ORF » Species Summary » Populus trichocarpa » POPTR_0001s46690g cDNA ORF clone

POPTR_0001s46690g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s46690g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s46690g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01647 XM_002298992.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0001s46690g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa01648 XM_002300522.3
Latest version!		 Populus trichocarpa berberine bridge enzyme-like 21 (LOC7480401), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OPa01648 XM_002300522.2 Populus trichocarpa hypothetical protein (POPTR_0001s46690g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s46690g ( XM_002298992.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002299028.2 Populus trichocarpa hypothetical protein (POPTR_0001s46690g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01647
    Clone ID Related Accession (Same CDS sequence) XM_002298992.2
    Accession Version XM_002298992.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1755bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002298992.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCAAAAC CAACCCTTTT AGCCGTCCTT GTAATCCTTA TCTTCAATAT AACTTCTTCT 
    TCTTTCTCTG CCGCGGCTGA TGGTGATGAT TCAGTTTATG AATCTTTCCT TCAATGCCTA 
    GAAAGCAACA CAAACCCACA AGACGAAATC TCTAAACTTG TTTACTCACA ATCTAGCACA 
    TCTTACACTT CAGTTTTAAG AGCTTACATA AGAAACGCAC GTTACAATAC CTCAGCAACT 
    CCGAAGCCAG TTGTCATTGT AACTCCAACT CAAATATCCC ATGTTCAAGC CACGGTTATT 
    TGCACAAAAA AAGTTGGTTA CCAACTCAAA ATCAGAAGTG GTGGACATGA TTATGATGGG 
    ATTTCCTACG TTTCTGACAT GCCCTTTTTC GTTCTTGACA TGTTTAATCT CAGATCTATT 
    GAAGTTAATG TCAACGATGA GTCTGCTACT GTTCAAGCAG GGGCTACTCT TGGTGAACTT 
    TATTATAAAA TCTGGGAGAG CAGCAAAGTT CATGGTTTTC CTGCTGGGGT TTGTCCCACG 
    GTTGGTGTTG GTGGGCATTT AAGTGGTGCG GGTTATGGCA ATATGTTAAG GAAATATGGG 
    TTGTCGGTTG ATAATGTAGT GGATGCAGAA ATTGTTGATG TTAATGGGAA ACTTCTTGAT 
    AGGAAAGCAA TGGGGGAGGA TCTTTTTTGG GCAATTCGTG GAGGTGGTGG TGGAAGTTTT 
    GGGGTTATAA TTTCTTACAA GATCAAGCTT GTTTCTGTTC CTGAGACAGT TACTGTTTTC 
    AGAGTAGAAA GAACACTTGA ACAGAATGCT ACTGATGTTG TTTACAAGTG GCAATTAGTT 
    GCTCCTCAAA CAAGTAATGA TCTTTTCATG AGGATGCTCT TGCAGCCTGT GACAAGGAAC 
    GGTAATCAGA CTATTAGAGC CTCAATTGTG ACATTGTATT TAGGGAATTC TGATAGTCTT 
    GTGGCTTTAT TGGGAAAAGA ATTCCCTGAA TTGGGATTGA AGAAGGAGGA TTGTAATGAG 
    ACAAGTTGGA TTCAGTCTGT GATGTGGTGG GATGAGTCTC AAAATCTTGG AAAGTCGCCT 
    GATGTTCTTC TTGATAGGAA TCCTAATGAT GCCAATTTCT TGAAGAGGAA ATCAGATTAT 
    GTTCAGAATC CAATATCAAA AGATGGGTTG GAATGGTTGT GGAAAAAGAT GATTGAAGTA 
    GGCAAGACTG GATTGGTTTT CAATCCTTAT GGTGGTAGAA TGAATGAAAT TCCTGCCTCA 
