POPTR_0016s07140g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0016s07140g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0016s07140g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa33460 XM_002323353.2
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0016s07140g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa445046 XM_002323353.3
Latest version!
Populus trichocarpa mediator of RNA polymerase II transcription subunit 27 (LOC7488095), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa33460
    Clone ID Related Accession (Same CDS sequence) XM_002323353.2
    Accession Version XM_002323353.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1311bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008482). On Dec 16, 2013 this sequence version replaced XM_002323353.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGACATGA AACCACATCC TCTATTGATA CAGCAGCAGC AGCAGCAGCA GCAGCCGATG 
    CAGCTGCAAG AACCTCCTGC TGCGGCGAGC CAAAACCCTA ACCCACCGTA TTCTGCGGAT
    GCACCGCCGA AACAGGTGGC TCTGGCTATG GAAAGGCTAG GTCAAGCCTC CCGACTCATC
    GCTGACGTCA GATTAGGCGC TGATCGCCTC CTCGAAGCGC TATTCATTGC TGCAGTTCCT
    CACCAGAGCA ATAAACCTTT GCAATTGTTT GTTAAAGAAG ATGCTTCCAT GCGCCAACAC
    CTCCAAGACC TCCGCTCCGT TGGAAGGCAA CTAGAAGAAT CTGGAGTTTT GAATGAAACT
    CTTCGGTCAC GTAGTAATTC GTGGGGTTTG CACTTGCCGG TGGTGTGTCC GGATGGTGCT
    GTTGTTGCCT ATGCTTGGAA ACGACAGCTT GCTGGACAGG CTGGTGCATC TGCAGTTGAT
    AGAACCAGGT TAGCTCTTAA GGCATTTACA GATCAGAAAA GGCGATTTTT TCCTCACCTT
    GATGAAGGAC AAGATGTTCA AAGTACGGAA CCAGCATCAA AGAAGCATTG TATTCCGAAA
    GATCTACTGC TGAATTATCA AGAAGAGCTT AGTGATTGCA AGACACTTTC GGATGTTTTA
    ACATGCTTGG AGAAAGAAAT GCTGAATTTG AAAGTTCTCA CTTATGAACG ATTGGATTGG
    TTTAAAAGAG CTTCCTCTTT ACCAGCTTCA GCAAGTGAGA ATCCTCTAGA CACATCGAAA
    GACCATGGTT TTCATAGTTT AAGTAAACTA AGAACAGTAT CGCAGAGTGC TGCAGCTACT
    GATAAGATTG CTGTTATCGA GTTGTTCTTT CCTTCCGTGT TCAGAGCTAT AATATCATTG
    CATCCAGCTG GTTCCATTGA CCCAGATGCA GTAGCTTTCT TTTCACCCGA TGAGGGAGGC
    AGCTATATAC ATGCAAGAGG TTTTTCAGTT CATCATGTAT TCAGAAAGAT ATCGGAGCAT
    GCTGCTATGG CCTTGCAGCA TTTTCTTGGG GTCAGCTCTA GAACAGCCTT ATATTCTATC
    GTGCACTGGA TATGCTGCTA CCAGACACTA TTTACCAAAG TTTGCAGTAA GTGTGGAAAG
    CTACTGGCAA TGGACCGAAA ATCAATGTTG CTACTACCCC CAGTTTATCG TCCTTATCTA
    CACTTTTCTA CCTTGCAAAT TGCATCAACT CAGACCAATT CCTCGGCCAA GGACCACGGT
    TTGGAGAACC TGGGGGCATT TCATATTGGT TGCTTTACAG AGGAGCTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002323389.2
    CDS214..1524
    Translation

    Target ORF information:

    RefSeq Version XM_002323353.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0016s07140g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002323353.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    ATGGACATGA AACCACATCC TCTATTGATA CAGCAGCAGC AGCAGCAGCA GCAGCCGATG 
