ORF » Species Summary » Populus trichocarpa » POPTR_0013s05120g cDNA ORF clone

POPTR_0013s05120g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0013s05120g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0013s05120g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa28247 XM_002319109.3
Latest version!		 Populus trichocarpa U11/U12 small nuclear ribonucleoprotein 65 kDa protein (LOC7489651), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa28247 XM_002319109.2 Populus trichocarpa hypothetical protein (POPTR_0013s05120g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0013s05120g ( XM_002319109.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002319145.2 Populus trichocarpa U11/U12 small nuclear ribonucleoprotein 65 kDa protein (LOC7489651), mRNA.
    Price & Availability↑
    CloneID OPa28247
    Clone ID Related Accession (Same CDS sequence) XM_002319109.3 , XM_002319109.2
    Accession Version XM_002319109.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1440bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product U11/U12 small nuclear ribonucleoprotein 65 kDa protein
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002319109.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCTT TTCCTTCTGC ACAGAATTTT ACGAATACCC AGATGCAGAA TTTTGGGTTT 
    CAAGGCACAG AGGTGAAAGC AGAGTCAGTA GAATCACAAG TGATTGTTAC CCTTTTGATT 
    AAACACCTCC CTGAAGATAT CCCTTTTGAC ACACTTTCAA GACTTTTCTC TCATTATGGT 
    GCTTTCTCTG TCCGCCCTTG CAATTCTGGA AGATTGAGAA ATTGTGCCTT TGTGGATTTC 
    CAAAGTGAAG GACTGGCTTA TCAAGCGCAT CGTCAGTTAA ATGGGCTGAG GTTTCTTGGC 
    AAGGTCTTAT CGGTGGAGAG AGCTAGTAAG CTAAATGAGG ATAGTAAATT TAAACAAAGT 
    GAGGCTCAAC AAGGAAAGGA TTCTGTACTA CCAACATCTT TGATGAAGGA TGCTTCTGTG 
    ACTAGAGATG TCATTGAAGG TTCAAATTTT GGGTCCTTAC CTGCTAGTGA ACCAATTGCA 
    CCAAGGCTTG GTGTTGACTA TCCATTTCCT CCTCACTTGG AGTATGCTTA CCCTCCACCA 
    GATGGAAACA TTCTGACCAA CATTGTAAAT GCTCTTATTG CTGTTCCTCG CTTCTATACA 
    CAGGTGTTGC ATTTGATGAA CAAAATGAAT ATTCCAGCTC CATTTCGAAT GGCCCTACCC 
    ACTCCACCTC TACCACTGCC ACCACCCTCT CCTCCACCAC CACCCCCTCC TCCATGTTTA 
    ACTGAAAATT CTTCACTGGC AGAGCAATCT AGTAGCGAGT CAGAAATGGA GTCTTCGGAT 
    GAGGAGGTTG ATGATAAAGC CCCTTATGGA GCCTCAGGAG CTGTTAAACA AAGAAGAAAA 
    CGCATTAAAC GGAAAGCAAT TGTAGGACCT GCAGCTGATA AAGACGTGGT TCATGAATCT 
    GTTGGCCTGA AACCTGCCTC CTTGGTCCCA AAAGAAATTC CAATTATAAA GAAAAAGAAT 
