Sncaip cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Sncaip
Entrez Gene ID	307309
Full Name	synuclein, alpha interacting protein
Synonyms	Syph1
General protein information	Preferred Names synuclein, alpha interacting protein Names synphilin-1 synuclein, alpha interacting protein (synphilin)
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 18 Map Location: 18q11

mRNA and Protein(s)

mRNA	Protein	Name
XM_006254721.3	XP_006254783.1	synphilin-1 isoform X1
XM_006254719.2	XP_006254781.1	synphilin-1 isoform X1
XM_006254720.3	XP_006254782.1	synphilin-1 isoform X1
NM_001107379.1	NP_001100849.1	synphilin-1
XM_017600945.1	XP_017456434.1	synphilin-1 isoform X2

Pathways from BioSystems

Homologies

Homo sapiens (human)	SNCAIP	NP_005451.2
Canis lupus familiaris (dog)	SNCAIP	XP_538600.3
Bos taurus (cattle)	SNCAIP	NP_001192707.1
Xenopus tropicalis (tropical clawed frog)	sncaip	NP_001005712.1
Macaca mulatta (Rhesus monkey)	SNCAIP	XP_001090698.1
Rattus norvegicus (Norway rat)	Sncaip	NP_001100849.1
Mus musculus (house mouse)	Sncaip	NP_001186082.1
Gallus gallus (chicken)	SNCAIP	XP_424409.3
Danio rerio (zebrafish)	zgc:172291	NP_001107108.1

Gene Ontology
Bibliography

Related articles in PubMed

Interaction with synphilin-1 promotes inclusion formation of alpha-synuclein: mechanistic insights and pathological implication.
Xie YY, Zhou CJ, Zhou ZR, Hong J, Che MX, Fu QS, Song AX, Lin DH, Hu HY
FASEB journal : official publication of the Federation of American Societies for Experimental Biology24(1)196-205(2010 Jan)

Synphilin-1A inhibits seven in absentia homolog (SIAH) and modulates alpha-synuclein monoubiquitylation and inclusion formation.
Szargel R, Rott R, Eyal A, Haskin J, Shani V, Balan L, Wolosker H, Engelender S
The Journal of biological chemistry284(17)11706-16(2009 Apr)

Synphilin-1A: an aggregation-prone isoform of synphilin-1 that causes neuronal death and is present in aggregates from alpha-synucleinopathy patients.
Eyal A, Szargel R, Avraham E, Liani E, Haskin J, Rott R, Engelender S
Proceedings of the National Academy of Sciences of the United States of America103(15)5917-22(2006 Apr)

Parkin mediates nonclassical, proteasomal-independent ubiquitination of synphilin-1: implications for Lewy body formation.
Lim KL, Chew KC, Tan JM, Wang C, Chung KK, Zhang Y, Tanaka Y, Smith W, Engelender S, Ross CA, Dawson VL, Dawson TM
The Journal of neuroscience : the official journal of the Society for Neuroscience25(8)2002-9(2005 Feb)

BAG5 inhibits parkin and enhances dopaminergic neuron degeneration.
Kalia SK, Lee S, Smith PD, Liu L, Crocker SJ, Thorarinsdottir TE, Glover JR, Fon EA, Park DS, Lozano AM
Neuron44(6)931-45(2004 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Sncaip gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Sncaip cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa03401	NM_001107379.1 Latest version!	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00
ORa03401	XM_006254720.3 Latest version!	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00
ORa03401	XM_006254721.3 Latest version!	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00
ORa03401	XM_006254719.2 Latest version!	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00
ORa59260	XM_017600945.1 Latest version!	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X4, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$475.30 $679.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Sncaip ( NM_001107379.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001100849.1 Rattus norvegicus synuclein, alpha interacting protein (Sncaip), mRNA.

Price & Availability↑

CloneID	ORa03401
Clone ID Related Accession (Same CDS sequence)	XM_006254721.3 , XM_006254719.2 , XM_006254720.3 , NM_001107379.1
Accession Version	NM_001107379.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2892bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1506787200000
Organism	Rattus norvegicus(Norway rat)
Product	synphilin-1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473971.1. On or before Oct 4, 2007 this sequence version replaced XM_225768.4, XM_001055030.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN04563757, SAMN04563758 [ECO:0000348] ##Evidence-Data-END##

