ORF » Species Summary » Populus trichocarpa » POPTR_0004s03040g cDNA ORF clone

POPTR_0004s03040g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0004s03040g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0004s03040g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa10234 XM_002305604.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0004s03040g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa428036 XM_024599298.1
Latest version!		 Populus trichocarpa uncharacterized LOC7490769 (LOC7490769), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0004s03040g ( XM_002305604.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002305640.1 Populus trichocarpa hypothetical protein (POPTR_0004s03040g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa10234
    Clone ID Related Accession (Same CDS sequence) XM_002305604.2
    Accession Version XM_002305604.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1161bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). On Dec 16, 2013 this sequence version replaced XM_002305604.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGCCTTCCA AATTTTGGTT CTCTGTGAAG AAATCATTGA AGTGCGAACT AAAGCCATCA 
    GACGTGCATG ATCCAAGGGC CAAGAGCGAT CTGAGCAACA TTCAGACAAG AAACTCAATC 
    AAGTCTGGAT GTTCAAGATC CTTGTCAAAT CTACGAGAGA TCATTCATGG GAGCACGAGG 
    TATACAGAGA AGCCACTAAC TAGCAGCCCA AGATCTCTAG AAAGCACTGA TTTTCTCAAC 
    TCCATAGCAC ATGAAGTAGT CCTTTGTGAC ACTAAATGTG AACTAAAGAT TACGGGTGGC 
    AGAGGACATG ACATTGTGTC CCCCAGAAGG TCATGTAGCT ATTCAAGGAA GAAACATGGT 
    GATTCTCCTA TATATTGTAA TGGGAACGGT GTATCTTCCA AGCCTAAAAG CTCTCATGAT 
    GCAGATTCTT ATGGTTCTCC ATCTTTAGTT TGCAAGAAAT GTCATGCAAA ATTTAAGGAG 
    TTGGATGCTT TTGAGGCACA TCATCTTTCA AACCATGCTG TTACTGAACT TGTGGAAGGG 
    AACTCATCTA GGAGGATAGT AGAATTAATC TGCAGAACAA GGTGGTTACA ATCTGAGAAC 
    AACTGTGTTA CTATAGAGAG GGTTTTGAAG GTCCACAACA TGCAAATGAC CCTTGTTCAA 
    TTTGAAGAAC ATAGAGAAAT GGTGAAAATC AAAGCTAGCA AACTGCCTAC GAAACATTCG 
    CGTTGTCTCG CCGACGGCAA TGAGCTTTTG AGGTTCCATG GCACAACAGT TGCTTGTTCT 
    CTTGGTCTGA ATGGCTCCTC TAGCCTTTGT AGAATGGAGA AATGCGGTGT ATGCCAGATT 
    TTGAGACATG GGTTCACTGA CAAAGATGTC AATGGCATTG GGGTCGGAAT TTTTACTACT 
    TCCACAAGTG GAAGAGCCTT GGAATCTGTA GAAGTAAGTC AAGATAACCA AGATGTAAGA 
    AAGGCTTTGT TACTATGTAG AGTTATTGCT GGTAGGGTTC ATAGGCCTTT GGAAAATGTT 
    CAAGAAATTG CAGGTCAATC AGGCTTTGAT TCACTTGCTG GGAAAGCTGG TCAAAATTCA 
    CATCTACTTG AGGAACTGTA TCTGCTAAAT CCCAAAGCTC TCCTTCCTTG CTTTGTGGTA 
    ACTTGTAATC ATGAATGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002305640.1
    CDS1..1161
    Translation

    Target ORF information:

    RefSeq Version XM_002305604.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s03040g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002305604.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGCCTTCCA AATTTTGGTT CTCTGTGAAG AAATCATTGA AGTGCGAACT AAAGCCATCA 
    GACGTGCATG ATCCAAGGGC CAAGAGCGAT CTGAGCAACA TTCAGACAAG AAACTCAATC 
    AAGTCTGGAT GTTCAAGATC CTTGTCAAAT CTACGAGAGA TCATTCATGG GAGCACGAGG 
    TATACAGAGA AGCCACTAAC TAGCAGCCCA AGATCTCTAG AAAGCACTGA TTTTCTCAAC 
    TCCATAGCAC ATGAAGTAGT CCTTTGTGAC ACTAAATGTG AACTAAAGAT TACGGGTGGC 
    AGAGGACATG ACATTGTGTC CCCCAGAAGG TCATGTAGCT ATTCAAGGAA GAAACATGGT 
    GATTCTCCTA TATATTGTAA TGGGAACGGT GTATCTTCCA AGCCTAAAAG CTCTCATGAT 
    GCAGATTCTT ATGGTTCTCC ATCTTTAGTT TGCAAGAAAT GTCATGCAAA ATTTAAGGAG 
    TTGGATGCTT TTGAGGCACA TCATCTTTCA AACCATGCTG TTACTGAACT TGTGGAAGGG 
    AACTCATCTA GGAGGATAGT AGAATTAATC TGCAGAACAA GGTGGTTACA ATCTGAGAAC 
    AACTGTGTTA CTATAGAGAG GGTTTTGAAG GTCCACAACA TGCAAATGAC CCTTGTTCAA 
    TTTGAAGAAC ATAGAGAAAT GGTGAAAATC AAAGCTAGCA AACTGCCTAC GAAACATTCG 
    CGTTGTCTCG CCGACGGCAA TGAGCTTTTG AGGTTCCATG GCACAACAGT TGCTTGTTCT 
    CTTGGTCTGA ATGGCTCCTC TAGCCTTTGT AGAATGGAGA AATGCGGTGT ATGCCAGATT 
    TTGAGACATG GGTTCACTGA CAAAGATGTC AATGGCATTG GGGTCGGAAT TTTTACTACT 
    TCCACAAGTG GAAGAGCCTT GGAATCTGTA GAAGTAAGTC AAGATAACCA AGATGTAAGA 
    AAGGCTTTGT TACTATGTAG AGTTATTGCT GGTAGGGTTC ATAGGCCTTT GGAAAATGTT 
    CAAGAAATTG CAGGTCAATC AGGCTTTGAT TCACTTGCTG GGAAAGCTGG TCAAAATTCA 
    CATCTACTTG AGGAACTGTA TCTGCTAAAT CCCAAAGCTC TCCTTCCTTG CTTTGTGGTA 
    ACTTGTAATC ATGAATGTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0004s03040g ( XM_024599298.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024455066.1 Populus trichocarpa uncharacterized LOC7490769 (LOC7490769), mRNA.
    Price & Availability↑
    CloneID OPa428036
    Clone ID Related Accession (Same CDS sequence) XM_024599298.1
    Accession Version XM_024599298.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1224bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product uncharacterized protein LOC7490769
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCCTTCCA AATTTTGGTT CTCTGTGAAG AAATCATTGA AGTGCGAACT AAAGCCATCA 
    GACGTGCATG ATCCAAGGGC CAAGAGCGAT CTGAGCAACA TTCAGACAAG AAACTCAATC 
    AAGTCTGGAT GTTCAAGATC CTTGTCAAAT CTACGAGAGA TCATTCATGG GAGCACGAGG 
    TATACAGAGA AGCCACTAAC TAGCAGCCCA AGATCTCTAG AAAGCACTGA TTTTCTCAAC 
    TCCATAGCAC ATGAAGTAGT CCTTTGTGAC ACTAAATGTG AACTAAAGAT TACGGGTGGC 
    AGAGGTTGTG ACAAGGGTGA TTCGTCCTTT GAGGATATCC TTAAGCTACG GACACCTCGT 
    CCTAGAGGAC ATGACATTGT GTCCCCCAGA AGGTCATGTA GCTATTCAAG GAAGAAACAT 
    GGTGATTCTC CTATATATTG TAATGGGAAC GGTGTATCTT CCAAGCCTAA AAGCTCTCAT 
    GATGCAGATT CTTATGGTTC TCCATCTTTA GTTTGCAAGA AATGTCATGC AAAATTTAAG 
    GAGTTGGATG CTTTTGAGGC ACATCATCTT TCAAACCATG CTGTTACTGA ACTTGTGGAA 
    GGGAACTCAT CTAGGAGGAT AGTAGAATTA ATCTGCAGAA CAAGGTGGTT ACAATCTGAG 
    AACAACTGTG TTACTATAGA GAGGGTTTTG AAGGTCCACA ACATGCAAAT GACCCTTGTT 
    CAATTTGAAG AACATAGAGA AATGGTGAAA ATCAAAGCTA GCAAACTGCC TACGAAACAT 
    TCGCGTTGTC TCGCCGACGG CAATGAGCTT TTGAGGTTCC ATGGCACAAC TGTTGCTTGT 
    TCTCTTGGTC TGAATGGCTC CTCTAGCCTT TGTAGAATGG AGAAATGCGG TGTATGCCAG 
    ATTTTGAGAC ATGGGTTCAC TGACAAAGAT GTCAATGGCA TTGGGGTCGG AATTTTTACT 
    ACTTCCACAA GTGGAAGAGC CTTGGAATCT GTAGAAGTAA GTCAAGATAA CCAAGATGTA 
    AGAAAGGCTT TGTTACTATG TAGAGTTATT GCTGGTAGGG TTCATAGGCC TTTGGAAAAT 
    GTTCAAGAAA TTGCAGGTCA ATCAGGCTTT GATTCACTTG CTGGGAAAGC TGGTCAAAAT 
    TCACATCTAC TTGAGGAACT GTATCTGCTA AATCCCAAAG CTCTCCTTCC TTGCTTTGTG 
    GTAACTTGTA ATCATGAATG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024455066.1
    CDS327..1550
    Translation