    ACCGTGCTGC AGATTAAGAT CGCACCAAAA GTAACTCATA ATGAATATAA GGATGATAGC 
    ATTATGACAG AATCTGAGGA CCCAGGCACA GAGGGTTCAG ATCAGAAACA CTATGCAACT 
    GCAGAAGAAA TAGAGAGTAA AAGGCTCGTT CCAGAGGAAA TTTTATCACT TCCAAAGTTT 
    AAGAACTACA CAGTTGGGAA TCCTGCATCT GTTCTGTACA TAAAGAACCT TGACAAAGAA 
    GTGGTTGCTG ATGATTTCTT CTACATATTT GGATCACTAT TTGGAAGCAT TGATGCAGCT 
    AAAAGTGGCC TCAGTGTCAA GTTGATGCAG GAGGGAAGAA TGAGGGGTCA AGCTTTTGTA 
    ACGTTTTCAT CAGTTGAACT TGCCCATCAA GCTCTGAATC TAGTGAATGG ATATGTATTC 
    AAAGACAAAC CGATGATCAT ACAATTTGGT CGGAATCCTT CAGCTGCCAA GCCAAATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319145.2
    CDS81..1520
    Translation

    Target ORF information:

    RefSeq Version XM_002319109.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa U11/U12 small nuclear ribonucleoprotein 65 kDa protein (LOC7489651), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319109.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCTT TTCCTTCTGC ACAGAATTTT ACGAATACCC AGATGCAGAA TTTTGGGTTT 
    CAAGGCACAG AGGTGAAAGC AGAGTCAGTA GAATCACAAG TGATTGTTAC CCTTTTGATT 
    AAACACCTCC CTGAAGATAT CCCTTTTGAC ACACTTTCAA GACTTTTCTC TCATTATGGT 
    GCTTTCTCTG TCCGCCCTTG CAATTCTGGA AGATTGAGAA ATTGTGCCTT TGTGGATTTC 
    CAAAGTGAAG GACTGGCTTA TCAAGCGCAT CGTCAGTTAA ATGGGCTGAG GTTTCTTGGC 
    AAGGTCTTAT CGGTGGAGAG AGCTAGTAAG CTAAATGAGG ATAGTAAATT TAAACAAAGT 
    GAGGCTCAAC AAGGAAAGGA TTCTGTACTA CCAACATCTT TGATGAAGGA TGCTTCTGTG 
    ACTAGAGATG TCATTGAAGG TTCAAATTTT GGGTCCTTAC CTGCTAGTGA ACCAATTGCA 
    CCAAGGCTTG GTGTTGACTA TCCATTTCCT CCTCACTTGG AGTATGCTTA CCCTCCACCA 
    GATGGAAACA TTCTGACCAA CATTGTAAAT GCTCTTATTG CTGTTCCTCG CTTCTATACA 
    CAGGTGTTGC ATTTGATGAA CAAAATGAAT ATTCCAGCTC CATTTCGAAT GGCCCTACCC 
    ACTCCACCTC TACCACTGCC ACCACCCTCT CCTCCACCAC CACCCCCTCC TCCATGTTTA 
    ACTGAAAATT CTTCACTGGC AGAGCAATCT AGTAGCGAGT CAGAAATGGA GTCTTCGGAT 
    GAGGAGGTTG ATGATAAAGC CCCTTATGGA GCCTCAGGAG CTGTTAAACA AAGAAGAAAA 
    CGCATTAAAC GGAAAGCAAT TGTAGGACCT GCAGCTGATA AAGACGTGGT TCATGAATCT 
    GTTGGCCTGA AACCTGCCTC CTTGGTCCCA AAAGAAATTC CAATTATAAA GAAAAAGAAT 
    ACCGTGCTGC AGATTAAGAT CGCACCAAAA GTAACTCATA ATGAATATAA GGATGATAGC 
    ATTATGACAG AATCTGAGGA CCCAGGCACA GAGGGTTCAG ATCAGAAACA CTATGCAACT 
    GCAGAAGAAA TAGAGAGTAA AAGGCTCGTT CCAGAGGAAA TTTTATCACT TCCAAAGTTT 
    AAGAACTACA CAGTTGGGAA TCCTGCATCT GTTCTGTACA TAAAGAACCT TGACAAAGAA 
