ORF » Species Summary » Populus trichocarpa » LOC7480110 cDNA ORF clone

LOC7480110 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7480110 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7480110 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01594 XM_002299934.2
Latest version!		 Populus trichocarpa dihydropyrimidinase family protein (POPTR_0001s28020g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa422726 XM_024589551.1
Latest version!		 Populus trichocarpa dihydropyrimidinase (LOC7480110), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7480110 ( XM_002299934.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002299970.2 Populus trichocarpa dihydropyrimidinase family protein (POPTR_0001s28020g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01594
    Clone ID Related Accession (Same CDS sequence) XM_002299934.2
    Accession Version XM_002299934.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1599bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product dihydropyrimidinase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002299934.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTTATC ATCTCTCTCT CTCCTTATTA CTCTCTCTTC TTCTCTTTAC TTATTTTCCT 
    TCAAATTCAC AATCCAACCA GTTCTGTGAG GCTGGTATTG GATATGATGA GGTTGGATGT 
    GGAATTTCAT CATCATCAAC AAAGCTGTTG ATCAAGGGAG GAACTGTTGT GAATGCGCAC 
    CATCAGGAGA TTGCTGATGT TTACGTAAAG GATGGGATTA TTGTTGCTGT CAAGCCTAAT 
    CTTAGGGTTG GTGACGATGT CAAAGTAATT GATGCTACAG GAAAGTTTGT CATGCCAGGT 
    GGAATTGATC CTCACACACA TCTTGCTGTG GAGGCCTTGA ACACTGAATC TGTTGATGAC 
    TTTTTCAGTG GTCAGGCAGC AGCTTTAGCA GGTGGAACCA CAATGCATAT TGACTTTGTT 
    ATACCAGTAA ATGGCAGTTT AATAGCAGGT TTAAAAGCAT ATGAGAAAAA GGCAAAGAAA 
    TCATGCATGG ATTATGGTTT TCATATGGTA ATCACTAAAT TTGATGACAT TGTTTCAAGG 
    GATATGGAAA TTATGGTGAA AGAAAAAGGT ATCAACTCTT TTAAGTTTTT TCTAGCATAC 
    AAGGGGGTGC TTATGGTCAA TGATGAGCTT TTATTAGAAG GATTGAAGAG GTGCAAGTCT 
    CTTGGTGCAT TAGCCATGGT ACATGCAGAA AATGGAGATG CTGTATTCGA AGGACAGAAA 
    AGAATGATAC AGCTTGGTAT TACTGGTCCA GAGGGACATG CTCTTTCGAG GCCCCCACTG 
    CTGGAAGGAG AGGCAACTGC TCGAGCAATT CGTTTAGCTG GTTTTGTGAA CACGCCACTC 
    TATGTAGTTC ATGTTATGAG CATTGATGCC ATGGAAGAAA TAGCCAAAGC TCGCAAATCA 
    GGGCAGAGAG TTGTTGGTGA GCCAGTGGTT TCTGGATTGG CCCTTGATGA TTCAGGACTT 
    TGGGATTCTG ACTTCACCAC TGCATCAAAG TATGTCATGA GCCCCCCTAT AAGAGCATCT 
    GGGCATGGCA AAGCCCTGCA AGATGCCCTT TCAAATGGAG TTCTGCAGCT GGTAGGAACT 
    GATCATTGTG TATTTAATTC CACACAAAAA GCCTCTGGGA TTGATGATTT CCGTAAAATT 
    CCTAATGGTG TCAATGGGAT TGAGGAGAGG ATGCATTTGG TTTGGGATCT GATGGTGGAA 
    TCTGGCCAAA TTTCTGTCAC TGATTATGTA CGGGTCACAA GCACTGAATG TGCCAGGATC 
    TTCAACATAT ACCCAAGAAA AGGGGCAATT ATTGCTGGAT CTGATGCTGA TATAATTATA 
    CTCAACCCAA ACTCAACCTT CGAAATTAAT GCAAGGTCTC ACCACTCTAG AACAGATACA 