    GAAACTCCAT TCCCTCACAG GGCAGGCAAT TTGTTCAAGG TGCAGTATTC AGTGAATTGG 
    GAAGAAGCAG GAAGCGAGGC AGACAAGAAT TTCATGACTC AAATAAGGAG GCTTCACAGT 
    TACATGACCC CATTTGTTTC CAAGAATCCA AGGAGTTCAT ATCTGAACTA TAGGGATCTT 
    GACATTGGTG TTATGGAGGC TGGTAAAGAT AGTTTCGAAC AGGGTAGTGT TTATGGCTAC 
    AAGTATTTCA ATGACAATTT TGATAGGTTG GTGAAAGTAA AGACTGCTGT TGATCCAGAA 
    AATTTCTTCA GGAATGAGCA GAGCATCCCT ACTTTACCAA ATGTAGAACA TGACTCAGGG 
    GTTACTGGAG GCTCTACTTC AAGGTCTATA TCATCCATGT TGATTCTAAT AATTCATCCA 
    CATAAGGCTC AAAATCTGAC TCAAATGAAA AGGTCTCCAC AACATCAAAG CCCATCTCCA 
    GTCTCAAAGG TTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299028.2
    CDS179..1933
    Translation

    Target ORF information:

    RefSeq Version XM_002298992.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s46690g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002298992.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGGCAAAAC CAACCCTTTT AGCCGTCCTT GTAATCCTTA TCTTCAATAT AACTTCTTCT 
    TCTTTCTCTG CCGCGGCTGA TGGTGATGAT TCAGTTTATG AATCTTTCCT TCAATGCCTA 
    GAAAGCAACA CAAACCCACA AGACGAAATC TCTAAACTTG TTTACTCACA ATCTAGCACA 
    TCTTACACTT CAGTTTTAAG AGCTTACATA AGAAACGCAC GTTACAATAC CTCAGCAACT 
    CCGAAGCCAG TTGTCATTGT AACTCCAACT CAAATATCCC ATGTTCAAGC CACGGTTATT 
    TGCACAAAAA AAGTTGGTTA CCAACTCAAA ATCAGAAGTG GTGGACATGA TTATGATGGG 
    ATTTCCTACG TTTCTGACAT GCCCTTTTTC GTTCTTGACA TGTTTAATCT CAGATCTATT 
    GAAGTTAATG TCAACGATGA GTCTGCTACT GTTCAAGCAG GGGCTACTCT TGGTGAACTT 
    TATTATAAAA TCTGGGAGAG CAGCAAAGTT CATGGTTTTC CTGCTGGGGT TTGTCCCACG 
    GTTGGTGTTG GTGGGCATTT AAGTGGTGCG GGTTATGGCA ATATGTTAAG GAAATATGGG 
    TTGTCGGTTG ATAATGTAGT GGATGCAGAA ATTGTTGATG TTAATGGGAA ACTTCTTGAT 
    AGGAAAGCAA TGGGGGAGGA TCTTTTTTGG GCAATTCGTG GAGGTGGTGG TGGAAGTTTT 
    GGGGTTATAA TTTCTTACAA GATCAAGCTT GTTTCTGTTC CTGAGACAGT TACTGTTTTC 
    AGAGTAGAAA GAACACTTGA ACAGAATGCT ACTGATGTTG TTTACAAGTG GCAATTAGTT 
    GCTCCTCAAA CAAGTAATGA TCTTTTCATG AGGATGCTCT TGCAGCCTGT GACAAGGAAC 
    GGTAATCAGA CTATTAGAGC CTCAATTGTG ACATTGTATT TAGGGAATTC TGATAGTCTT 
    GTGGCTTTAT TGGGAAAAGA ATTCCCTGAA TTGGGATTGA AGAAGGAGGA TTGTAATGAG 
    ACAAGTTGGA TTCAGTCTGT GATGTGGTGG GATGAGTCTC AAAATCTTGG AAAGTCGCCT 
    GATGTTCTTC TTGATAGGAA TCCTAATGAT GCCAATTTCT TGAAGAGGAA ATCAGATTAT 
    GTTCAGAATC CAATATCAAA AGATGGGTTG GAATGGTTGT GGAAAAAGAT GATTGAAGTA 
    GGCAAGACTG GATTGGTTTT CAATCCTTAT GGTGGTAGAA TGAATGAAAT TCCTGCCTCA 
    GAAACTCCAT TCCCTCACAG GGCAGGCAAT TTGTTCAAGG TGCAGTATTC AGTGAATTGG 
    GAAGAAGCAG GAAGCGAGGC AGACAAGAAT TTCATGACTC AAATAAGGAG GCTTCACAGT 
    TACATGACCC CATTTGTTTC CAAGAATCCA AGGAGTTCAT ATCTGAACTA TAGGGATCTT 
    GACATTGGTG TTATGGAGGC TGGTAAAGAT AGTTTCGAAC AGGGTAGTGT TTATGGCTAC 
