Tspy1 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Tspy1
Entrez Gene ID	25223
Full Name	testis specific protein, Y-linked 1
Synonyms	Tspy
General protein information	Preferred Names testis specific protein, Y-linked 1 Names testis-specific Y-encoded protein 1 Testis specific protein on Y rTSPY testis-specific protein TSPY
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: Y Map Location: Yq11
Summary	Y-specific gene with no evident X counterpart; may play a role in spermatogenesis; mouse homolog is non-functional, producing only low levels of aberrantly spliced transcripts [RGD, Feb 2006].

mRNA and Protein(s)

mRNA	Protein	Name
XM_008773672.2	XP_008771894.1	testis-specific Y-encoded protein 1 isoform X1
NM_022923.1	NP_075212.1	testis-specific Y-encoded protein 1

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

The Y-encoded TSPY protein: a significant marker potentially plays a role in the pathogenesis of testicular germ cell tumors.
Li Y, Tabatabai ZL, Lee TL, Hatakeyama S, Ohyama C, Chan WY, Looijenga LH, Lau YF
Human pathology38(10)1470-81(2007 Oct)

The rat Tspy is preferentially expressed in elongated spermatids and interacts with the core histones.
Kido T, Lau YF
Biochemical and biophysical research communications350(1)56-67(2006 Nov)

Detection of recurrent copy number loss at Yp11.2 involving TSPY gene cluster in prostate cancer using array-based comparative genomic hybridization.
Vijayakumar S, Hall DC, Reveles XT, Troyer DA, Thompson IM, Garcia D, Xiang R, Leach RJ, Johnson-Pais TL, Naylor SL
Cancer research66(8)4055-64(2006 Apr)

TSPY is a cancer testis antigen expressed in human hepatocellular carcinoma.
Yin YH, Li YY, Qiao H, Wang HC, Yang XA, Zhang HG, Pang XW, Zhang Y, Chen WF
British journal of cancer93(4)458-63(2005 Aug)

Organization and expression of rat Tspy.
Dechend F, Schubert S, Nanda I, Vogel T, Schmid M, Schmidtke J
Cytogenetics and cell genetics83(3-4)270-4(1998)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Tspy1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Tspy1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa13407	NM_022923.1 Latest version!	Rattus norvegicus testis specific protein, Y-linked 1 (Tspy1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00
ORa43031	XM_008773672.2 Latest version!	Rattus norvegicus testis specific protein, Y-linked 1 (Tspy1), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$223.30 $319.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Tspy1 ( NM_022923.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_075212.1 Rattus norvegicus testis specific protein, Y-linked 1 (Tspy1), mRNA.

Price & Availability↑

CloneID	ORa13407
Clone ID Related Accession (Same CDS sequence)	NM_022923.1
Accession Version	NM_022923.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1005bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1569168000000
Organism	Rattus norvegicus(Norway rat)
Product	testis-specific Y-encoded protein 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AF074880.1. ##Evidence-Data-START## Transcript exon combination :: AF074880.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2689604, SAMN02642708 [ECO:0000348] ##Evidence-Data-END##

