ORF » Species Summary » Populus trichocarpa » LOC7493542 cDNA ORF clone

LOC7493542 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7493542 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7493542 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa10303 XM_002305160.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0004s08970g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa427999 XM_002305160.3
Latest version!		 Populus trichocarpa geranylgeranyl pyrophosphate synthase, chloroplastic (LOC7493542), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7493542 ( XM_002305160.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002305196.2 Populus trichocarpa hypothetical protein (POPTR_0004s08970g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa10303
    Clone ID Related Accession (Same CDS sequence) XM_002305160.2
    Accession Version XM_002305160.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1098bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). On Dec 16, 2013 this sequence version replaced XM_002305160.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCCTTCT CTACAACAAT CTCTTTCTAT GACAATTCGC TTCTCCTCAA AAAACCCATC 
    AATGGCCTCA TAAACAACCA GCCGAGAACC CCATTAGGCC ACCTCAAATT TGCGCCCTTG 
    AAAATTCAAG CCACCTATGT TGCAAGCCCA TCTTTCAAAC AGTCATTTCA ATCCCAAGAA 
    GTGGGCAACA AGTCACAGAA GGTCCCTTTG CCAGCATTCG AATTTAAGGA GTACATGATC 
    AACAAGGCAA ATCAAGTGAA CAAAGCACTA GATGAGGCAG TACCCTTGCA ACATCCCCAG 
    AAAATCAATG AAGCCATGAG ATATTCTCTG CTCGCGGGTG GAAAGCGTGT ACGTCCAATT 
    TTATGCATTG CTTCGTGTGA ATTAGTGGGA GGAGATGAGG GGTTAGCAAT GCCAGCGGCT 
    TGTGCACTGG AGATGATCCA CACCATGTCA TTAATCCATG ATGATCTTCC CTGTATGGAC 
    AACGATGATC TCCGACGAGG TAAGCCCACA AGTCATAAAA TATTCGGCGA AGATACTGCA 
    GTTCTTGCTG GCGATGCACT CCTATCACTT GCCTTTGAGC ACGTAGCTAG GAACACCAAG 
    AATGTTTCAT CGGACCGTGT GGTCCAAGCC ATTGCTGAGC TTGGATCAAC AGTTGGATCA 
    AAAGGTCTTG TGGCAGGTCA GATTGTGGAC ATTGACAGTG AAGGTAAAGA AGTGAGTTTG 
    AGCACATTGG AGTATATTCA TGTCCATAAA ACAGCAAAGC TCTTAGAGGC AGCGGTTGTT 
    TGTGGGGCGA TAATGGGAGG TGCAGATGCT ACAAGTGTCG AAAGACTTAG GAAATATGCT 
    AGGTCTATCG GGTTGCTGTT TCAGGTGGTG GATGATATAC TGGATGTGAC CAAGTCCTCA 
    GAGGAACTGG GGAAGACAGC CGGAAAGGAT CTGGCGAGTG ACAAGGCGAC CTACCCCAAG 
    CTGATGGGCA TAGACGAGGC CAAGAAATTT GCTGCCCAAT TGGTCGATGA AGCCAATCAA 
    GGTCTTGCTT TCTTCGATCA TGTCAAGGCT GCCCCATTAT ACCATTTTGC TAACTATATT 
    GCTACTCGAC AAAATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002305196.2
    CDS1..1098
    Translation

    Target ORF information:

    RefSeq Version XM_002305160.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s08970g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002305160.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCCTTCT CTACAACAAT CTCTTTCTAT GACAATTCGC TTCTCCTCAA AAAACCCATC 
    AATGGCCTCA TAAACAACCA GCCGAGAACC CCATTAGGCC ACCTCAAATT TGCGCCCTTG 
    AAAATTCAAG CCACCTATGT TGCAAGCCCA TCTTTCAAAC AGTCATTTCA ATCCCAAGAA 
    GTGGGCAACA AGTCACAGAA GGTCCCTTTG CCAGCATTCG AATTTAAGGA GTACATGATC 
    AACAAGGCAA ATCAAGTGAA CAAAGCACTA GATGAGGCAG TACCCTTGCA ACATCCCCAG 
    AAAATCAATG AAGCCATGAG ATATTCTCTG CTCGCGGGTG GAAAGCGTGT ACGTCCAATT 
    TTATGCATTG CTTCGTGTGA ATTAGTGGGA GGAGATGAGG GGTTAGCAAT GCCAGCGGCT 
    TGTGCACTGG AGATGATCCA CACCATGTCA TTAATCCATG ATGATCTTCC CTGTATGGAC 
    AACGATGATC TCCGACGAGG TAAGCCCACA AGTCATAAAA TATTCGGCGA AGATACTGCA 
    GTTCTTGCTG GCGATGCACT CCTATCACTT GCCTTTGAGC ACGTAGCTAG GAACACCAAG 
    AATGTTTCAT CGGACCGTGT GGTCCAAGCC ATTGCTGAGC TTGGATCAAC AGTTGGATCA 
    AAAGGTCTTG TGGCAGGTCA GATTGTGGAC ATTGACAGTG AAGGTAAAGA AGTGAGTTTG 
    AGCACATTGG AGTATATTCA TGTCCATAAA ACAGCAAAGC TCTTAGAGGC AGCGGTTGTT 
    TGTGGGGCGA TAATGGGAGG TGCAGATGCT ACAAGTGTCG AAAGACTTAG GAAATATGCT 
    AGGTCTATCG GGTTGCTGTT TCAGGTGGTG GATGATATAC TGGATGTGAC CAAGTCCTCA 
    GAGGAACTGG GGAAGACAGC CGGAAAGGAT CTGGCGAGTG ACAAGGCGAC CTACCCCAAG 
    CTGATGGGCA TAGACGAGGC CAAGAAATTT GCTGCCCAAT TGGTCGATGA AGCCAATCAA 
    GGTCTTGCTT TCTTCGATCA TGTCAAGGCT GCCCCATTAT ACCATTTTGC TAACTATATT 
    GCTACTCGAC AAAATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7493542 ( XM_002305160.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002305196.3 Populus trichocarpa geranylgeranyl pyrophosphate synthase, chloroplastic (LOC7493542), mRNA.
    Price & Availability↑
    CloneID OPa427999
    Clone ID Related Accession (Same CDS sequence) XM_002305160.3
    Accession Version XM_002305160.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1098bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product geranylgeranyl pyrophosphate synthase, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002305160.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCCTTCT CTACAACAAT CTCTTTCTAT GACAATTCGC TTCTCCTCAA AAAACCCATC 
    AATGGCCTCA TAAACAACCA GCCGAGAACC CCATTAGGCC ACCTCAAATT TGCGCCCTTG 
    AAAATTCAAG CCACCTATGT TGCAAGCCCA TCTTTCAAAC AGTCATTTCA ATCCCAAGAA 
    GTGGGCAACA AGTCACAGAA GGTCTCTTTT CCAGCGTTCG AATTTAAGGA GTACATGATC 
    AACAAGGCAA ATCAAGTGAA CAAAGCACTA GATGAGGCAG TACCCTTGCA ACATCCCCAG 
    AAAATCAATG AAGCCATGAG ATATTCTCTG CTCGCGGGTG GAAAGCGTGT ACGTCCAATT 
    TTATGCATTG CTTCGTGTGA ATTAGTGGGA GGAGATGAGG GGTTAGCAAT GCCAGCGGCT 
    TGTGCACTGG AGATGATCCA CACCATGTCA TTAATCCATG ATGATCTTCC CTGTATGGAC 
    AACGATGATC TCCGACGAGG TAAGCCCACA AGTCATAAAA TATTCGGCGA AGATACTGCA 
    GTTCTTGCTG GCGATGCACT CCTATCACTT GCCTTTGAGC ACGTAGCTAG GAACACCAAG 
    AATGTTTCAT CGGACCGTGT GGTCCAAGCC ATTGCTGAGC TTGGATCAAC AGTTGGATCA 
    AAAGGTCTTG TGGCAGGTCA GATTGTGGAC ATTGACAGTG AAGGTAAAGA AGTGAGTTTG 
    AGCACATTGG AGTATATTCA TGTCCATAAA ACAGCAAAGC TCTTAGAGGC AGCGGTTGTT 
    TGTGGGGCGA TAATGGGAGG TGCAGATGCT ACAAGTGTCG AAAGACTTAG GAAATATGCT 
    AGGTCTATCG GGTTGCTGTT TCAGGTGGTG GATGATATAC TGGATGTGAC CAAGTCCTCA 
    GAGGAACTGG GGAAGACAGC CGGAAAGGAT CTGGCGAGTG ACAAGGCGAC CTACCCCAAG 
    CTGATGGGCA TAGACGAGGC CAAGAAATTT GCTGCCCAAT TGGTCGATGA AGCCAATCAA 
    GGTCTTGCTT TCTTCGATCA TGTCAAGGCT GCCCCATTAT ACCATTTTGC TAACTATATT 
    GCTACTCGAC AAAATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002305196.3
    CDS115..1212
    Translation