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001100849.1
CDS	373..3264
Translation	MEAPEYLDLDEIDFSDDISYSVTSLKTIPALCRRCDSQNEDRPVSSSSWNCGVSTLITNPQKPTGIADVYSKFRPVKRVSPLKHQPETLESNESDDQKNNTVEYQKGGETDQGPQPEELSPEDGVGGLPGKGSEPSQALGELEHYDLDMDEILDVPYIKSSQQLAPLTKVTSEKRILGLCTTVNGLSAKTCPIVSAETSTPNMAPLCVLSPVKSPHLRKVPSVLRDQHKLPAEESENSPAPGKCGPAFESENHSKDFLNKVFSDPHSRKAEKSGPDCKLRPFRLQTSAAGAKPEEQVNGVSWASAQGAEERTEYLQKVRSILNIVNEGQISLLPHLAADNLDKIHDENGNNLLHVAASKGHAECLQHLTSLMGEDCLNERNAEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQSQLQQLLEAQKSEGKSLPSSPSSPSSPASRKSQWKILDADDESTGKSKLGTQEGIQVLGNLSSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQVSSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKNTPVKRVDRPRPQPIVESVENMDSAESLHLMIKKHSVASGRRFPFGMKASKSLDGHSPSPTSESSEPDLDSHCPSLGMTPPTQPSTEATQCSPDSATAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDKERGRAPQRTSESGEQMKRPFGTFRSIMESLSGNQNNNNNYQPASQLKTCTLPLTSLGRKTADAKGNPVSPASKGKNKAAMYSSCIHLPSNALVEEHLRDYARLNDIKRNTKKTYNVKHIAEPEPKELFL

Target ORF information:

RefSeq Version	NM_001107379.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001107379.1

ORF Insert Sequence:

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Sncaip ( XM_006254721.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006254783.1 Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa03401
Clone ID Related Accession (Same CDS sequence)	XM_006254721.3 , XM_006254719.2 , XM_006254720.3 , NM_001107379.1
Accession Version	XM_006254721.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2892bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	synphilin-1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006254721.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006254783.1
CDS	289..3180
Translation	MEAPEYLDLDEIDFSDDISYSVTSLKTIPALCRRCDSQNEDRPVSSSSWNCGVSTLITNPQKPTGIADVYSKFRPVKRVSPLKHQPETLESNESDDQKNNTVEYQKGGETDQGPQPEELSPEDGVGGLPGKGSEPSQALGELEHYDLDMDEILDVPYIKSSQQLAPLTKVTSEKRILGLCTTVNGLSAKTCPIVSAETSTPNMAPLCVLSPVKSPHLRKVPSVLRDQHKLPAEESENSPAPGKCGPAFESENHSKDFLNKVFSDPHSRKAEKSGPDCKLRPFRLQTSAAGAKPEEQVNGVSWASAQGAEERTEYLQKVRSILNIVNEGQISLLPHLAADNLDKIHDENGNNLLHVAASKGHAECLQHLTSLMGEDCLNERNAEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQSQLQQLLEAQKSEGKSLPSSPSSPSSPASRKSQWKILDADDESTGKSKLGTQEGIQVLGNLSSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQVSSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKNTPVKRVDRPRPQPIVESVENMDSAESLHLMIKKHSVASGRRFPFGMKASKSLDGHSPSPTSESSEPDLDSHCPSLGMTPPTQPSTEATQCSPDSATAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDKERGRAPQRTSESGEQMKRPFGTFRSIMESLSGNQNNNNNYQPASQLKTCTLPLTSLGRKTADAKGNPVSPASKGKNKAAMYSSCIHLPSNALVEEHLRDYARLNDIKRNTKKTYNVKHIAEPEPKELFL

Target ORF information:

RefSeq Version	XM_006254721.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006254721.3

ORF Insert Sequence:

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Sncaip ( XM_006254719.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006254781.1 Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X2, mRNA.

Price & Availability↑

CloneID	ORa03401
Clone ID Related Accession (Same CDS sequence)	XM_006254721.3 , XM_006254719.2 , XM_006254720.3 , NM_001107379.1
Accession Version	XM_006254719.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2892bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	synphilin-1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_006254719.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006254781.1
CDS	359..3250
Translation	MEAPEYLDLDEIDFSDDISYSVTSLKTIPALCRRCDSQNEDRPVSSSSWNCGVSTLITNPQKPTGIADVYSKFRPVKRVSPLKHQPETLESNESDDQKNNTVEYQKGGETDQGPQPEELSPEDGVGGLPGKGSEPSQALGELEHYDLDMDEILDVPYIKSSQQLAPLTKVTSEKRILGLCTTVNGLSAKTCPIVSAETSTPNMAPLCVLSPVKSPHLRKVPSVLRDQHKLPAEESENSPAPGKCGPAFESENHSKDFLNKVFSDPHSRKAEKSGPDCKLRPFRLQTSAAGAKPEEQVNGVSWASAQGAEERTEYLQKVRSILNIVNEGQISLLPHLAADNLDKIHDENGNNLLHVAASKGHAECLQHLTSLMGEDCLNERNAEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQSQLQQLLEAQKSEGKSLPSSPSSPSSPASRKSQWKILDADDESTGKSKLGTQEGIQVLGNLSSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQVSSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKNTPVKRVDRPRPQPIVESVENMDSAESLHLMIKKHSVASGRRFPFGMKASKSLDGHSPSPTSESSEPDLDSHCPSLGMTPPTQPSTEATQCSPDSATAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDKERGRAPQRTSESGEQMKRPFGTFRSIMESLSGNQNNNNNYQPASQLKTCTLPLTSLGRKTADAKGNPVSPASKGKNKAAMYSSCIHLPSNALVEEHLRDYARLNDIKRNTKKTYNVKHIAEPEPKELFL