    CAGCTGCAAG AACCTCCTGC TGCGGCGAGC CAAAACCCTA ACCCACCGTA TTCTGCGGAT
    GCACCGCCGA AACAGGTGGC TCTGGCTATG GAAAGGCTAG GTCAAGCCTC CCGACTCATC
    GCTGACGTCA GATTAGGCGC TGATCGCCTC CTCGAAGCGC TATTCATTGC TGCAGTTCCT
    CACCAGAGCA ATAAACCTTT GCAATTGTTT GTTAAAGAAG ATGCTTCCAT GCGCCAACAC
    CTCCAAGACC TCCGCTCCGT TGGAAGGCAA CTAGAAGAAT CTGGAGTTTT GAATGAAACT
    CTTCGGTCAC GTAGTAATTC GTGGGGTTTG CACTTGCCGG TGGTGTGTCC GGATGGTGCT
    GTTGTTGCCT ATGCTTGGAA ACGACAGCTT GCTGGACAGG CTGGTGCATC TGCAGTTGAT
    AGAACCAGGT TAGCTCTTAA GGCATTTACA GATCAGAAAA GGCGATTTTT TCCTCACCTT
    GATGAAGGAC AAGATGTTCA AAGTACGGAA CCAGCATCAA AGAAGCATTG TATTCCGAAA
    GATCTACTGC TGAATTATCA AGAAGAGCTT AGTGATTGCA AGACACTTTC GGATGTTTTA
    ACATGCTTGG AGAAAGAAAT GCTGAATTTG AAAGTTCTCA CTTATGAACG ATTGGATTGG
    TTTAAAAGAG CTTCCTCTTT ACCAGCTTCA GCAAGTGAGA ATCCTCTAGA CACATCGAAA
    GACCATGGTT TTCATAGTTT AAGTAAACTA AGAACAGTAT CGCAGAGTGC TGCAGCTACT
    GATAAGATTG CTGTTATCGA GTTGTTCTTT CCTTCCGTGT TCAGAGCTAT AATATCATTG
    CATCCAGCTG GTTCCATTGA CCCAGATGCA GTAGCTTTCT TTTCACCCGA TGAGGGAGGC
    AGCTATATAC ATGCAAGAGG TTTTTCAGTT CATCATGTAT TCAGAAAGAT ATCGGAGCAT
    GCTGCTATGG CCTTGCAGCA TTTTCTTGGG GTCAGCTCTA GAACAGCCTT ATATTCTATC
    GTGCACTGGA TATGCTGCTA CCAGACACTA TTTACCAAAG TTTGCAGTAA GTGTGGAAAG
    CTACTGGCAA TGGACCGAAA ATCAATGTTG CTACTACCCC CAGTTTATCG TCCTTATCTA
    CACTTTTCTA CCTTGCAAAT TGCATCAACT CAGACCAATT CCTCGGCCAA GGACCACGGT
    TTGGAGAACC TGGGGGCATT TCATATTGGT TGCTTTACAG AGGAGCTGTA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa445046
    Clone ID Related Accession (Same CDS sequence) XM_002323353.3
    Accession Version XM_002323353.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1254bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product mediator of RNA polymerase II transcription subunit 27
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037300.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002323353.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCAGCTGC AAGAACCTCC TGCTGCGGCG AGCCAAAACC CTAACCCACC GTCTTCTGCG 
    GATGCACCGC CGAAACAGGT GGCTCTGGCT ATGGAAAGGC TAGGTCAAGC CTCCCGACTC
    ATCGCTGACG TCAGATTAGG CGCTGATCGC CTCCTCGAAG CGCTATTCAT TGCTGCAGTT
    CCTCACCAGA GCAATAAACC TTTGCAATTG TTTGTTAAAG AAGATGCTTC CATGCGCCAA
    CACCTCCAAG ACCTCCGCTC CGTTGGAAGG CAACTAGAAG AATCTGGAGT TTTGAATGAA
    ACTCTTCGGT CACGTAGTAA TTCGTGGGGT TTGCACTTGC CGGTGGTGTG TCCGGATGGT
    GCTGTTGTTG CCTATGCTTG GAAACGACAG CTTGCTGGAC AGGCTGGTGC ATCTGCAGTT
    GATAGAACCA GGTTAGCTCT TAAGGCATTT ACAGATCAGA AAAGGCGATT TTTTCCTCAC
    CTTGATGAAG GACAAGATGT TCAAAGTACG GAACCAGCAT CAAAGAAGCA TTGTATTCCG
