ORF » Species Summary » Populus trichocarpa » LOC7488016 cDNA ORF clone

LOC7488016 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7488016 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7488016 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19625 XM_002311176.3
Latest version!		 Populus trichocarpa high mobility group B protein 1 (LOC7488016), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa19625 XM_006379566.2
Latest version!		 Populus trichocarpa high mobility group B protein 1 (LOC7488016), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
View Old Accession Versions >>
OPa19625 XM_002311176.2 Populus trichocarpa hypothetical protein (POPTR_0008s06730g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa19625 XM_006379566.1 Populus trichocarpa hypothetical protein (POPTR_0008s06730g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7488016 ( XM_006379566.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006379628.1 Populus trichocarpa hypothetical protein (POPTR_0008s06730g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19625
    Clone ID Related Accession (Same CDS sequence) XM_006379566.1 , XM_002311176.3 , XM_002311176.2 , XM_006379566.2
    Accession Version XM_006379566.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 516bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006379628.1
    CDS52..567
    Translation

    Target ORF information:

    RefSeq Version XM_006379566.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0008s06730g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006379566.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7488016 ( XM_002311176.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311212.2 Populus trichocarpa high mobility group B protein 1 (LOC7488016), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa19625
    Clone ID Related Accession (Same CDS sequence) XM_006379566.1 , XM_002311176.3 , XM_002311176.2 , XM_006379566.2
    Accession Version XM_002311176.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 516bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product high mobility group B protein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002311176.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311212.2
    CDS67..582
    Translation

    Target ORF information:

    RefSeq Version XM_002311176.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa high mobility group B protein 1 (LOC7488016), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311176.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7488016 ( XM_002311176.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002311212.2 Populus trichocarpa hypothetical protein (POPTR_0008s06730g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19625
    Clone ID Related Accession (Same CDS sequence) XM_006379566.1 , XM_002311176.3 , XM_002311176.2 , XM_006379566.2
    Accession Version XM_002311176.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 516bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002311176.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002311212.2
    CDS47..562
    Translation

    Target ORF information:

    RefSeq Version XM_002311176.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0008s06730g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002311176.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7488016 ( XM_006379566.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006379628.1 Populus trichocarpa high mobility group B protein 1 (LOC7488016), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa19625
    Clone ID Related Accession (Same CDS sequence) XM_006379566.1 , XM_002311176.3 , XM_002311176.2 , XM_006379566.2
    Accession Version XM_006379566.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 516bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product high mobility group B protein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006379566.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006379628.1
    CDS155..670
    Translation

    Target ORF information:

    RefSeq Version XM_006379566.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa high mobility group B protein 1 (LOC7488016), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006379566.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGAAAACTG CCAAGGGCAA GGGGGCAGCG AGGACGGAAA AGAAGGAAGT ATCACTCCCA 
    GTTGAGGACA GGAAGATTGG AAAGCGAAAG GCAGCACTAA AGGCTACCGA GAGTAGCAAG 
    AAACGAGCCG CGAAAGAAAA AATCACCAAG AAGGACCCTG ACAAACCCAA AAGGCCTCCG 
    AGTTCTTTCT TTGTTTTTCT AGAAGAGTTC AGGAAGATTT ACAAACAAGA GCACCCCAAT 
    ATGAAGGCTG TCTCAGCTGT GGGGAAAGCT GGAGGAGAGA AGTGGAAATC CATGTCTGCT 
    GCAGAGAAAG CTCCATATGA AGCTAAAGCA GCAATAAAGA AATCAGATTA TGGGAAGCTT 
    ATGACAGCCT ACAGCAAGAA ACAGGAAACG GATGATGGTG GTGCTGACGA AGAAGACGAT 
    TACAAACATT CTCACAGGTC CAAATCTGAA GTCGATGGCC AAGATGACAG TGATGAGAGT 
    GTAGGGGAGG ATGAAGATGA CGAGGACGAT GACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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