Target ORF information:

RefSeq Version	XM_006254719.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006254719.2

ORF Insert Sequence:

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Sncaip ( XM_006254720.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006254782.1 Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa03401
Clone ID Related Accession (Same CDS sequence)	XM_006254721.3 , XM_006254719.2 , XM_006254720.3 , NM_001107379.1
Accession Version	XM_006254720.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2892bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	synphilin-1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006254720.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006254782.1
CDS	113..3004
Translation	MEAPEYLDLDEIDFSDDISYSVTSLKTIPALCRRCDSQNEDRPVSSSSWNCGVSTLITNPQKPTGIADVYSKFRPVKRVSPLKHQPETLESNESDDQKNNTVEYQKGGETDQGPQPEELSPEDGVGGLPGKGSEPSQALGELEHYDLDMDEILDVPYIKSSQQLAPLTKVTSEKRILGLCTTVNGLSAKTCPIVSAETSTPNMAPLCVLSPVKSPHLRKVPSVLRDQHKLPAEESENSPAPGKCGPAFESENHSKDFLNKVFSDPHSRKAEKSGPDCKLRPFRLQTSAAGAKPEEQVNGVSWASAQGAEERTEYLQKVRSILNIVNEGQISLLPHLAADNLDKIHDENGNNLLHVAASKGHAECLQHLTSLMGEDCLNERNAEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQSQLQQLLEAQKSEGKSLPSSPSSPSSPASRKSQWKILDADDESTGKSKLGTQEGIQVLGNLSSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQVSSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKNTPVKRVDRPRPQPIVESVENMDSAESLHLMIKKHSVASGRRFPFGMKASKSLDGHSPSPTSESSEPDLDSHCPSLGMTPPTQPSTEATQCSPDSATAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDKERGRAPQRTSESGEQMKRPFGTFRSIMESLSGNQNNNNNYQPASQLKTCTLPLTSLGRKTADAKGNPVSPASKGKNKAAMYSSCIHLPSNALVEEHLRDYARLNDIKRNTKKTYNVKHIAEPEPKELFL

Target ORF information:

RefSeq Version	XM_006254720.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006254720.3

ORF Insert Sequence:

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCGA TGTACAGCAG CTGCATTCAT 
CTTCCCTCTA ATGCGCTGGT CGAAGAGCAT CTGCGTGATT ATGCACGGCT TAATGACATC 
AAAAGAAACA CGAAGAAAAC TTACAACGTA AAGCACATTG CTGAACCAGA GCCAAAGGAA 
CTCTTCTTAT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Sncaip ( XM_017600945.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017456434.1 Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X4, mRNA.

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CloneID	ORa59260
Clone ID Related Accession (Same CDS sequence)	XM_017600945.1
Accession Version	XM_017600945.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2742bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	synphilin-1 isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005117.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCTT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017456434.1
CDS	976..3717
Translation	MEAPEYLDLDEIDFSDDISYSVTSLKTIPALCRRCDSQNEDRPVSSSSWNCGVSTLITNPQKPTGIADVYSKFRPVKRVSPLKHQPETLESNESDDQKNNTVEYQKGGETDQGPQPEELSPEDGVGGLPGKGSEPSQALGELEHYDLDMDEILDVPYIKSSQQLAPLTKVTSEKRILGLCTTVNGLSAKTCPIVSAETSTPNMAPLCVLSPVKSPHLRKVPSVLRDQHKLPAEESENSPAPGKCGPAFESENHSKDFLNKVFSDPHSRKAEKSGPDCKLRPFRLQTSAAGAKPEEQVNGVSWASAQGAEERTEYLQKVRSILNIVNEGQISLLPHLAADNLDKIHDENGNNLLHVAASKGHAECLQHLTSLMGEDCLNERNAEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQSQLQQLLEAQKSEGKSLPSSPSSPSSPASRKSQWKILDADDESTGKSKLGTQEGIQVLGNLSSRARTKGKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQVSSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKNTPVKRVDRPRPQPIVESVENMDSAESLHLMIKKHSVASGRRFPFGMKASKSLDGHSPSPTSESSEPDLDSHCPSLGMTPPTQPSTEATQCSPDSATAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKDKERGRAPQRTSESGEQMKRPFGTFRSIMESLSGNQNNNNNYQPASQLKTCTLPLTSLGRKTADAKGNPVSPASKGKNKAA