ATGGAGAATT CTGAGGAGGA GAGTGTGGGC GTGGCTCCCC AGGAATTCCG GGAACTGGTA 
CTCCTGGAAA GCAGCCTTCT GGAGGGAGAG CCCTCAGTAC AGGCACCAGA GCAGAGCCCA 
GGTGCTCCTG CTGGGGACAA CCAGATGGTG AAGCCTCTGG TAATATGTGG TCCTGTGGAA 
GATTGGGTAC CCCTTGCAGA GGTGCTACAT CACCCTGACA CGTGTGAAGA GGGTGACGAG 
GCTACTATGG CGGAGTTGAA AGTCACAGAG GTGGTAGATG TCAAGAATGA GGGTGAAGAG 
GTAAAGGATC AGAAACAGGA AGGTGAACAA GATCAGCAGC CTGAGCTGGA AAAGAACCCA 
GAGCAAGCCT GTGATTCTAA AGATCAGCAA GGGATACAAA GGCTTCCACT GTCAGGTGGC 
GGGCCTGCAG AACGCAGATC TAAAATGGAG GAGCTGGAAC TTCTTCAACT GGAGCTCAGC 
TTTGTGAATG CCCGCTGTAG CGGAGCTTTT GCCCGGATTA AAGCAAAAGT GGCCAAAATG 
CGCAGACCTC ACTTTGATCG CAGAAAGACC ATAATCCAGG GCATTCCAGG CTTCTGGGCT 
AAAGCTATGA TGAACCATCC CCAGATGTCC TCCATCATCA GCAACCAAGA TGAAGACTTA 
CTGAGCTACA TGTTGAGCTT GGAGGTGGAG GAGTACAATC CTGGGTTGAG GATGTGCAGG 
ATGATGTTTT TCTTTAGTGA AAACCCATAC TTCCGGAATG ACATTGTCAC TAAGGATTAT 
CAACTCAGCA TCATTGGATA CAAAGAGTCA GATTCGAGTA CAATAGAGTG GATTGGACAG 
GCTGAGCATG GTTATGCCAA CTGCATGCAA GACACTACCA GACTCACTTT CTTCAACTGG 
CTGTGTGCAC ACAANTTCCC TGGCTCCAAC AGGATTGCTG AGATAATCAT GGATGACTTG 
TGGCCAAATC CTCTTTACTA CTACCCTAAG GAAGACCACT CATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_075212.1
CDS	104..1108
Translation	MENSEEESVGVAPQEFRELVLLESSLLEGEPSVQAPEQSPGAPAGDNQMVKPLVICGPVEDWVPLAEVLHHPDTCEEGDEATMAELKVTEVVDVKNEGEEVKDQKQEGEQDQQPELEKNPEQACDSKDQQGIQRLPLSGGGPAERRSKMEELELLQLELSFVNARCSGAFARIKAKVAKMRRPHFDRRKTIIQGIPGFWAKAMMNHPQMSSIISNQDEDLLSYMLSLEVEEYNPGLRMCRMMFFFSENPYFRNDIVTKDYQLSIIGYKESDSSTIEWIGQAEHGYANCMQDTTRLTFFNWLCAHnullFPGSNRIAEIIMDDLWPNPLYYYPKEDHS

Target ORF information:

RefSeq Version	NM_022923.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus testis specific protein, Y-linked 1 (Tspy1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_022923.1

ORF Insert Sequence:

ATGGAGAATT CTGAGGAGGA GAGTGTGGGC GTGGCTCCCC AGGAATTCCG GGAACTGGTA 
CTCCTGGAAA GCAGCCTTCT GGAGGGAGAG CCCTCAGTAC AGGCACCAGA GCAGAGCCCA 
GGTGCTCCTG CTGGGGACAA CCAGATGGTG AAGCCTCTGG TAATATGTGG TCCTGTGGAA 
GATTGGGTAC CCCTTGCAGA GGTGCTACAT CACCCTGACA CGTGTGAAGA GGGTGACGAG 
GCTACTATGG CGGAGTTGAA AGTCACAGAG GTGGTAGATG TCAAGAATGA GGGTGAAGAG 
GTAAAGGATC AGAAACAGGA AGGTGAACAA GATCAGCAGC CTGAGCTGGA AAAGAACCCA 
GAGCAAGCCT GTGATTCTAA AGATCAGCAA GGGATACAAA GGCTTCCACT GTCAGGTGGC 
GGGCCTGCAG AACGCAGATC TAAAATGGAG GAGCTGGAAC TTCTTCAACT GGAGCTCAGC 
TTTGTGAATG CCCGCTGTAG CGGAGCTTTT GCCCGGATTA AAGCAAAAGT GGCCAAAATG 
CGCAGACCTC ACTTTGATCG CAGAAAGACC ATAATCCAGG GCATTCCAGG CTTCTGGGCT 
AAAGCTATGA TGAACCATCC CCAGATGTCC TCCATCATCA GCAACCAAGA TGAAGACTTA 
CTGAGCTACA TGTTGAGCTT GGAGGTGGAG GAGTACAATC CTGGGTTGAG GATGTGCAGG 
ATGATGTTTT TCTTTAGTGA AAACCCATAC TTCCGGAATG ACATTGTCAC TAAGGATTAT 
CAACTCAGCA TCATTGGATA CAAAGAGTCA GATTCGAGTA CAATAGAGTG GATTGGACAG 
GCTGAGCATG GTTATGCCAA CTGCATGCAA GACACTACCA GACTCACTTT CTTCAACTGG 
CTGTGTGCAC ACAANTTCCC TGGCTCCAAC AGGATTGCTG AGATAATCAT GGATGACTTG 
TGGCCAAATC CTCTTTACTA CTACCCTAAG GAAGACCACT CATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Tspy1 ( XM_008773672.2 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_008771894.1 Rattus norvegicus testis specific protein, Y-linked 1 (Tspy1), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa43031
Clone ID Related Accession (Same CDS sequence)	XM_008773672.2
Accession Version	XM_008773672.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1005bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1469376000000
Organism	Rattus norvegicus(Norway rat)
Product	testis-specific Y-encoded protein 1 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024475.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_008773672.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGGAGAATT CTGAGGAGGA GAGTGTGGGC GTGGCTCCCC AGGAATTCCG GGAACTGGTA 
CTCCTGGAAA GCAGCCTTCT GGAGGGAGAG CCCTCAGTAC AGGCACCAGA GCAGAGCCCA 
GGTGCTCCTG CTGGGGACAA CCAGATGGTG AAGCCTCTGG TAATATGTGG TCCTGTGGAA 
GATTGGGTAC CCCTTGCAGA GGTGCTACAT CACCCTGACA CGTGTGAAGA GGGTGACGAG 
GCTACTATGG CGGAGTTGAA AGTCACAGAG GTGGTAGATG TCAAGAATGA GGGTGAAGAG 
GTAAAGGATC AGAAACAGGA AGGTGAACAA GATCAGCAGC CTGAGCTGGA AAAGAACCCA 
GAGCAAGCCT GTGATTCTAA AGATCAGCAA GGGATACAAA GGCTTCCACT GTCAGGTGGC 
GGGCCTGCAG AACGCAGATC TAAAATGGAG GAGCTGGAAC TTCTTCAACT GGAGCTCAGC 
TTTGTGAATG CCCGCTGTAG CGGAGCTTTT GCCCGGATTA AAGCAAAAGT GGCCAAAATG 
CGCAGACCTC ACTTTGATCG CAGAAAGACC ATAATCCAGG GCATTCCAGG CTTCTGGGCT 
AAAGCTATGA TGAACCATCC CCAGATGTCC TCCATCATCA GCAACCAAGA TGAAGACTTA 
CTGAGCTACA TGTTGAGCTT GGAGGTGGAG GAGTACAATC CTGGGTTGAG GATGTGCAGG 
ATGATGTTTT TCTTTAGTGA AAACCCATAC TTCCGGAATG ACATTGTCAC TAAGGATTAT 
CAACTCAGCA TCATTGGATA CAAAGAGTCA GATTCGAGTA CAATAGAGTG GATTGGACAG 
GCTGAGCATG GTTATGCCAA CTGCATGCAA GACACTACCA GACTCACTTT CTTCAACTGG 
CTGTGTGCAC ACAAATTCCC TGGCTCCAAC AGGATTGCTG AGATAATCAT GGATGACTTG 
TGGCCAAATC CTCTTTACTA CTACCCTAAG GAAGACCACT CATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_008771894.1
CDS	111..1115
Translation	MENSEEESVGVAPQEFRELVLLESSLLEGEPSVQAPEQSPGAPAGDNQMVKPLVICGPVEDWVPLAEVLHHPDTCEEGDEATMAELKVTEVVDVKNEGEEVKDQKQEGEQDQQPELEKNPEQACDSKDQQGIQRLPLSGGGPAERRSKMEELELLQLELSFVNARCSGAFARIKAKVAKMRRPHFDRRKTIIQGIPGFWAKAMMNHPQMSSIISNQDEDLLSYMLSLEVEEYNPGLRMCRMMFFFSENPYFRNDIVTKDYQLSIIGYKESDSSTIEWIGQAEHGYANCMQDTTRLTFFNWLCAHKFPGSNRIAEIIMDDLWPNPLYYYPKEDHS