    GTGGTTGCTG ATGATTTCTT CTACATATTT GGATCACTAT TTGGAAGCAT TGATGCAGCT 
    AAAAGTGGCC TCAGTGTCAA GTTGATGCAG GAGGGAAGAA TGAGGGGTCA AGCTTTTGTA 
    ACGTTTTCAT CAGTTGAACT TGCCCATCAA GCTCTGAATC TAGTGAATGG ATATGTATTC 
    AAAGACAAAC CGATGATCAT ACAATTTGGT CGGAATCCTT CAGCTGCCAA GCCAAATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0013s05120g ( XM_002319109.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002319145.2 Populus trichocarpa hypothetical protein (POPTR_0013s05120g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa28247
    Clone ID Related Accession (Same CDS sequence) XM_002319109.3 , XM_002319109.2
    Accession Version XM_002319109.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1440bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). On Dec 16, 2013 this sequence version replaced XM_002319109.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCTT TTCCTTCTGC ACAGAATTTT ACGAATACCC AGATGCAGAA TTTTGGGTTT 
    CAAGGCACAG AGGTGAAAGC AGAGTCAGTA GAATCACAAG TGATTGTTAC CCTTTTGATT 
    AAACACCTCC CTGAAGATAT CCCTTTTGAC ACACTTTCAA GACTTTTCTC TCATTATGGT 
    GCTTTCTCTG TCCGCCCTTG CAATTCTGGA AGATTGAGAA ATTGTGCCTT TGTGGATTTC 
    CAAAGTGAAG GACTGGCTTA TCAAGCGCAT CGTCAGTTAA ATGGGCTGAG GTTTCTTGGC 
    AAGGTCTTAT CGGTGGAGAG AGCTAGTAAG CTAAATGAGG ATAGTAAATT TAAACAAAGT 
    GAGGCTCAAC AAGGAAAGGA TTCTGTACTA CCAACATCTT TGATGAAGGA TGCTTCTGTG 
    ACTAGAGATG TCATTGAAGG TTCAAATTTT GGGTCCTTAC CTGCTAGTGA ACCAATTGCA 
    CCAAGGCTTG GTGTTGACTA TCCATTTCCT CCTCACTTGG AGTATGCTTA CCCTCCACCA 
    GATGGAAACA TTCTGACCAA CATTGTAAAT GCTCTTATTG CTGTTCCTCG CTTCTATACA 
    CAGGTGTTGC ATTTGATGAA CAAAATGAAT ATTCCAGCTC CATTTCGAAT GGCCCTACCC 
    ACTCCACCTC TACCACTGCC ACCACCCTCT CCTCCACCAC CACCCCCTCC TCCATGTTTA 
    ACTGAAAATT CTTCACTGGC AGAGCAATCT AGTAGCGAGT CAGAAATGGA GTCTTCGGAT 
    GAGGAGGTTG ATGATAAAGC CCCTTATGGA GCCTCAGGAG CTGTTAAACA AAGAAGAAAA 
    CGCATTAAAC GGAAAGCAAT TGTAGGACCT GCAGCTGATA AAGACGTGGT TCATGAATCT 
    GTTGGCCTGA AACCTGCCTC CTTGGTCCCA AAAGAAATTC CAATTATAAA GAAAAAGAAT 
    ACCGTGCTGC AGATTAAGAT CGCACCAAAA GTAACTCATA ATGAATATAA GGATGATAGC 
    ATTATGACAG AATCTGAGGA CCCAGGCACA GAGGGTTCAG ATCAGAAACA CTATGCAACT 
    GCAGAAGAAA TAGAGAGTAA AAGGCTCGTT CCAGAGGAAA TTTTATCACT TCCAAAGTTT 
    AAGAACTACA CAGTTGGGAA TCCTGCATCT GTTCTGTACA TAAAGAACCT TGACAAAGAA 
    GTGGTTGCTG ATGATTTCTT CTACATATTT GGATCACTAT TTGGAAGCAT TGATGCAGCT 