    AATGTTTATG AAGGAAGAAG AGGGAAGGGA AAGGTTGAGG TGACAATTGC TGGAGGACGA 
    GTTGTTTGGG AAAATAATGA ACTGAAGGTT GTTCCTGGCT CTGGCAAGTA CATAGAAATG 
    GCCCCTTTCA GCTATCTTTT CAGCGGAATT GACAGGGCCG ATGCTTCGTA CCTATCTTCC 
    CTGAATGCTC CAGTGAAGCG TTTTAAATCC ACAACTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299970.2
    CDS75..1673
    Translation

    Target ORF information:

    RefSeq Version XM_002299934.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa dihydropyrimidinase family protein (POPTR_0001s28020g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002299934.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTTATC ATCTCTCTCT CTCCTTATTA CTCTCTCTTC TTCTCTTTAC TTATTTTCCT 
    TCAAATTCAC AATCCAACCA GTTCTGTGAG GCTGGTATTG GATATGATGA GGTTGGATGT 
    GGAATTTCAT CATCATCAAC AAAGCTGTTG ATCAAGGGAG GAACTGTTGT GAATGCGCAC 
    CATCAGGAGA TTGCTGATGT TTACGTAAAG GATGGGATTA TTGTTGCTGT CAAGCCTAAT 
    CTTAGGGTTG GTGACGATGT CAAAGTAATT GATGCTACAG GAAAGTTTGT CATGCCAGGT 
    GGAATTGATC CTCACACACA TCTTGCTGTG GAGGCCTTGA ACACTGAATC TGTTGATGAC 
    TTTTTCAGTG GTCAGGCAGC AGCTTTAGCA GGTGGAACCA CAATGCATAT TGACTTTGTT 
    ATACCAGTAA ATGGCAGTTT AATAGCAGGT TTAAAAGCAT ATGAGAAAAA GGCAAAGAAA 
    TCATGCATGG ATTATGGTTT TCATATGGTA ATCACTAAAT TTGATGACAT TGTTTCAAGG 
    GATATGGAAA TTATGGTGAA AGAAAAAGGT ATCAACTCTT TTAAGTTTTT TCTAGCATAC 
    AAGGGGGTGC TTATGGTCAA TGATGAGCTT TTATTAGAAG GATTGAAGAG GTGCAAGTCT 
    CTTGGTGCAT TAGCCATGGT ACATGCAGAA AATGGAGATG CTGTATTCGA AGGACAGAAA 
    AGAATGATAC AGCTTGGTAT TACTGGTCCA GAGGGACATG CTCTTTCGAG GCCCCCACTG 
    CTGGAAGGAG AGGCAACTGC TCGAGCAATT CGTTTAGCTG GTTTTGTGAA CACGCCACTC 
    TATGTAGTTC ATGTTATGAG CATTGATGCC ATGGAAGAAA TAGCCAAAGC TCGCAAATCA 
    GGGCAGAGAG TTGTTGGTGA GCCAGTGGTT TCTGGATTGG CCCTTGATGA TTCAGGACTT 
    TGGGATTCTG ACTTCACCAC TGCATCAAAG TATGTCATGA GCCCCCCTAT AAGAGCATCT 
    GGGCATGGCA AAGCCCTGCA AGATGCCCTT TCAAATGGAG TTCTGCAGCT GGTAGGAACT 
    GATCATTGTG TATTTAATTC CACACAAAAA GCCTCTGGGA TTGATGATTT CCGTAAAATT 
    CCTAATGGTG TCAATGGGAT TGAGGAGAGG ATGCATTTGG TTTGGGATCT GATGGTGGAA 
    TCTGGCCAAA TTTCTGTCAC TGATTATGTA CGGGTCACAA GCACTGAATG TGCCAGGATC 
    TTCAACATAT ACCCAAGAAA AGGGGCAATT ATTGCTGGAT CTGATGCTGA TATAATTATA 
    CTCAACCCAA ACTCAACCTT CGAAATTAAT GCAAGGTCTC ACCACTCTAG AACAGATACA 
    AATGTTTATG AAGGAAGAAG AGGGAAGGGA AAGGTTGAGG TGACAATTGC TGGAGGACGA 
    GTTGTTTGGG AAAATAATGA ACTGAAGGTT GTTCCTGGCT CTGGCAAGTA CATAGAAATG 
    GCCCCTTTCA GCTATCTTTT CAGCGGAATT GACAGGGCCG ATGCTTCGTA CCTATCTTCC 
    CTGAATGCTC CAGTGAAGCG TTTTAAATCC ACAACTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7480110 ( XM_024589551.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024445319.1 Populus trichocarpa dihydropyrimidinase (LOC7480110), mRNA.
