LOC7480062 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7480062 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7480062 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01555 XM_002299888.2
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0001s26930g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa420719 XM_002299888.3
Latest version!
Populus trichocarpa protein PNS1 (LOC7480062), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa01555
    Clone ID Related Accession (Same CDS sequence) XM_002299888.2
    Accession Version XM_002299888.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1251bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002299888.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGTTGTCG CTGTTGGACT GGTATCTTTT CTTATATTCA AGGGAATTCA AGGATTGACA 
    GAAGCTTCGG ATAGTGTGAA AAGAAAAGAG AGGAGGATAT TGAAGTTCTA CCTCCCACAA
    GTTGAAACCG CATCTCTATT AAGCATCACC CTTGCGTTTG TTTGGCAAAA GGCAGTTAGA
    CAATGGCCTA AATTCATGGT TCAGTTCATA TTATGGAGCT CTTTTTTACT GTCGTTATCA
    GCTGGAATTC TTTTAATTTG CTTCCAAAGG GCTACTACTG ATGGTGTTGG AGTTTGTCTT
    ATTGCCTTTT CAATTGGCAA TGGCTTGTAT GCCTGTTGGG TTACTCAAAG AATTGGGTTT
    TGCAGCAAGA TTCTGATCAA ATCACTGGAA CCGGTTCCGA AATTCCGTGA TTTGAACCAA
    CCCACTTATT GTATGCTTGG AGTTGGATTC TTGTGGATGT CTCTTTGGAT TTTAGCCGTG
    ATTGGAGCCA TGAATTTCTA CTTTACTCCT TTGATCATTA TTGCACTGGT GTTGAGCTTG
    GCTTGGACTG CAGAAGTTAT GAGGAATATA GTTAATTTGA CAGTTAGTAG GGTAATTGCT
    CTGTATTATC TTCGAGGAAT GCAATCCAGC AGTCAATTTT GTTTCCAAAG AGCTTTAACT
    CGGAACCTTG GTAGTGCTTG TCTGGGGTCT CTATTTGTGC CTGCTATTGA AGCACTGAGA
    ATTGTTGCTC GGGGTTTGAA TTTGCTAGAG GGGGAGGATG AGTTCATGTT TTCTTGTGCT
    CATTGCTGTC TTGGAATTAT GCAGTCTATC TTCAGATATG GAAATGGCTG GGCCTTTGTA
    CAGATAGCTG CATATGGAAA AGGGTTTGTG CAGGCATCAC AAGACACCTG GCAACTCTTC
    GAAAGACGCG GAATGGAATC CATTGTTGAC TTGGACATAA CCAGCTCGAT TTGCTTCCTC
    ACAGGTGTTT GCAGTGGATC TATTTGCGTA ATTGTTGTGG CTGCCTGGAC TGCCAAAGTG
    CATCAAACCT TCACTGCCAC TCTCTCGCTC CTGTCCTTCT TCATTGGATA CCTCATGACC
    AGGATTGCCA TGGCATTGCC GCATGCCTGT GTGAGCTGTT ACTATGTTTG CTACGCAGAA
    AATCCTGATC CCAGGTTGTT TGATCGAATC ATCAAAGATC AACAGGACAT GATGAACTCG
    GATCGCGGAG TGGTCATGCC CATACCCCGC AGATTTTCAA CTAACTCATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299924.2
    CDS91..1341
    Translation

    Target ORF information:

    RefSeq Version XM_002299888.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s26930g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002299888.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGGTTGTCG CTGTTGGACT GGTATCTTTT CTTATATTCA AGGGAATTCA AGGATTGACA 
    GAAGCTTCGG ATAGTGTGAA AAGAAAAGAG AGGAGGATAT TGAAGTTCTA CCTCCCACAA
    GTTGAAACCG CATCTCTATT AAGCATCACC CTTGCGTTTG TTTGGCAAAA GGCAGTTAGA
    CAATGGCCTA AATTCATGGT TCAGTTCATA TTATGGAGCT CTTTTTTACT GTCGTTATCA
    GCTGGAATTC TTTTAATTTG CTTCCAAAGG GCTACTACTG ATGGTGTTGG AGTTTGTCTT