    AAGTATTTCA ATGACAATTT TGATAGGTTG GTGAAAGTAA AGACTGCTGT TGATCCAGAA 
    AATTTCTTCA GGAATGAGCA GAGCATCCCT ACTTTACCAA ATGTAGAACA TGACTCAGGG 
    GTTACTGGAG GCTCTACTTC AAGGTCTATA TCATCCATGT TGATTCTAAT AATTCATCCA 
    CATAAGGCTC AAAATCTGAC TCAAATGAAA AGGTCTCCAC AACATCAAAG CCCATCTCCA 
    GTCTCAAAGG TTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s46690g ( XM_002300522.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002300558.2 Populus trichocarpa hypothetical protein (POPTR_0001s46690g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01648
    Clone ID Related Accession (Same CDS sequence) XM_002300522.2 , XM_002300522.3
    Accession Version XM_002300522.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1701bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002300522.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCAAAAC CAACCCTTTT AGCCGTCCTT GTAATCCTTA TCTTCAATAT AACTTCTTCT 
    TCTTTCTCTG CCGCGGCTGA TGGTGATGAT TCAGTTTATG AATCTTTCCT TCAATGCCTA 
    GAAAGCAACA CAAACCCACA AGACGAAATC TCTAAACTTG TTTACTCACA ATCTAGCACA 
    TCTTACACTT CAGTTTTAAG AGCTTACATA AGAAACGCAC GTTACAATAC CTCAGCAACT 
    CCGAAGCCAG TTGTCATTGT AACTCCAACT CAAATATCCC ATGTTCAAGC CACGGTTATT 
    TGCACAAAAA AAGTTGGTTA CCAACTCAAA ATCAGAAGTG GTGGACATGA TTATGATGGG 
    ATTTCCTACG TTTCTGACAT GCCCTTTTTC GTTCTTGACA TGTTTAATCT CAGATCTATT 
    GAAGTTAATG TCAACGATGA GTCTGCTACT GTTCAAGCAG GGGCTACTCT TGGTGAACTT 
    TATTATAAAA TCTGGGAGAG CAGCAAAGTT CATGGTTTTC CTGCTGGGGT TTGTCCCACG 
    GTTGGTGTTG GTGGGCATTT AAGTGGTGCG GGTTATGGCA ATATGTTAAG GAAATATGGG 
    TTGTCGGTTG ATAATGTAGT GGATGCAGAA ATTGTTGATG TTAATGGGAA ACTTCTTGAT 
    AGGAAAGCAA TGGGGGAGGA TCTTTTTTGG GCAATTCGTG GAGGTGGTGG TGGAAGTTTT 
    GGGGTTATAA TTTCTTACAA GATCAAGCTT GTTTCTGTTC CTGAGACAGT TACTGTTTTC 
    AGAGTAGAAA GAACACTTGA ACAGAATGCT ACTGATGTTG TTTACAAGTG GCAATTAGTT 
    GCTCCTCAAA CAAGTAATGA TCTTTTCATG AGGATGCTCT TGCAGCCTGT GACAAGGAAC 
    GGTAATCAGA CTATTAGAGC CTCAATTGTG ACATTGTATT TAGGGAATTC TGATAGTCTT 
    GTGGCTTTAT TGGGAAAAGA ATTCCCTGAA TTGGGATTGA AGAAGGAGGA TTGTAATGAG 
    ACAAGTTGGA TTCAGTCTGT GATGTGGTGG GATGAGTCTC AAAATCTTGG AAAGTCGCCT 
    GATGTTCTTC TTGATAGGAA TCCTAATGAT GCCAATTTCT TGAAGAGGAA ATCAGATTAT 
    GTTCAGAATC CAATATCAAA AGATGGGTTG GAATGGTTGT GGAAAAAGAT GATTGAAGTA 
    GGCAAGACTG GATTGGTTTT CAATCCTTAT GGTGGTAGAA TGAATGAAAT TCCTGCCTCA 
    GAAACTCCAT TCCCTCACAG GGCAGGCAAT TTGTTCAAGG TGCAGTATTC AGTGAATTGG 
    GAAGAAGCAG GAAGCGAGGC AGACAAGAAT TTCATGACTC AAATAAGGAG GCTTCACAGT 
    TACATGACCC CATTTGTTTC CAAGAATCCA AGGAGTTCAT ATCTGAACTA TAGGGATCTT 
    GACATTGGTG TTATGGAGGC TGGTAAAGAT AGTTTCGAAC AGGGTAGTGT TTATGGCTAC 
    AAGTATTTCA ATGACAATTT TGATAGGTTG GTGAAAGTAA AGACTGCTGT TGATCCAGAA 