    Price & Availability↑
    CloneID OPa422726
    Clone ID Related Accession (Same CDS sequence) XM_024589551.1
    Accession Version XM_024589551.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product dihydropyrimidinase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTTATC ATCTCTCTCT CTCCTTATTA CTCTCTCTTC TTCTCTTTAC TTATTTTCCT 
    TCAAATTCAC AATCCAACCA GTTCTGTGAG GCTGGTATTG GATATGATGA GGTTGGATGT 
    GGAATTTCAT CATCATCAAC AAAGCTGTTG ATCAAGGGAG GAACTGTTGT GAATGCGCAC 
    CATCAGGAGA TTGCTGATGT TTACGTAAAG GATGGGATTA TTGTTGCTGT CAGGGTTGGT 
    GACGATGTCA AAGTAATTGA TGCTACAGGA AAGTTTGTCA TGCCAGGTGG AATTGATCCT 
    CACACACATC TTGCTGTGGA GGCCTTGAAC ACTGAATCTG TTGATGACTT TTTCAGTGGT 
    CAGGCAGCAG CTTTAGCAGG TGGAACCACA ATGCATATTG ACTTTGTTAT ACCAGTAAAT 
    GGCAGTTTAA TAGCAGGTTT AAAAGCATAT GAGAAAAAGG CAAAGAAATC ATGCATGGAT 
    TATGGTTTTC ATATGGTAAT CACTAAATTT GATGACATTG TTTCAAGGGA TATGGAAATT 
    ATGGTGAAAG AAAAAGGTAT CAACTCTTTT AAGTTTTTTC TAGCATACAA GGGGGTGCTT 
    ATGGTCAATG ATGAGCTTTT ATTAGAAGGA TTGAAGAGGT GCAAGTCTCT TGGTGCATTA 
    GCCATGGTAC ATGCAGAAAA TGGAGATGCT GTATTCGAAG GACAGAAAAG AATGATACAG 
    CTTGGTATTA CTGGTCCAGA GGGACATGCT CTTTCGAGGC CCCCACTGCT GGAAGGAGAG 
    GCAACTGCTC GAGCAATTCG TTTAGCTGGT TTTGTGAACA CGCCACTCTA TGTAGTTCAT 
    GTTATGAGCA TTGATGCCAT GGAAGAAATA GCCAAAGCTC GCAAATCAGG GCAGAGAGTT 
    GTTGGTGAGC CAGTGGTTTC TGGATTGGCC CTTGATGATT CAGGACTTTG GGATTCTGAC 
    TTCACCACTG CATCAAAGTA TGTCATGAGC CCCCCTATAA GAGCATCTGG GCATGGCAAA 
    GCCCTGCAAG ATGCCCTTTC AAATGGAGTT CTGCAGCTGG TAGGAACTGA TCATTGTGTA 
    TTTAATTCCA CACAAAAAGC CTCTGGGATT GATGATTTCC GTAAAATTCC TAATGGTGTC 
    AATGGGATTG AGGAGAGGAT GCATTTGGTT TGGGATCTGA TGGTGGAATC TGGCCAAATT 
    TCTGTCACTG ATTATGTACG GGTCACAAGC ACTGAATGTG CCAGGATCTT CAACATATAC 
    CCAAGAAAAG GGGCAATTAT TGCTGGATCT GATGCTGATA TAATTATACT CAACCCAAAC 
    TCAACCTTCG AAATTAATGC AAGGTCTCAC CACTCTAGAA CAGATACAAA TGTTTATGAA 
    GGAAGAAGAG GGAAGGGAAA GGTTGAGGTG ACAATTGCTG GAGGACGAGT TGTTTGGGAA 
    AATAATGAAC TGAAGGTTGT TCCTGGCTCT GGCAAGTACA TAGAAATGGC CCCTTTCAGC 
    TATCTTTTCA GCGGAATTGA CAGGGCCGAT GCTTCGTACC TATCTTCCCT GAATGCTCCA 
    GTGAAGCGTT TTAAATCCAC AACTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024445319.1
    CDS105..1691
    Translation