    ATTGCCTTTT CAATTGGCAA TGGCTTGTAT GCCTGTTGGG TTACTCAAAG AATTGGGTTT
    TGCAGCAAGA TTCTGATCAA ATCACTGGAA CCGGTTCCGA AATTCCGTGA TTTGAACCAA
    CCCACTTATT GTATGCTTGG AGTTGGATTC TTGTGGATGT CTCTTTGGAT TTTAGCCGTG
    ATTGGAGCCA TGAATTTCTA CTTTACTCCT TTGATCATTA TTGCACTGGT GTTGAGCTTG
    GCTTGGACTG CAGAAGTTAT GAGGAATATA GTTAATTTGA CAGTTAGTAG GGTAATTGCT
    CTGTATTATC TTCGAGGAAT GCAATCCAGC AGTCAATTTT GTTTCCAAAG AGCTTTAACT
    CGGAACCTTG GTAGTGCTTG TCTGGGGTCT CTATTTGTGC CTGCTATTGA AGCACTGAGA
    ATTGTTGCTC GGGGTTTGAA TTTGCTAGAG GGGGAGGATG AGTTCATGTT TTCTTGTGCT
    CATTGCTGTC TTGGAATTAT GCAGTCTATC TTCAGATATG GAAATGGCTG GGCCTTTGTA
    CAGATAGCTG CATATGGAAA AGGGTTTGTG CAGGCATCAC AAGACACCTG GCAACTCTTC
    GAAAGACGCG GAATGGAATC CATTGTTGAC TTGGACATAA CCAGCTCGAT TTGCTTCCTC
    ACAGGTGTTT GCAGTGGATC TATTTGCGTA ATTGTTGTGG CTGCCTGGAC TGCCAAAGTG
    CATCAAACCT TCACTGCCAC TCTCTCGCTC CTGTCCTTCT TCATTGGATA CCTCATGACC
    AGGATTGCCA TGGCATTGCC GCATGCCTGT GTGAGCTGTT ACTATGTTTG CTACGCAGAA
    AATCCTGATC CCAGGTTGTT TGATCGAATC ATCAAAGATC AACAGGACAT GATGAACTCG
    GATCGCGGAG TGGTCATGCC CATACCCCGC AGATTTTCAA CTAACTCATG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa420719
    Clone ID Related Accession (Same CDS sequence) XM_002299888.3
    Accession Version XM_002299888.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1653bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product protein PNS1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002299888.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGGGGCTT CAGAACCTGT GGTAGAGAGA GAGGGTGAAA GGAGAGAGGA GGGAGAAGAA 
    GAAGATAAGG GGGAGGAGGA AGGAAATGAG AGGAAAGAAG AGGAGAAAGA TGTGGAGAAA
    GGACAAGTGC TGGGTGTTAA AGAAAAGGTG ATAGACAACA GTAACATTGG TGTCAATAAT
    GATCTACCTA ACCGGCTGGG AGATTCTCAT GTGGCAATGA TGCAGAGGTT GAACCCAACA
    AATCCTTTGA GGATTGTCAT CAATGGCTCT TCCAGAATGC CTACTCCTTC TCCTTCTCAG
    ACTTCTCTGC CTCGGTCTAC ACCAACCCCA CAACCATCGC TAACAACATT GAATTCAAGA
    AGATACACAA ACAGAATATC TCTGTTTCTG TTTGTCCTGC ACATGGTTGT CGCTGTTGGA
    CTGGTATCTT TTCTTATATT CAAGGGAGTT CAAGGATTGA CAGAAGCTTC GGATGGTGTG
    AAAAGAAAAG AGAGGAGGAT ATTGAAGTTC TACCTCCCAC AAGTTGAAAC CGCATCTCTA
    TTAAGCATCA CCCTTGCGTT TGTTTGGCAA AAGGCAGTTA GACAATGGCC TAAATTCATG
    GTTCAGTTCA TATTATGGAG CTCTTTTTTA CTGTCGTTAT CAGCTGGAAT TCTTTTAATT
    TGCTTCCAAA GGGCTACTAC TGATGGTGTT GGAGTCTGTC TTATTGCCTT TTCAATTGGC
    AATGGCTTGT ATGCCTGTTG GGTTACTCAA AGAATTGGGT TTTGCAGCAA GATTCTGATC
    AAATCACTGG AACCGGTTCC GAAATTCCGT GATTTGAACC AACCCACTTA TTGTATGCTT
    GGAGTTGGAT TCTTGTGGAT GTCTCTTTGG ATTTTAGCCG TGGTTGGAGC CATGAATTTC
    TACTTTACTC CTTTGATCAT TATTGCACTG GTGTTGAGCT TGGCTTGGAC TGCAGAAGTT
    ATGAGGAATA TAGTTAATTT GACAGTTAGT AGGGTAATTG CTCTGTATTA TCTTCGAGGA
    ATGCAATCCA GCAGTCAATT TTGTTTCCAA AGAGCTTTAA CTCGGAACCT TGGTAGTGCT
    TGTCTGGGGT CTCTATTTGT GCCTGCTATT GAAGCACTGA GAATTGTTGC TCGGGGTTTG
    AATTTGCTAG AGGGGGAGGA TGAGTTCATG TTTTCTTGTG CTCATTGCTG TCTTGGAATT