    AATTTCTTCA GGAATGAGCA GAGCATCCCT ACTTTACCAA ATGTAGAACA TGACTCAGGG 
    GTTACTGGAG GCTCTACTTC AAGGTCTATA TCATCCATGT TGATTCTAAT AGTAATCTTG 
    ATATACTTTG CTTGTCTTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300558.2
    CDS179..1879
    Translation

    Target ORF information:

    RefSeq Version XM_002300522.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s46690g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002300522.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCAAAAC CAACCCTTTT AGCCGTCCTT GTAATCCTTA TCTTCAATAT AACTTCTTCT 
    TCTTTCTCTG CCGCGGCTGA TGGTGATGAT TCAGTTTATG AATCTTTCCT TCAATGCCTA 
    GAAAGCAACA CAAACCCACA AGACGAAATC TCTAAACTTG TTTACTCACA ATCTAGCACA 
    TCTTACACTT CAGTTTTAAG AGCTTACATA AGAAACGCAC GTTACAATAC CTCAGCAACT 
    CCGAAGCCAG TTGTCATTGT AACTCCAACT CAAATATCCC ATGTTCAAGC CACGGTTATT 
    TGCACAAAAA AAGTTGGTTA CCAACTCAAA ATCAGAAGTG GTGGACATGA TTATGATGGG 
    ATTTCCTACG TTTCTGACAT GCCCTTTTTC GTTCTTGACA TGTTTAATCT CAGATCTATT 
    GAAGTTAATG TCAACGATGA GTCTGCTACT GTTCAAGCAG GGGCTACTCT TGGTGAACTT 
    TATTATAAAA TCTGGGAGAG CAGCAAAGTT CATGGTTTTC CTGCTGGGGT TTGTCCCACG 
    GTTGGTGTTG GTGGGCATTT AAGTGGTGCG GGTTATGGCA ATATGTTAAG GAAATATGGG 
    TTGTCGGTTG ATAATGTAGT GGATGCAGAA ATTGTTGATG TTAATGGGAA ACTTCTTGAT 
    AGGAAAGCAA TGGGGGAGGA TCTTTTTTGG GCAATTCGTG GAGGTGGTGG TGGAAGTTTT 
    GGGGTTATAA TTTCTTACAA GATCAAGCTT GTTTCTGTTC CTGAGACAGT TACTGTTTTC 
    AGAGTAGAAA GAACACTTGA ACAGAATGCT ACTGATGTTG TTTACAAGTG GCAATTAGTT 
    GCTCCTCAAA CAAGTAATGA TCTTTTCATG AGGATGCTCT TGCAGCCTGT GACAAGGAAC 
    GGTAATCAGA CTATTAGAGC CTCAATTGTG ACATTGTATT TAGGGAATTC TGATAGTCTT 
    GTGGCTTTAT TGGGAAAAGA ATTCCCTGAA TTGGGATTGA AGAAGGAGGA TTGTAATGAG 
    ACAAGTTGGA TTCAGTCTGT GATGTGGTGG GATGAGTCTC AAAATCTTGG AAAGTCGCCT 
    GATGTTCTTC TTGATAGGAA TCCTAATGAT GCCAATTTCT TGAAGAGGAA ATCAGATTAT 
    GTTCAGAATC CAATATCAAA AGATGGGTTG GAATGGTTGT GGAAAAAGAT GATTGAAGTA 
    GGCAAGACTG GATTGGTTTT CAATCCTTAT GGTGGTAGAA TGAATGAAAT TCCTGCCTCA 
    GAAACTCCAT TCCCTCACAG GGCAGGCAAT TTGTTCAAGG TGCAGTATTC AGTGAATTGG 
    GAAGAAGCAG GAAGCGAGGC AGACAAGAAT TTCATGACTC AAATAAGGAG GCTTCACAGT 
    TACATGACCC CATTTGTTTC CAAGAATCCA AGGAGTTCAT ATCTGAACTA TAGGGATCTT 
    GACATTGGTG TTATGGAGGC TGGTAAAGAT AGTTTCGAAC AGGGTAGTGT TTATGGCTAC 
    AAGTATTTCA ATGACAATTT TGATAGGTTG GTGAAAGTAA AGACTGCTGT TGATCCAGAA 
    AATTTCTTCA GGAATGAGCA GAGCATCCCT ACTTTACCAA ATGTAGAACA TGACTCAGGG 
    GTTACTGGAG GCTCTACTTC AAGGTCTATA TCATCCATGT TGATTCTAAT AGTAATCTTG 
    ATATACTTTG CTTGTCTTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s46690g ( XM_002300522.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002300558.2 Populus trichocarpa berberine bridge enzyme-like 21 (LOC7480401), mRNA.