Target ORF information:

RefSeq Version	XM_017600945.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus synuclein, alpha interacting protein (Sncaip), transcript variant X4, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017600945.1

ORF Insert Sequence:

ATGGAAGCCC CTGAATATCT TGATCTGGAT GAAATCGACT TTAGTGATGA CATTTCTTAT 
TCAGTCACAT CTCTCAAGAC CATCCCAGCA CTGTGCAGAA GATGTGACTC ACAGAACGAA 
GACAGACCAG TTTCTAGCTC TAGCTGGAAT TGTGGTGTCT CAACTCTCAT TACAAACCCG 
CAAAAGCCCA CTGGAATCGC TGATGTATAC AGTAAGTTCC GCCCGGTGAA GCGAGTTTCT 
CCACTGAAAC ATCAGCCAGA GACTCTGGAG AGCAATGAAA GTGACGACCA GAAGAACAAT 
ACAGTGGAAT ACCAGAAAGG GGGGGAGACT GACCAGGGCC CCCAGCCTGA GGAGCTCAGC 
CCTGAAGATG GAGTCGGAGG CTTGCCAGGC AAGGGCTCAG AGCCCAGCCA GGCACTGGGT 
GAGCTGGAGC ACTATGACCT CGACATGGAT GAGATTCTGG ATGTGCCTTA CATTAAATCC 
AGTCAACAGC TGGCCCCGCT CACCAAGGTG ACTTCAGAAA AAAGGATTTT GGGTTTATGC 
ACAACTGTCA ATGGCCTCTC TGCCAAAACC TGCCCTATTG TAAGCGCTGA GACCTCCACA 
CCCAACATGG CTCCATTGTG TGTTCTTTCT CCTGTGAAAA GCCCTCACTT ACGGAAAGTA 
CCCAGTGTCC TCCGGGACCA GCACAAGCTC CCTGCGGAAG AATCGGAGAA CTCACCCGCT 
CCTGGTAAAT GCGGCCCTGC ATTTGAATCA GAAAACCACA GTAAGGACTT CTTAAACAAG 
GTCTTTAGTG ATCCCCATAG TCGGAAAGCT GAGAAGTCTG GGCCAGACTG CAAGCTCAGG 
CCCTTCCGCC TGCAGACCTC GGCAGCAGGA GCCAAACCAG AGGAGCAGGT CAACGGCGTG 
AGCTGGGCCA GTGCCCAAGG CGCAGAAGAA AGGACTGAGT ACCTGCAGAA AGTAAGAAGC 
ATACTGAACA TTGTGAACGA AGGGCAGATA TCGCTCTTGC CACACCTAGC TGCAGATAAT 
CTGGACAAAA TTCACGACGA GAACGGAAAC AATCTGTTAC ACGTTGCTGC ATCAAAGGGC 
CATGCGGAAT GTCTGCAGCA CCTCACGTCG CTGATGGGCG AAGACTGTCT GAATGAACGG 
AACGCAGAGC AACTGACTCC AGCGGGCCTG GCCATCAAGA ATGGTCAGCT GGAGTGTGTA 
CGCTGGATGG TGAGTGAGAC GGAAGCCATT GCGGAACTGA GTTGTTCCAA GGATTTCCCA 
AGCCTAATTC ATTACGCAGG CTGCTATGGG CAGGAAAAGA TTCTTCTGTG GCTTCTTCAG 
TTCATGCAAG AACAAGGCAT CTCATTGGAT GAAGTAGATC AGGAAGGCAA CAGTGCTGTT 
CATGTCGCTT CACAACATGG CTACCTTGGA TGCATACAGA CCCTGGTGGA GTATGGAGCA 
AATGTTACGA TGCAGAACCA CGCTGGGGAA AAGCCCTCCC AGAGTGCCGA GCGGCACGGC 
CACACCCTAT GTTCCCGGTA CCTCGTGGTG GTAGAGACCT GTATGTCACT GGCCTCACAA 
GTGGTAAAGT TGACCAAGCA GCTAAAGGAG CAGACAGTGG AGCGCGTCAC ACTGCAGAGT 
CAACTCCAAC AACTTCTGGA AGCCCAGAAA TCAGAGGGCA AGTCCCTCCC ATCTTCACCC 
AGTTCACCCT CCTCACCAGC TTCTAGAAAG TCCCAGTGGA AAATTCTAGA TGCAGATGAC 
GAGTCTACAG GCAAAAGCAA ACTGGGAACC CAGGAGGGAA TACAAGTCCT TGGAAACTTA 
TCCAGCAGGG CTAGGACCAA AGGAAAAGAC GAAGACTCTG ATAAAATCCT ACGTCAGTTA 
TTGGGGAAAG AAATATCAGA GAATGTCTGC ACCCAGGAAA AGCTGTCATT GGAATTCCAG 
GATGCTCAGG TATCCTCTAG GAATTCGAAA AAAATACCTC TAGAGAAGAG GGAACTGAAG 
CTAGCTAGAC TGCGGCAGCT GATGCAGAGA TCTTTGAGTG AATCTGACAC GGATTCAAAC 
AACTCTGAGG ACCCCAAAAA TACTCCTGTG AAAAGAGTGG ACAGACCTAG ACCACAGCCC 
ATTGTGGAAA GTGTGGAGAA TATGGACAGT GCAGAAAGCT TACACCTGAT GATAAAGAAA 
CACTCTGTGG CATCAGGACG CAGGTTTCCT TTTGGTATGA AGGCCTCCAA ATCCCTGGAT 
GGGCACAGCC CATCTCCCAC TTCAGAGAGC AGTGAACCAG ATTTGGACTC CCATTGCCCG 
AGCCTGGGAA TGACTCCTCC AACCCAACCT TCTACAGAAG CCACTCAGTG CAGTCCTGAC 
AGTGCCACTG CCCAGAAAGT TGCTACAAGC CCCAAGAGTG CCCTCAAGTC TCCATCATCC 
AAGCGCCGGA CATCCCAAAA CTCAAAACTG AGAGTGACCT TTGAGGAGCC TGTTGTGCAA 
ATGGAGCAAA CTAGCCTTGA ACTAAATGGA GAAAAAGACA AAGAGAGGGG CAGGGCCCCC 
CAGAGGACTA GTGAGTCAGG AGAACAAATG AAAAGGCCTT TTGGAACCTT CCGATCCATC 
ATGGAGAGTT TAAGTGGTAA TCAGAACAAC AATAATAACT ACCAGCCAGC CAGCCAGCTG 
AAGACCTGCA CACTACCCTT GACGTCACTT GGAAGGAAGA CAGCAGATGC CAAGGGAAAC 
CCTGTGAGCC CTGCTAGCAA AGGAAAGAAT AAGGCAGCTT AA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Interaction with synphilin-1 promotes inclusion formation of alpha-synuclein: mechanistic insights and pathological implication.
FASEB journal : official publication of the Federation of American Societies for Experimental Biology24(1)196-205(2010 Jan)
Xie YY,Zhou CJ,Zhou ZR,Hong J,Che MX,Fu QS,Song AX,Lin DH,Hu HY