    ATGCAGTCTA TCTTCAGATA TGGAAATGGC TGGGCCTTTG TACAGATAGC TGCATATGGA
    AAAGGGTTTG TGCAGGCATC ACAAGACACC TGGCAACTCT TCGAAAGACG CGGAATGGAA
    TCCATTGTTG ACTTGGACAT AACCAGCTCG ATTTGCTTCC TCACAGGTGT TTGCAGTGGA
    TCTATTTGCG TAATTGTTGT GGCTGCCTGG ACTGCCAAAG TGCATCAAAC CTTCACTGCC
    ACTCTCTCGC TCCTGTCCTT CTTCATTGGA TACCTCATGA CCAGGATTGC CATGGCATTG
    CCGCATGCCT GTGTGAGCTG TTACTATGTT TGCTACGCAG AAAATCCTGA TCCCAGGTTG
    TTTGATCGAA TCATCAAAGA TCAACAGGAC ATGATGAACT CGGATCGCGG AGTGGTCATG
    CCCATACCCC GCAGATTTTC AACTAACTCA TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299924.3
    CDS138..1790
    Translation

    Target ORF information:

    RefSeq Version XM_002299888.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein PNS1 (LOC7480062), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002299888.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGGGGGCTT CAGAACCTGT GGTAGAGAGA GAGGGTGAAA GGAGAGAGGA GGGAGAAGAA 
    GAAGATAAGG GGGAGGAGGA AGGAAATGAG AGGAAAGAAG AGGAGAAAGA TGTGGAGAAA
    GGACAAGTGC TGGGTGTTAA AGAAAAGGTG ATAGACAACA GTAACATTGG TGTCAATAAT
    GATCTACCTA ACCGGCTGGG AGATTCTCAT GTGGCAATGA TGCAGAGGTT GAACCCAACA
    AATCCTTTGA GGATTGTCAT CAATGGCTCT TCCAGAATGC CTACTCCTTC TCCTTCTCAG
    ACTTCTCTGC CTCGGTCTAC ACCAACCCCA CAACCATCGC TAACAACATT GAATTCAAGA
    AGATACACAA ACAGAATATC TCTGTTTCTG TTTGTCCTGC ACATGGTTGT CGCTGTTGGA
    CTGGTATCTT TTCTTATATT CAAGGGAGTT CAAGGATTGA CAGAAGCTTC GGATGGTGTG
    AAAAGAAAAG AGAGGAGGAT ATTGAAGTTC TACCTCCCAC AAGTTGAAAC CGCATCTCTA
    TTAAGCATCA CCCTTGCGTT TGTTTGGCAA AAGGCAGTTA GACAATGGCC TAAATTCATG
    GTTCAGTTCA TATTATGGAG CTCTTTTTTA CTGTCGTTAT CAGCTGGAAT TCTTTTAATT
    TGCTTCCAAA GGGCTACTAC TGATGGTGTT GGAGTCTGTC TTATTGCCTT TTCAATTGGC
    AATGGCTTGT ATGCCTGTTG GGTTACTCAA AGAATTGGGT TTTGCAGCAA GATTCTGATC
    AAATCACTGG AACCGGTTCC GAAATTCCGT GATTTGAACC AACCCACTTA TTGTATGCTT
    GGAGTTGGAT TCTTGTGGAT GTCTCTTTGG ATTTTAGCCG TGGTTGGAGC CATGAATTTC
    TACTTTACTC CTTTGATCAT TATTGCACTG GTGTTGAGCT TGGCTTGGAC TGCAGAAGTT
    ATGAGGAATA TAGTTAATTT GACAGTTAGT AGGGTAATTG CTCTGTATTA TCTTCGAGGA
    ATGCAATCCA GCAGTCAATT TTGTTTCCAA AGAGCTTTAA CTCGGAACCT TGGTAGTGCT
    TGTCTGGGGT CTCTATTTGT GCCTGCTATT GAAGCACTGA GAATTGTTGC TCGGGGTTTG
    AATTTGCTAG AGGGGGAGGA TGAGTTCATG TTTTCTTGTG CTCATTGCTG TCTTGGAATT
    ATGCAGTCTA TCTTCAGATA TGGAAATGGC TGGGCCTTTG TACAGATAGC TGCATATGGA
    AAAGGGTTTG TGCAGGCATC ACAAGACACC TGGCAACTCT TCGAAAGACG CGGAATGGAA
    TCCATTGTTG ACTTGGACAT AACCAGCTCG ATTTGCTTCC TCACAGGTGT TTGCAGTGGA
    TCTATTTGCG TAATTGTTGT GGCTGCCTGG ACTGCCAAAG TGCATCAAAC CTTCACTGCC
    ACTCTCTCGC TCCTGTCCTT CTTCATTGGA TACCTCATGA CCAGGATTGC CATGGCATTG
    CCGCATGCCT GTGTGAGCTG TTACTATGTT TGCTACGCAG AAAATCCTGA TCCCAGGTTG
    TTTGATCGAA TCATCAAAGA TCAACAGGAC ATGATGAACT CGGATCGCGG AGTGGTCATG
    CCCATACCCC GCAGATTTTC AACTAACTCA TGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D