    AAAGATCTAC TGCTGAATTA TCAAGAAGAG CTTAGTGATT GCAAGACACT TTCGGATGTT
    TTAACATGCT TGGAGAAAGA AATGCTGAAT TTGAAAGTTC TCACTTATGA ACGATTGGAT
    TGGTTTAAAA GAGCTTCCTC TTTACCAGCT TCAGCAAGTG AGAATCCTCT AGACACATCG
    AAAGACCATG GTTTTCATAG TTTAAGTAAA CTAAGAACAG TATCGCAGAG TGCTGCAGCT
    ACTGATAAGA TTGCTGTTAT CGAGTTGTTC TTTCCTTCCG TGTTCAGAGC TATAATATCA
    TTGCATCCAG CTGGTTCCAT TGACCCAGAT GCAGTAGCTT TCTTTTCACC CGATGAGGGA
    GGCAGCTATA TACATGCAAG AGGTTTTTCA GTTCATCATG TATTCAGAAA GATCTCGGAG
    CATGCTGCTA TGGCCTTGCA GCATTTTCTT GGGGTCAGCT CTAGAACAGC CTTATATTCT
    ATCGTGCACT GGATATGCTG CTACCAGACA CTATTTACCA AAGTTTGCAG TAAGTGTGGA
    AAGCTACTGG CAATGGACCG AAAATCAATG TTGCTACTAC CCCCAGTTTA TCGTCCTTAT
    CTACACTTTT CTACCTTGCA AATTGCATCA ACTCAGACCA ATTCCTCGGC CAAGGACCAC
    GGTTTGGAGA ACCTGGGGGC ATTTCATATT GGTTGCTTTA CAGAGGAGCT GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002323389.3
    CDS104..1357
    Translation

    Target ORF information:

    RefSeq Version XM_002323353.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa mediator of RNA polymerase II transcription subunit 27 (LOC7488095), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002323353.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGCAGCTGC AAGAACCTCC TGCTGCGGCG AGCCAAAACC CTAACCCACC GTCTTCTGCG 
    GATGCACCGC CGAAACAGGT GGCTCTGGCT ATGGAAAGGC TAGGTCAAGC CTCCCGACTC
    ATCGCTGACG TCAGATTAGG CGCTGATCGC CTCCTCGAAG CGCTATTCAT TGCTGCAGTT
    CCTCACCAGA GCAATAAACC TTTGCAATTG TTTGTTAAAG AAGATGCTTC CATGCGCCAA
    CACCTCCAAG ACCTCCGCTC CGTTGGAAGG CAACTAGAAG AATCTGGAGT TTTGAATGAA
    ACTCTTCGGT CACGTAGTAA TTCGTGGGGT TTGCACTTGC CGGTGGTGTG TCCGGATGGT
    GCTGTTGTTG CCTATGCTTG GAAACGACAG CTTGCTGGAC AGGCTGGTGC ATCTGCAGTT
    GATAGAACCA GGTTAGCTCT TAAGGCATTT ACAGATCAGA AAAGGCGATT TTTTCCTCAC
    CTTGATGAAG GACAAGATGT TCAAAGTACG GAACCAGCAT CAAAGAAGCA TTGTATTCCG
    AAAGATCTAC TGCTGAATTA TCAAGAAGAG CTTAGTGATT GCAAGACACT TTCGGATGTT
    TTAACATGCT TGGAGAAAGA AATGCTGAAT TTGAAAGTTC TCACTTATGA ACGATTGGAT
    TGGTTTAAAA GAGCTTCCTC TTTACCAGCT TCAGCAAGTG AGAATCCTCT AGACACATCG
    AAAGACCATG GTTTTCATAG TTTAAGTAAA CTAAGAACAG TATCGCAGAG TGCTGCAGCT
    ACTGATAAGA TTGCTGTTAT CGAGTTGTTC TTTCCTTCCG TGTTCAGAGC TATAATATCA
    TTGCATCCAG CTGGTTCCAT TGACCCAGAT GCAGTAGCTT TCTTTTCACC CGATGAGGGA
    GGCAGCTATA TACATGCAAG AGGTTTTTCA GTTCATCATG TATTCAGAAA GATCTCGGAG
    CATGCTGCTA TGGCCTTGCA GCATTTTCTT GGGGTCAGCT CTAGAACAGC CTTATATTCT
    ATCGTGCACT GGATATGCTG CTACCAGACA CTATTTACCA AAGTTTGCAG TAAGTGTGGA
    AAGCTACTGG CAATGGACCG AAAATCAATG TTGCTACTAC CCCCAGTTTA TCGTCCTTAT
    CTACACTTTT CTACCTTGCA AATTGCATCA ACTCAGACCA ATTCCTCGGC CAAGGACCAC
    GGTTTGGAGA ACCTGGGGGC ATTTCATATT GGTTGCTTTA CAGAGGAGCT GTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D