    Target ORF information:

    RefSeq Version XM_024599298.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa uncharacterized LOC7490769 (LOC7490769), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024599298.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCCTTCCA AATTTTGGTT CTCTGTGAAG AAATCATTGA AGTGCGAACT AAAGCCATCA 
    GACGTGCATG ATCCAAGGGC CAAGAGCGAT CTGAGCAACA TTCAGACAAG AAACTCAATC 
    AAGTCTGGAT GTTCAAGATC CTTGTCAAAT CTACGAGAGA TCATTCATGG GAGCACGAGG 
    TATACAGAGA AGCCACTAAC TAGCAGCCCA AGATCTCTAG AAAGCACTGA TTTTCTCAAC 
    TCCATAGCAC ATGAAGTAGT CCTTTGTGAC ACTAAATGTG AACTAAAGAT TACGGGTGGC 
    AGAGGTTGTG ACAAGGGTGA TTCGTCCTTT GAGGATATCC TTAAGCTACG GACACCTCGT 
    CCTAGAGGAC ATGACATTGT GTCCCCCAGA AGGTCATGTA GCTATTCAAG GAAGAAACAT 
    GGTGATTCTC CTATATATTG TAATGGGAAC GGTGTATCTT CCAAGCCTAA AAGCTCTCAT 
    GATGCAGATT CTTATGGTTC TCCATCTTTA GTTTGCAAGA AATGTCATGC AAAATTTAAG 
    GAGTTGGATG CTTTTGAGGC ACATCATCTT TCAAACCATG CTGTTACTGA ACTTGTGGAA 
    GGGAACTCAT CTAGGAGGAT AGTAGAATTA ATCTGCAGAA CAAGGTGGTT ACAATCTGAG 
    AACAACTGTG TTACTATAGA GAGGGTTTTG AAGGTCCACA ACATGCAAAT GACCCTTGTT 
    CAATTTGAAG AACATAGAGA AATGGTGAAA ATCAAAGCTA GCAAACTGCC TACGAAACAT 
    TCGCGTTGTC TCGCCGACGG CAATGAGCTT TTGAGGTTCC ATGGCACAAC TGTTGCTTGT 
    TCTCTTGGTC TGAATGGCTC CTCTAGCCTT TGTAGAATGG AGAAATGCGG TGTATGCCAG 
    ATTTTGAGAC ATGGGTTCAC TGACAAAGAT GTCAATGGCA TTGGGGTCGG AATTTTTACT 
    ACTTCCACAA GTGGAAGAGC CTTGGAATCT GTAGAAGTAA GTCAAGATAA CCAAGATGTA 
    AGAAAGGCTT TGTTACTATG TAGAGTTATT GCTGGTAGGG TTCATAGGCC TTTGGAAAAT 
    GTTCAAGAAA TTGCAGGTCA ATCAGGCTTT GATTCACTTG CTGGGAAAGC TGGTCAAAAT 
    TCACATCTAC TTGAGGAACT GTATCTGCTA AATCCCAAAG CTCTCCTTCC TTGCTTTGTG 
    GTAACTTGTA ATCATGAATG TTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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