    Price & Availability↑
    CloneID OPa01648
    Clone ID Related Accession (Same CDS sequence) XM_002300522.2 , XM_002300522.3
    Accession Version XM_002300522.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1701bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product berberine bridge enzyme-like 21
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002300522.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCAAAAC CAACCCTTTT AGCCGTCCTT GTAATCCTTA TCTTCAATAT AACTTCTTCT 
    TCTTTCTCTG CCGCGGCTGA TGGTGATGAT TCAGTTTATG AATCTTTCCT TCAATGCCTA 
    GAAAGCAACA CAAACCCACA AGACGAAATC TCTAAACTTG TTTACTCACA ATCTAGCACA 
    TCTTACACTT CAGTTTTAAG AGCTTACATA AGAAACGCAC GTTACAATAC CTCAGCAACT 
    CCGAAGCCAG TTGTCATTGT AACTCCAACT CAAATATCCC ATGTTCAAGC CACGGTTATT 
    TGCACAAAAA AAGTTGGTTA CCAACTCAAA ATCAGAAGTG GTGGACATGA TTATGATGGG 
    ATTTCCTACG TTTCTGACAT GCCCTTTTTC GTTCTTGACA TGTTTAATCT CAGATCTATT 
    GAAGTTAATG TCAACGATGA GTCTGCTACT GTTCAAGCAG GGGCTACTCT TGGTGAACTT 
    TATTATAAAA TCTGGGAGAG CAGCAAAGTT CATGGTTTTC CTGCTGGGGT TTGTCCCACG 
    GTTGGTGTTG GTGGGCATTT AAGTGGTGCG GGTTATGGCA ATATGTTAAG GAAATATGGG 
    TTGTCGGTTG ATAATGTAGT GGATGCAGAA ATTGTTGATG TTAATGGGAA ACTTCTTGAT 
    AGGAAAGCAA TGGGGGAGGA TCTTTTTTGG GCAATTCGTG GAGGTGGTGG TGGAAGTTTT 
    GGGGTTATAA TTTCTTACAA GATCAAGCTT GTTTCTGTTC CTGAGACAGT TACTGTTTTC 
    AGAGTAGAAA GAACACTTGA ACAGAATGCT ACTGATGTTG TTTACAAGTG GCAATTAGTT 
    GCTCCTCAAA CAAGTAATGA TCTTTTCATG AGGATGCTCT TGCAGCCTGT GACAAGGAAC 
    GGTAATCAGA CTATTAGAGC CTCAATTGTG ACATTGTATT TAGGGAATTC TGATAGTCTT 
    GTGGCTTTAT TGGGAAAAGA ATTCCCTGAA TTGGGATTGA AGAAGGAGGA TTGTAATGAG 
    ACAAGTTGGA TTCAGTCTGT GATGTGGTGG GATGAGTCTC AAAATCTTGG AAAGTCGCCT 
    GATGTTCTTC TTGATAGGAA TCCTAATGAT GCCAATTTCT TGAAGAGGAA ATCAGATTAT 
    GTTCAGAATC CAATATCAAA AGATGGGTTG GAATGGTTGT GGAAAAAGAT GATTGAAGTA 
    GGCAAGACTG GATTGGTTTT CAATCCTTAT GGTGGTAGAA TGAATGAAAT TCCTGCCTCA 
    GAAACTCCAT TCCCTCACAG GGCAGGCAAT TTGTTCAAGG TGCAGTATTC AGTGAATTGG 
    GAAGAAGCAG GAAGCGAGGC AGACAAGAAT TTCATGACTC AAATAAGGAG GCTTCACAGT 
    TACATGACCC CATTTGTTTC CAAGAATCCA AGGAGTTCAT ATCTGAACTA TAGGGATCTT 
    GACATTGGTG TTATGGAGGC TGGTAAAGAT AGTTTCGAAC AGGGTAGTGT TTATGGCTAC 
    AAGTATTTCA ATGACAATTT TGATAGGTTG GTGAAAGTAA AGACTGCTGT TGATCCAGAA 
    AATTTCTTCA GGAATGAGCA GAGCATCCCT ACTTTACCAA ATGTAGAACA TGACTCAGGG 
    GTTACTGGAG GCTCTACTTC AAGGTCTATA TCATCCATGT TGATTCTAAT AGTAATCTTG 
    ATATACTTTG CTTGTCTTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002300558.2
