY,Sukumaran SK,Wan KF,Wan Q,Yu VC

The genomic sequence and comparative analysis of the rat major histocompatibility complex.
Genome research14(4)631-9(2004 Apr)
Hurt P,Walter L,Sudbrak R,Klages S,Müller I,Shiina T,Inoko H,Lehrach H,Günther E,Reinhardt R,Himmelbauer H

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Trim39 cDNA ORF clone, Rattus norvegicus(Norway rat)

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gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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