    Target ORF information:

    RefSeq Version XM_024589551.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa dihydropyrimidinase (LOC7480110), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024589551.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCTTATC ATCTCTCTCT CTCCTTATTA CTCTCTCTTC TTCTCTTTAC TTATTTTCCT 
    TCAAATTCAC AATCCAACCA GTTCTGTGAG GCTGGTATTG GATATGATGA GGTTGGATGT 
    GGAATTTCAT CATCATCAAC AAAGCTGTTG ATCAAGGGAG GAACTGTTGT GAATGCGCAC 
    CATCAGGAGA TTGCTGATGT TTACGTAAAG GATGGGATTA TTGTTGCTGT CAGGGTTGGT 
    GACGATGTCA AAGTAATTGA TGCTACAGGA AAGTTTGTCA TGCCAGGTGG AATTGATCCT 
    CACACACATC TTGCTGTGGA GGCCTTGAAC ACTGAATCTG TTGATGACTT TTTCAGTGGT 
    CAGGCAGCAG CTTTAGCAGG TGGAACCACA ATGCATATTG ACTTTGTTAT ACCAGTAAAT 
    GGCAGTTTAA TAGCAGGTTT AAAAGCATAT GAGAAAAAGG CAAAGAAATC ATGCATGGAT 
    TATGGTTTTC ATATGGTAAT CACTAAATTT GATGACATTG TTTCAAGGGA TATGGAAATT 
    ATGGTGAAAG AAAAAGGTAT CAACTCTTTT AAGTTTTTTC TAGCATACAA GGGGGTGCTT 
    ATGGTCAATG ATGAGCTTTT ATTAGAAGGA TTGAAGAGGT GCAAGTCTCT TGGTGCATTA 
    GCCATGGTAC ATGCAGAAAA TGGAGATGCT GTATTCGAAG GACAGAAAAG AATGATACAG 
    CTTGGTATTA CTGGTCCAGA GGGACATGCT CTTTCGAGGC CCCCACTGCT GGAAGGAGAG 
    GCAACTGCTC GAGCAATTCG TTTAGCTGGT TTTGTGAACA CGCCACTCTA TGTAGTTCAT 
    GTTATGAGCA TTGATGCCAT GGAAGAAATA GCCAAAGCTC GCAAATCAGG GCAGAGAGTT 
    GTTGGTGAGC CAGTGGTTTC TGGATTGGCC CTTGATGATT CAGGACTTTG GGATTCTGAC 
    TTCACCACTG CATCAAAGTA TGTCATGAGC CCCCCTATAA GAGCATCTGG GCATGGCAAA 
    GCCCTGCAAG ATGCCCTTTC AAATGGAGTT CTGCAGCTGG TAGGAACTGA TCATTGTGTA 
    TTTAATTCCA CACAAAAAGC CTCTGGGATT GATGATTTCC GTAAAATTCC TAATGGTGTC 
    AATGGGATTG AGGAGAGGAT GCATTTGGTT TGGGATCTGA TGGTGGAATC TGGCCAAATT 
    TCTGTCACTG ATTATGTACG GGTCACAAGC ACTGAATGTG CCAGGATCTT CAACATATAC 
    CCAAGAAAAG GGGCAATTAT TGCTGGATCT GATGCTGATA TAATTATACT CAACCCAAAC 
    TCAACCTTCG AAATTAATGC AAGGTCTCAC CACTCTAGAA CAGATACAAA TGTTTATGAA 
    GGAAGAAGAG GGAAGGGAAA GGTTGAGGTG ACAATTGCTG GAGGACGAGT TGTTTGGGAA 
    AATAATGAAC TGAAGGTTGT TCCTGGCTCT GGCAAGTACA TAGAAATGGC CCCTTTCAGC 
    TATCTTTTCA GCGGAATTGA CAGGGCCGAT GCTTCGTACC TATCTTCCCT GAATGCTCCA 
    GTGAAGCGTT TTAAATCCAC AACTTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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