ORF » Species Summary » Populus trichocarpa » POPTR_0005s20910g cDNA ORF clone

POPTR_0005s20910g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0005s20910g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0005s20910g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa12813 XM_002306639.3
Latest version!		 Populus trichocarpa ribosome maturation protein SBDS (LOC7492443), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa12813 XM_002306639.2 Populus trichocarpa hypothetical protein (POPTR_0005s20910g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0005s20910g ( XM_002306639.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002306675.2 Populus trichocarpa ribosome maturation protein SBDS (LOC7492443), mRNA.
    Price & Availability↑
    CloneID OPa12813
    Clone ID Related Accession (Same CDS sequence) XM_002306639.3 , XM_002306639.2
    Accession Version XM_002306639.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1074bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product ribosome maturation protein SBDS
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002306639.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGTCGGTAA AGTTGCAGCA GCCGGTAGGG CAAAAACGGC TGACGAACGT AGCAGTGGTC 
    CGATTAAAGA AGCATGGTAT GCGTTTCGAG ATTGCTTGTT ACAAGAACAA GGTCCTCTCT 
    TGGCGCTCTG GCGTAGAGAA AGATTTGGAT GAAGTGCTGC AGTCCCACCA CACAGTTTAT 
    TCAAATGTTT CCAAAGGAAT TCTTGCAAAA TCTTTAGATT TGAATAAAGC TTTTGGACAT 
    GATGATCAGA CCAGAATTTG CCTCGAGATA TTGGACAAAG GGGAGCTTCA AGTGGCCGGG 
    AAAGAGAGGG AATCTCAGTT GTCTAGTCAG TTTCGGGATA TCGCAACTAT TGTTATGCAG 
    AAAACTATTA ATCCCGAAAC CCAACGTCCT TACACTATCA GTATGATTGA GAGATTGATG 
    CATGAAACTC ACTTTGCTGT TGAACCGCAT AACAGCTCTA AGAAGCAGGC GCTAGATGTT 
    ATTCGTGAGC TTCAAAAGCA TTTTCCAATC AAGCGGTCTC CAATGAGACT TGGGCTTACT 
    GTTAGTGGAC AGAATTTTTC TACTCTATTG GAAAAGCTTG GTGCCTGGGA TGCTAATGTT 
    GTTTCGAAAG ATGAATCTGG AAGTCGTCAA TCTATTATTT GTGAAATGGA CCCAGGTTTC 
    TTCAGGGACT GCGATACCTT GGTGAGGAAT CTGCAGGGCA GGCTGGAAAT TCTTGCGGTG 
    TCTGTTCATT TTGAGGAGGA CACCCATGTA GATGACTATG ATGACTATGA AGATGTGCCC 
    TCAGCCCTAC CCAAGGGATC TACTGATTCT GCTGTACAAC TGAGTGAGAA AATCCAAAAG 
    CAGACTCTCT CTGATGAAAA GAAAGCTGGG GCGGAGGTAA AGCAAAACAG GTGCAGCACG 
    TGCAATGTGT CTGTTGGGGA TGCAAAGCAG TTCAGGGATC ACTTCAAGAG CGACTGGCAC 
    AAACATAATT TGAAGCGCAA GACCAAGCAG CTGCCTCCTC TTACTTCAGA AGAGTGTTTG 
    GGTGACATGG ACATGAATGA CTCGAACACA GATATAAAAG AATACTCGTT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002306675.2
    CDS102..1175
    Translation

    Target ORF information:

    RefSeq Version XM_002306639.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa ribosome maturation protein SBDS (LOC7492443), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002306639.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGTCGGTAA AGTTGCAGCA GCCGGTAGGG CAAAAACGGC TGACGAACGT AGCAGTGGTC 
    CGATTAAAGA AGCATGGTAT GCGTTTCGAG ATTGCTTGTT ACAAGAACAA GGTCCTCTCT 
    TGGCGCTCTG GCGTAGAGAA AGATTTGGAT GAAGTGCTGC AGTCCCACCA CACAGTTTAT 
    TCAAATGTTT CCAAAGGAAT TCTTGCAAAA TCTTTAGATT TGAATAAAGC TTTTGGACAT 
    GATGATCAGA CCAGAATTTG CCTCGAGATA TTGGACAAAG GGGAGCTTCA AGTGGCCGGG 
    AAAGAGAGGG AATCTCAGTT GTCTAGTCAG TTTCGGGATA TCGCAACTAT TGTTATGCAG 
    AAAACTATTA ATCCCGAAAC CCAACGTCCT TACACTATCA GTATGATTGA GAGATTGATG 
    CATGAAACTC ACTTTGCTGT TGAACCGCAT AACAGCTCTA AGAAGCAGGC GCTAGATGTT 
    ATTCGTGAGC TTCAAAAGCA TTTTCCAATC AAGCGGTCTC CAATGAGACT TGGGCTTACT 
    GTTAGTGGAC AGAATTTTTC TACTCTATTG GAAAAGCTTG GTGCCTGGGA TGCTAATGTT 
    GTTTCGAAAG ATGAATCTGG AAGTCGTCAA TCTATTATTT GTGAAATGGA CCCAGGTTTC 
    TTCAGGGACT GCGATACCTT GGTGAGGAAT CTGCAGGGCA GGCTGGAAAT TCTTGCGGTG 
    TCTGTTCATT TTGAGGAGGA CACCCATGTA GATGACTATG ATGACTATGA AGATGTGCCC 
    TCAGCCCTAC CCAAGGGATC TACTGATTCT GCTGTACAAC TGAGTGAGAA AATCCAAAAG 
    CAGACTCTCT CTGATGAAAA GAAAGCTGGG GCGGAGGTAA AGCAAAACAG GTGCAGCACG 
    TGCAATGTGT CTGTTGGGGA TGCAAAGCAG TTCAGGGATC ACTTCAAGAG CGACTGGCAC 
    AAACATAATT TGAAGCGCAA GACCAAGCAG CTGCCTCCTC TTACTTCAGA AGAGTGTTTG 
    GGTGACATGG ACATGAATGA CTCGAACACA GATATAAAAG AATACTCGTT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0005s20910g ( XM_002306639.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002306675.2 Populus trichocarpa hypothetical protein (POPTR_0005s20910g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa12813
    Clone ID Related Accession (Same CDS sequence) XM_002306639.3 , XM_002306639.2
    Accession Version XM_002306639.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1074bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). On Dec 16, 2013 this sequence version replaced XM_002306639.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGTCGGTAA AGTTGCAGCA GCCGGTAGGG CAAAAACGGC TGACGAACGT AGCAGTGGTC 
    CGATTAAAGA AGCATGGTAT GCGTTTCGAG ATTGCTTGTT ACAAGAACAA GGTCCTCTCT 
    TGGCGCTCTG GCGTAGAGAA AGATTTGGAT GAAGTGCTGC AGTCCCACCA CACAGTTTAT 
    TCAAATGTTT CCAAAGGAAT TCTTGCAAAA TCTTTAGATT TGAATAAAGC TTTTGGACAT 
    GATGATCAGA CCAGAATTTG CCTCGAGATA TTGGACAAAG GGGAGCTTCA AGTGGCCGGG 
    AAAGAGAGGG AATCTCAGTT GTCTAGTCAG TTTCGGGATA TCGCAACTAT TGTTATGCAG 
    AAAACTATTA ATCCCGAAAC CCAACGTCCT TACACTATCA GTATGATTGA GAGATTGATG 
    CATGAAACTC ACTTTGCTGT TGAACCGCAT AACAGCTCTA AGAAGCAGGC GCTAGATGTT 
    ATTCGTGAGC TTCAAAAGCA TTTTCCAATC AAGCGGTCTC CAATGAGACT TGGGCTTACT 
    GTTAGTGGAC AGAATTTTTC TACTCTATTG GAAAAGCTTG GTGCCTGGGA TGCTAATGTT 
    GTTTCGAAAG ATGAATCTGG AAGTCGTCAA TCTATTATTT GTGAAATGGA CCCAGGTTTC 
    TTCAGGGACT GCGATACCTT GGTGAGGAAT CTGCAGGGCA GGCTGGAAAT TCTTGCGGTG 
    TCTGTTCATT TTGAGGAGGA CACCCATGTA GATGACTATG ATGACTATGA AGATGTGCCC 
    TCAGCCCTAC CCAAGGGATC TACTGATTCT GCTGTACAAC TGAGTGAGAA AATCCAAAAG 
    CAGACTCTCT CTGATGAAAA GAAAGCTGGG GCGGAGGTAA AGCAAAACAG GTGCAGCACG 
    TGCAATGTGT CTGTTGGGGA TGCAAAGCAG TTCAGGGATC ACTTCAAGAG CGACTGGCAC 
    AAACATAATT TGAAGCGCAA GACCAAGCAG CTGCCTCCTC TTACTTCAGA AGAGTGTTTG 
    GGTGACATGG ACATGAATGA CTCGAACACA GATATAAAAG AATACTCGTT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002306675.2
    CDS76..1149
    Translation