    AAAAGTGGCC TCAGTGTCAA GTTGATGCAG GAGGGAAGAA TGAGGGGTCA AGCTTTTGTA 
    ACGTTTTCAT CAGTTGAACT TGCCCATCAA GCTCTGAATC TAGTGAATGG ATATGTATTC 
    AAAGACAAAC CGATGATCAT ACAATTTGGT CGGAATCCTT CAGCTGCCAA GCCAAATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319145.2
    CDS1..1440
    Translation

    Target ORF information:

    RefSeq Version XM_002319109.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s05120g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319109.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCTT TTCCTTCTGC ACAGAATTTT ACGAATACCC AGATGCAGAA TTTTGGGTTT 
    CAAGGCACAG AGGTGAAAGC AGAGTCAGTA GAATCACAAG TGATTGTTAC CCTTTTGATT 
    AAACACCTCC CTGAAGATAT CCCTTTTGAC ACACTTTCAA GACTTTTCTC TCATTATGGT 
    GCTTTCTCTG TCCGCCCTTG CAATTCTGGA AGATTGAGAA ATTGTGCCTT TGTGGATTTC 
    CAAAGTGAAG GACTGGCTTA TCAAGCGCAT CGTCAGTTAA ATGGGCTGAG GTTTCTTGGC 
    AAGGTCTTAT CGGTGGAGAG AGCTAGTAAG CTAAATGAGG ATAGTAAATT TAAACAAAGT 
    GAGGCTCAAC AAGGAAAGGA TTCTGTACTA CCAACATCTT TGATGAAGGA TGCTTCTGTG 
    ACTAGAGATG TCATTGAAGG TTCAAATTTT GGGTCCTTAC CTGCTAGTGA ACCAATTGCA 
    CCAAGGCTTG GTGTTGACTA TCCATTTCCT CCTCACTTGG AGTATGCTTA CCCTCCACCA 
    GATGGAAACA TTCTGACCAA CATTGTAAAT GCTCTTATTG CTGTTCCTCG CTTCTATACA 
    CAGGTGTTGC ATTTGATGAA CAAAATGAAT ATTCCAGCTC CATTTCGAAT GGCCCTACCC 
    ACTCCACCTC TACCACTGCC ACCACCCTCT CCTCCACCAC CACCCCCTCC TCCATGTTTA 
    ACTGAAAATT CTTCACTGGC AGAGCAATCT AGTAGCGAGT CAGAAATGGA GTCTTCGGAT 
    GAGGAGGTTG ATGATAAAGC CCCTTATGGA GCCTCAGGAG CTGTTAAACA AAGAAGAAAA 
    CGCATTAAAC GGAAAGCAAT TGTAGGACCT GCAGCTGATA AAGACGTGGT TCATGAATCT 
    GTTGGCCTGA AACCTGCCTC CTTGGTCCCA AAAGAAATTC CAATTATAAA GAAAAAGAAT 
    ACCGTGCTGC AGATTAAGAT CGCACCAAAA GTAACTCATA ATGAATATAA GGATGATAGC 
    ATTATGACAG AATCTGAGGA CCCAGGCACA GAGGGTTCAG ATCAGAAACA CTATGCAACT 
    GCAGAAGAAA TAGAGAGTAA AAGGCTCGTT CCAGAGGAAA TTTTATCACT TCCAAAGTTT 
    AAGAACTACA CAGTTGGGAA TCCTGCATCT GTTCTGTACA TAAAGAACCT TGACAAAGAA 
    GTGGTTGCTG ATGATTTCTT CTACATATTT GGATCACTAT TTGGAAGCAT TGATGCAGCT 
    AAAAGTGGCC TCAGTGTCAA GTTGATGCAG GAGGGAAGAA TGAGGGGTCA AGCTTTTGTA 
    ACGTTTTCAT CAGTTGAACT TGCCCATCAA GCTCTGAATC TAGTGAATGG ATATGTATTC 
    AAAGACAAAC CGATGATCAT ACAATTTGGT CGGAATCCTT CAGCTGCCAA GCCAAATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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