Target ORF information:

RefSeq Version	XM_008773672.2
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus testis specific protein, Y-linked 1 (Tspy1), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_008773672.2

ORF Insert Sequence:

ATGGAGAATT CTGAGGAGGA GAGTGTGGGC GTGGCTCCCC AGGAATTCCG GGAACTGGTA 
CTCCTGGAAA GCAGCCTTCT GGAGGGAGAG CCCTCAGTAC AGGCACCAGA GCAGAGCCCA 
GGTGCTCCTG CTGGGGACAA CCAGATGGTG AAGCCTCTGG TAATATGTGG TCCTGTGGAA 
GATTGGGTAC CCCTTGCAGA GGTGCTACAT CACCCTGACA CGTGTGAAGA GGGTGACGAG 
GCTACTATGG CGGAGTTGAA AGTCACAGAG GTGGTAGATG TCAAGAATGA GGGTGAAGAG 
GTAAAGGATC AGAAACAGGA AGGTGAACAA GATCAGCAGC CTGAGCTGGA AAAGAACCCA 
GAGCAAGCCT GTGATTCTAA AGATCAGCAA GGGATACAAA GGCTTCCACT GTCAGGTGGC 
GGGCCTGCAG AACGCAGATC TAAAATGGAG GAGCTGGAAC TTCTTCAACT GGAGCTCAGC 
TTTGTGAATG CCCGCTGTAG CGGAGCTTTT GCCCGGATTA AAGCAAAAGT GGCCAAAATG 
CGCAGACCTC ACTTTGATCG CAGAAAGACC ATAATCCAGG GCATTCCAGG CTTCTGGGCT 
AAAGCTATGA TGAACCATCC CCAGATGTCC TCCATCATCA GCAACCAAGA TGAAGACTTA 
CTGAGCTACA TGTTGAGCTT GGAGGTGGAG GAGTACAATC CTGGGTTGAG GATGTGCAGG 
ATGATGTTTT TCTTTAGTGA AAACCCATAC TTCCGGAATG ACATTGTCAC TAAGGATTAT 
CAACTCAGCA TCATTGGATA CAAAGAGTCA GATTCGAGTA CAATAGAGTG GATTGGACAG 
GCTGAGCATG GTTATGCCAA CTGCATGCAA GACACTACCA GACTCACTTT CTTCAACTGG 
CTGTGTGCAC ACAAATTCCC TGGCTCCAAC AGGATTGCTG AGATAATCAT GGATGACTTG 
TGGCCAAATC CTCTTTACTA CTACCCTAAG GAAGACCACT CATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

The Y-encoded TSPY protein: a significant marker potentially plays a role in the pathogenesis of testicular germ cell tumors.
Human pathology38(10)1470-81(2007 Oct)
Li Y,Tabatabai ZL,Lee TL,Hatakeyama S,Ohyama C,Chan WY,Looijenga LH,Lau YF

The rat Tspy is preferentially expressed in elongated spermatids and interacts with the core histones.
Biochemical and biophysical research communications350(1)56-67(2006 Nov)
Kido T,Lau YF

Detection of recurrent copy number loss at Yp11.2 involving TSPY gene cluster in prostate cancer using array-based comparative genomic hybridization.
Cancer research66(8)4055-64(2006 Apr)
Vijayakumar S,Hall DC,Reveles XT,Troyer DA,Thompson IM,Garcia D,Xiang R,Leach RJ,Johnson-Pais TL,Naylor SL

TSPY is a cancer testis antigen expressed in human hepatocellular carcinoma.
British journal of cancer93(4)458-63(2005 Aug)
Yin YH,Li YY,Qiao H,Wang HC,Yang XA,Zhang HG,Pang XW,Zhang Y,Chen WF

Organization and expression of rat Tspy.
Cytogenetics and cell genetics83(3-4)270-4(1998)
Dechend F,Schubert S,Nanda I,Vogel T,Schmid M,Schmidtke J

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Tspy1 cDNA ORF clone, Rattus norvegicus(Norway rat)

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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