    CDS130..1830
    Translation

    Target ORF information:

    RefSeq Version XM_002300522.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa berberine bridge enzyme-like 21 (LOC7480401), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002300522.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCAAAAC CAACCCTTTT AGCCGTCCTT GTAATCCTTA TCTTCAATAT AACTTCTTCT 
    TCTTTCTCTG CCGCGGCTGA TGGTGATGAT TCAGTTTATG AATCTTTCCT TCAATGCCTA 
    GAAAGCAACA CAAACCCACA AGACGAAATC TCTAAACTTG TTTACTCACA ATCTAGCACA 
    TCTTACACTT CAGTTTTAAG AGCTTACATA AGAAACGCAC GTTACAATAC CTCAGCAACT 
    CCGAAGCCAG TTGTCATTGT AACTCCAACT CAAATATCCC ATGTTCAAGC CACGGTTATT 
    TGCACAAAAA AAGTTGGTTA CCAACTCAAA ATCAGAAGTG GTGGACATGA TTATGATGGG 
    ATTTCCTACG TTTCTGACAT GCCCTTTTTC GTTCTTGACA TGTTTAATCT CAGATCTATT 
    GAAGTTAATG TCAACGATGA GTCTGCTACT GTTCAAGCAG GGGCTACTCT TGGTGAACTT 
    TATTATAAAA TCTGGGAGAG CAGCAAAGTT CATGGTTTTC CTGCTGGGGT TTGTCCCACG 
    GTTGGTGTTG GTGGGCATTT AAGTGGTGCG GGTTATGGCA ATATGTTAAG GAAATATGGG 
    TTGTCGGTTG ATAATGTAGT GGATGCAGAA ATTGTTGATG TTAATGGGAA ACTTCTTGAT 
    AGGAAAGCAA TGGGGGAGGA TCTTTTTTGG GCAATTCGTG GAGGTGGTGG TGGAAGTTTT 
    GGGGTTATAA TTTCTTACAA GATCAAGCTT GTTTCTGTTC CTGAGACAGT TACTGTTTTC 
    AGAGTAGAAA GAACACTTGA ACAGAATGCT ACTGATGTTG TTTACAAGTG GCAATTAGTT 
    GCTCCTCAAA CAAGTAATGA TCTTTTCATG AGGATGCTCT TGCAGCCTGT GACAAGGAAC 
    GGTAATCAGA CTATTAGAGC CTCAATTGTG ACATTGTATT TAGGGAATTC TGATAGTCTT 
    GTGGCTTTAT TGGGAAAAGA ATTCCCTGAA TTGGGATTGA AGAAGGAGGA TTGTAATGAG 
    ACAAGTTGGA TTCAGTCTGT GATGTGGTGG GATGAGTCTC AAAATCTTGG AAAGTCGCCT 
    GATGTTCTTC TTGATAGGAA TCCTAATGAT GCCAATTTCT TGAAGAGGAA ATCAGATTAT 
    GTTCAGAATC CAATATCAAA AGATGGGTTG GAATGGTTGT GGAAAAAGAT GATTGAAGTA 
    GGCAAGACTG GATTGGTTTT CAATCCTTAT GGTGGTAGAA TGAATGAAAT TCCTGCCTCA 
    GAAACTCCAT TCCCTCACAG GGCAGGCAAT TTGTTCAAGG TGCAGTATTC AGTGAATTGG 
    GAAGAAGCAG GAAGCGAGGC AGACAAGAAT TTCATGACTC AAATAAGGAG GCTTCACAGT 
    TACATGACCC CATTTGTTTC CAAGAATCCA AGGAGTTCAT ATCTGAACTA TAGGGATCTT 
    GACATTGGTG TTATGGAGGC TGGTAAAGAT AGTTTCGAAC AGGGTAGTGT TTATGGCTAC 
    AAGTATTTCA ATGACAATTT TGATAGGTTG GTGAAAGTAA AGACTGCTGT TGATCCAGAA 
    AATTTCTTCA GGAATGAGCA GAGCATCCCT ACTTTACCAA ATGTAGAACA TGACTCAGGG 
    GTTACTGGAG GCTCTACTTC AAGGTCTATA TCATCCATGT TGATTCTAAT AGTAATCTTG 
    ATATACTTTG CTTGTCTTTA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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