    Target ORF information:

    RefSeq Version XM_002306639.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s20910g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002306639.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    ATGTCGGTAA AGTTGCAGCA GCCGGTAGGG CAAAAACGGC TGACGAACGT AGCAGTGGTC 
    CGATTAAAGA AGCATGGTAT GCGTTTCGAG ATTGCTTGTT ACAAGAACAA GGTCCTCTCT 
    TGGCGCTCTG GCGTAGAGAA AGATTTGGAT GAAGTGCTGC AGTCCCACCA CACAGTTTAT 
    TCAAATGTTT CCAAAGGAAT TCTTGCAAAA TCTTTAGATT TGAATAAAGC TTTTGGACAT 
    GATGATCAGA CCAGAATTTG CCTCGAGATA TTGGACAAAG GGGAGCTTCA AGTGGCCGGG 
    AAAGAGAGGG AATCTCAGTT GTCTAGTCAG TTTCGGGATA TCGCAACTAT TGTTATGCAG 
    AAAACTATTA ATCCCGAAAC CCAACGTCCT TACACTATCA GTATGATTGA GAGATTGATG 
    CATGAAACTC ACTTTGCTGT TGAACCGCAT AACAGCTCTA AGAAGCAGGC GCTAGATGTT 
    ATTCGTGAGC TTCAAAAGCA TTTTCCAATC AAGCGGTCTC CAATGAGACT TGGGCTTACT 
    GTTAGTGGAC AGAATTTTTC TACTCTATTG GAAAAGCTTG GTGCCTGGGA TGCTAATGTT 
    GTTTCGAAAG ATGAATCTGG AAGTCGTCAA TCTATTATTT GTGAAATGGA CCCAGGTTTC 
    TTCAGGGACT GCGATACCTT GGTGAGGAAT CTGCAGGGCA GGCTGGAAAT TCTTGCGGTG 
    TCTGTTCATT TTGAGGAGGA CACCCATGTA GATGACTATG ATGACTATGA AGATGTGCCC 
    TCAGCCCTAC CCAAGGGATC TACTGATTCT GCTGTACAAC TGAGTGAGAA AATCCAAAAG 
    CAGACTCTCT CTGATGAAAA GAAAGCTGGG GCGGAGGTAA AGCAAAACAG GTGCAGCACG 
    TGCAATGTGT CTGTTGGGGA TGCAAAGCAG TTCAGGGATC ACTTCAAGAG CGACTGGCAC 
    AAACATAATT TGAAGCGCAA GACCAAGCAG CTGCCTCCTC TTACTTCAGA AGAGTGTTTG 
    GGTGACATGG ACATGAATGA CTCGAACACA GATATAAAAG AATACTCGTT TTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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