    Target ORF information:

    RefSeq Version XM_002305160.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa geranylgeranyl pyrophosphate synthase, chloroplastic (LOC7493542), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002305160.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGCCTTCT CTACAACAAT CTCTTTCTAT GACAATTCGC TTCTCCTCAA AAAACCCATC 
    AATGGCCTCA TAAACAACCA GCCGAGAACC CCATTAGGCC ACCTCAAATT TGCGCCCTTG 
    AAAATTCAAG CCACCTATGT TGCAAGCCCA TCTTTCAAAC AGTCATTTCA ATCCCAAGAA 
    GTGGGCAACA AGTCACAGAA GGTCTCTTTT CCAGCGTTCG AATTTAAGGA GTACATGATC 
    AACAAGGCAA ATCAAGTGAA CAAAGCACTA GATGAGGCAG TACCCTTGCA ACATCCCCAG 
    AAAATCAATG AAGCCATGAG ATATTCTCTG CTCGCGGGTG GAAAGCGTGT ACGTCCAATT 
    TTATGCATTG CTTCGTGTGA ATTAGTGGGA GGAGATGAGG GGTTAGCAAT GCCAGCGGCT 
    TGTGCACTGG AGATGATCCA CACCATGTCA TTAATCCATG ATGATCTTCC CTGTATGGAC 
    AACGATGATC TCCGACGAGG TAAGCCCACA AGTCATAAAA TATTCGGCGA AGATACTGCA 
    GTTCTTGCTG GCGATGCACT CCTATCACTT GCCTTTGAGC ACGTAGCTAG GAACACCAAG 
    AATGTTTCAT CGGACCGTGT GGTCCAAGCC ATTGCTGAGC TTGGATCAAC AGTTGGATCA 
    AAAGGTCTTG TGGCAGGTCA GATTGTGGAC ATTGACAGTG AAGGTAAAGA AGTGAGTTTG 
    AGCACATTGG AGTATATTCA TGTCCATAAA ACAGCAAAGC TCTTAGAGGC AGCGGTTGTT 
    TGTGGGGCGA TAATGGGAGG TGCAGATGCT ACAAGTGTCG AAAGACTTAG GAAATATGCT 
    AGGTCTATCG GGTTGCTGTT TCAGGTGGTG GATGATATAC TGGATGTGAC CAAGTCCTCA 
    GAGGAACTGG GGAAGACAGC CGGAAAGGAT CTGGCGAGTG ACAAGGCGAC CTACCCCAAG 
    CTGATGGGCA TAGACGAGGC CAAGAAATTT GCTGCCCAAT TGGTCGATGA AGCCAATCAA 
    GGTCTTGCTT TCTTCGATCA TGTCAAGGCT GCCCCATTAT ACCATTTTGC TAACTATATT 
    GCTACTCGAC AAAATTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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