Synphilin-1A inhibits seven in absentia homolog (SIAH) and modulates alpha-synuclein monoubiquitylation and inclusion formation.
The Journal of biological chemistry284(17)11706-16(2009 Apr)
Szargel R,Rott R,Eyal A,Haskin J,Shani V,Balan L,Wolosker H,Engelender S

Synphilin-1A: an aggregation-prone isoform of synphilin-1 that causes neuronal death and is present in aggregates from alpha-synucleinopathy patients.
Proceedings of the National Academy of Sciences of the United States of America103(15)5917-22(2006 Apr)
Eyal A,Szargel R,Avraham E,Liani E,Haskin J,Rott R,Engelender S

Parkin mediates nonclassical, proteasomal-independent ubiquitination of synphilin-1: implications for Lewy body formation.
The Journal of neuroscience : the official journal of the Society for Neuroscience25(8)2002-9(2005 Feb)
Lim KL,Chew KC,Tan JM,Wang C,Chung KK,Zhang Y,Tanaka Y,Smith W,Engelender S,Ross CA,Dawson VL,Dawson TM

BAG5 inhibits parkin and enhances dopaminergic neuron degeneration.
Neuron44(6)931-45(2004 Dec)
Kalia SK,Lee S,Smith PD,Liu L,Crocker SJ,Thorarinsdottir TE,Glover JR,Fon EA,Park DS,Lozano AM

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Sncaip cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

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gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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