ORF » Species Summary » Populus trichocarpa » LOC7488723 cDNA ORF clone

LOC7488723 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7488723 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7488723 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa33480 XM_002323582.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0016s13410g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa445505 XM_024587686.1
Latest version!		 Populus trichocarpa PRA1 family protein B4 (LOC7488723), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7488723 ( XM_002323582.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002323618.2 Populus trichocarpa hypothetical protein (POPTR_0016s13410g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa33480
    Clone ID Related Accession (Same CDS sequence) XM_002323582.2
    Accession Version XM_002323582.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 846bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008482). On Dec 16, 2013 this sequence version replaced XM_002323582.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGTCAAACC TGTTTATTAG TCAAATTGAC GGTAGGAAGG CAAGACGAAG CTGGTCCTCC 
    CGTTCTCAAC TCCCCACGCT AAATCATTCC TTAAATCGTC TCTCTAAGCT TGGCCATTGT 
    CATCTCCCTA AATTCCCTTC CTTCAAACAA AACAAAATCT ACACGATGTC GTCTCAATCT 
    CCGCCAGTCC TCCCTATCAC AAACCCCCAA CCAACCACCA CCACCACCAC CACCGCTACA 
    GCTTCCCAAC CACCACTCCC TCCACACGCC TTACGCGCAT TCCTTAACAA CATAACCGAA 
    TCCGTCCGCA ACGGCTTCTC CCAACGCCGC CCCTTTACCG AACTAATCGA CCGATCCGCT 
    TTCTCCAAAC CCGAATCCAT ATCCGAAGCC ACAACCCGGA TCCGCAAAAA CTACGCCTAT 
    TTCCGCATCA ATTACCTCGC CGCCATTTTC GTAATCCTCG CATTCTCCCT CCTTACTAAC 
    CCCTTCTCCC TCCTCCTCCT CGTCGGTCTC CTCTGCTCCT GGCTTTTCTT GTATCTCTTC 
    CGCGCTTCCG ATCAGCCTCT GGTCCTCTTC GGCCGGACAT TCAGTGATCG TGAAACGCTC 
    GGGATTTTAA TCGTTCTGAG CGTTTTCGTG GTTTTTCTAA CGAACGTTGG GTCAGTGATC 
    ATCTCGGCGC TTTTGGTCGG TGTGGGGATT GTGTGTGCTC ATGGCGCTTT TCGTGTTCCT 
    GAGGATCTCT TCTTGGATGA TGTTCAAGAA AACGCGAGTA CTGGGTTCTT GTCTTCATTC 
    CTCGGTGGCG CTGCCTCTAA TGTTGTCGCC TCCGCCGCTC CTATTGTGGC TGCCGCCCGT 
    GCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002323618.2
    CDS1..846
    Translation

    Target ORF information:

    RefSeq Version XM_002323582.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0016s13410g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002323582.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGTCAAACC TGTTTATTAG TCAAATTGAC GGTAGGAAGG CAAGACGAAG CTGGTCCTCC 
    CGTTCTCAAC TCCCCACGCT AAATCATTCC TTAAATCGTC TCTCTAAGCT TGGCCATTGT 
    CATCTCCCTA AATTCCCTTC CTTCAAACAA AACAAAATCT ACACGATGTC GTCTCAATCT 
    CCGCCAGTCC TCCCTATCAC AAACCCCCAA CCAACCACCA CCACCACCAC CACCGCTACA 
    GCTTCCCAAC CACCACTCCC TCCACACGCC TTACGCGCAT TCCTTAACAA CATAACCGAA 
    TCCGTCCGCA ACGGCTTCTC CCAACGCCGC CCCTTTACCG AACTAATCGA CCGATCCGCT 
    TTCTCCAAAC CCGAATCCAT ATCCGAAGCC ACAACCCGGA TCCGCAAAAA CTACGCCTAT 
    TTCCGCATCA ATTACCTCGC CGCCATTTTC GTAATCCTCG CATTCTCCCT CCTTACTAAC 
    CCCTTCTCCC TCCTCCTCCT CGTCGGTCTC CTCTGCTCCT GGCTTTTCTT GTATCTCTTC 
    CGCGCTTCCG ATCAGCCTCT GGTCCTCTTC GGCCGGACAT TCAGTGATCG TGAAACGCTC 
    GGGATTTTAA TCGTTCTGAG CGTTTTCGTG GTTTTTCTAA CGAACGTTGG GTCAGTGATC 
    ATCTCGGCGC TTTTGGTCGG TGTGGGGATT GTGTGTGCTC ATGGCGCTTT TCGTGTTCCT 
    GAGGATCTCT TCTTGGATGA TGTTCAAGAA AACGCGAGTA CTGGGTTCTT GTCTTCATTC 
    CTCGGTGGCG CTGCCTCTAA TGTTGTCGCC TCCGCCGCTC CTATTGTGGC TGCCGCCCGT 
    GCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7488723 ( XM_024587686.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024443454.1 Populus trichocarpa PRA1 family protein B4 (LOC7488723), mRNA.
    Price & Availability↑
    CloneID OPa445505
    Clone ID Related Accession (Same CDS sequence) XM_024587686.1
    Accession Version XM_024587686.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 675bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product PRA1 family protein B4
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037300.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGTCGTCTC AATCTCCGCC AGTCCTCCCT ATCACAAACC CCCAACCAAC CACCACCACC 
    ACCGCTACAG CTTCCCAACC ACCACTCCCT CCACACGCCT TACGCGCATT CCTTAACAAC 
    ATAACCGAAT CCGTCCGCAA CGGCTTCTCC CAACGCCGCC CCTTTACCGA ACTAATCGAC 
    CGATCCGCTT TCTCCAAACC CGAATCCATA TCCGAAGCCA CAACCCGGAT CCGCAAAAAC 
    TACGCCTATT TCCGCATCAA TTACCTCGCC GCCATTTTCG TAATCCTCGC ATTCTCCCTC 
    CTTACTAACC CCTTCTCCCT CCTCCTCCTC GTCGGTCTCC TCTGCTCCTG GCTTTTCTTG 
    TATCTCTTCC GCGCTTCCGA TCAGCCTCTG GTCCTCTTCG GCCGGACATT CAGTGACCGT 
    GAAACGCTCG GGATTCTAAT CGTTCTGAGC GTTTTCGTGG TTTTTCTAAC GAACGTTGGA 
    TCAGTGATCA TCTCGGCGCT TTTGGTCGGT GTGGGGATTG TCTGTGCTCA TGGCGCTTTT 
    CGTGTTCCTG AGGATCTTTT CTTGGATGAT GTTCAAGAAA ACGCGAGTAC AGGGTTCTTG 
    TCTTCATTCC TCGGTGGCGC TGCCTCTAAT GTTGTCGCCT CCGCCGCTCC TATTGTGGCT 
    GCCGCCCGTG CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024443454.1
    CDS116..790
    Translation

    Target ORF information:

    RefSeq Version XM_024587686.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa PRA1 family protein B4 (LOC7488723), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024587686.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGTCGTCTC AATCTCCGCC AGTCCTCCCT ATCACAAACC CCCAACCAAC CACCACCACC 
    ACCGCTACAG CTTCCCAACC ACCACTCCCT CCACACGCCT TACGCGCATT CCTTAACAAC 
    ATAACCGAAT CCGTCCGCAA CGGCTTCTCC CAACGCCGCC CCTTTACCGA ACTAATCGAC 
    CGATCCGCTT TCTCCAAACC CGAATCCATA TCCGAAGCCA CAACCCGGAT CCGCAAAAAC 
    TACGCCTATT TCCGCATCAA TTACCTCGCC GCCATTTTCG TAATCCTCGC ATTCTCCCTC 
    CTTACTAACC CCTTCTCCCT CCTCCTCCTC GTCGGTCTCC TCTGCTCCTG GCTTTTCTTG 
    TATCTCTTCC GCGCTTCCGA TCAGCCTCTG GTCCTCTTCG GCCGGACATT CAGTGACCGT 
    GAAACGCTCG GGATTCTAAT CGTTCTGAGC GTTTTCGTGG TTTTTCTAAC GAACGTTGGA 
    TCAGTGATCA TCTCGGCGCT TTTGGTCGGT GTGGGGATTG TCTGTGCTCA TGGCGCTTTT 
    CGTGTTCCTG AGGATCTTTT CTTGGATGAT GTTCAAGAAA ACGCGAGTAC AGGGTTCTTG 
    TCTTCATTCC TCGGTGGCGC TGCCTCTAAT GTTGTCGCCT CCGCCGCTCC TATTGTGGCT 
    GCCGCCCGTG CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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