ORF » Species Summary » Populus trichocarpa » LOC7479622 cDNA ORF clone

LOC7479622 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7479622 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7479622 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa15046 XM_002307893.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0006s02620g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa430855 XM_024602530.1
Latest version!		 Populus trichocarpa small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial (LOC7479622), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7479622 ( XM_002307893.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307929.2 Populus trichocarpa hypothetical protein (POPTR_0006s02620g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa15046
    Clone ID Related Accession (Same CDS sequence) XM_002307893.2
    Accession Version XM_002307893.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1386bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). On Dec 16, 2013 this sequence version replaced XM_002307893.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGCAAATCC CTTCTTCACT ATCCCTCTTC CGCCATCGCA CTCCCACCTT CTTCCGCCAC 
    CACCCTCTCC TTATCACCGC ATCCAGACAC CACCAAAACC AACCCAATGT CTCCCGCAAA 
    CAACCACCAA GCAAAAACCT CCTCAAAGCC AAAAAAAACC TAACTTCCAA AAAAGACTTC 
    TCCAATCTCT CTCCGATCCT CTCCCCTGAC CACACCCCTA CCAACCTCTC CGATTCTCAA 
    GCCATCGGCA CCGTCGCCGC TTCCCAAGCG AACTTCATGC GCGTGATTGT CACCGCCGAA 
    CCTGAGAAGA TAGAAGATTC TAGTAGTAGT AGTAAAGTTG GAACTGAATT GCTATGCGTG 
    GTTCGGGCGG TGTTGAAGAA GATAAAACGG AGAGTCTTGG TTGGTGATAA GGTGGTGGTT 
    GGGTCAATTG ATTGGGTAGA TAGGAGAGGA ATGATTGAGA ATGTTTTTCA ACGGAGTTCG 
    GATATTTTAG ACCCGCCGGT AGCGAATGTG GATCGGTTGT TGGTTCTTTT TTCGGTTGAG 
    CAACCACAGT TGGAATCATT TGTGTTGACT AGGTTTTTGA TTGAGGCCGA ATCTACTGGG 
    ATTCCGATTA CTCTCGCGTT GAATAAAGCA GAACTTGTTG ATCAACAGGT GTTGAGTGAT 
    TGGGATACTA GATTGAGAAG TTGGGGTTAT GAGCCTCTCT TTTGTAGTGT TGATTCGAAA 
    ATGGGGCTTG ATAGTTTGGC TTCTGTTTTG AGAGATCAAA CGACAGTGAT TGTGGGTCCA 
    AGTGGAGTTG GGAAATCTAG CTTGATTAAT GCTTTGAGGA ATAAACCCAA TTCCCAACGC 
    GTCGGTAAAG TTTCAACGAG AAGTGGTAGA GGGAAGCACA CTACACGTAA CGTCTCTTTG 
    CTTCCACTTG GTGGAGGTGG TTATCTCGCT GATACTCCTG GGTTTAGCCA ACCTAGTTTG 
    TTGAAAGTAA CAAAGCAATC TCTTGCCCAG TATTTTCCGG AGATAAGGAA AATGCTTGGT 
    GACAATGAAC AGGCTAAATG TGCATTCAAT GATTGCTTGC ATGTTGGCGA ACCTGGGTGC 
    ATAGTAAAAG GGGATTGGGA AAGGTATCCC TTGTATTTCC AGCTTCTTGA TGAGATCAGA 
    ATCAGGGAAG AATTTCAGTT AAGGACATTT GGAACCAAGA GGGAAGATGA CGTAAGGTAC 
    AAGGTTGGAG ACATGGGTGT CAAGCAAGCA GAGCCACGTT TGGAGCCCAA GAAGCATAGA 
    AGACAGTCTC GCAAAAGGAT TAACCAATCA ATACTAGATG AGTTGAATGA ACTTGATGAT 
    GACGAAGATT TGTTGGATGA TGAAAACGAT CCTATCTTGA GGGCACTCAA GAATGAAAAT 
    CTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307929.2
    CDS1..1386
    Translation

    Target ORF information:

    RefSeq Version XM_002307893.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0006s02620g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307893.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGCAAATCC CTTCTTCACT ATCCCTCTTC CGCCATCGCA CTCCCACCTT CTTCCGCCAC 
    CACCCTCTCC TTATCACCGC ATCCAGACAC CACCAAAACC AACCCAATGT CTCCCGCAAA 
    CAACCACCAA GCAAAAACCT CCTCAAAGCC AAAAAAAACC TAACTTCCAA AAAAGACTTC 
    TCCAATCTCT CTCCGATCCT CTCCCCTGAC CACACCCCTA CCAACCTCTC CGATTCTCAA 
    GCCATCGGCA CCGTCGCCGC TTCCCAAGCG AACTTCATGC GCGTGATTGT CACCGCCGAA 
    CCTGAGAAGA TAGAAGATTC TAGTAGTAGT AGTAAAGTTG GAACTGAATT GCTATGCGTG 
    GTTCGGGCGG TGTTGAAGAA GATAAAACGG AGAGTCTTGG TTGGTGATAA GGTGGTGGTT 
    GGGTCAATTG ATTGGGTAGA TAGGAGAGGA ATGATTGAGA ATGTTTTTCA ACGGAGTTCG 
    GATATTTTAG ACCCGCCGGT AGCGAATGTG GATCGGTTGT TGGTTCTTTT TTCGGTTGAG 
    CAACCACAGT TGGAATCATT TGTGTTGACT AGGTTTTTGA TTGAGGCCGA ATCTACTGGG 
    ATTCCGATTA CTCTCGCGTT GAATAAAGCA GAACTTGTTG ATCAACAGGT GTTGAGTGAT 
    TGGGATACTA GATTGAGAAG TTGGGGTTAT GAGCCTCTCT TTTGTAGTGT TGATTCGAAA 
    ATGGGGCTTG ATAGTTTGGC TTCTGTTTTG AGAGATCAAA CGACAGTGAT TGTGGGTCCA 
    AGTGGAGTTG GGAAATCTAG CTTGATTAAT GCTTTGAGGA ATAAACCCAA TTCCCAACGC 
    GTCGGTAAAG TTTCAACGAG AAGTGGTAGA GGGAAGCACA CTACACGTAA CGTCTCTTTG 
    CTTCCACTTG GTGGAGGTGG TTATCTCGCT GATACTCCTG GGTTTAGCCA ACCTAGTTTG 
    TTGAAAGTAA CAAAGCAATC TCTTGCCCAG TATTTTCCGG AGATAAGGAA AATGCTTGGT 
    GACAATGAAC AGGCTAAATG TGCATTCAAT GATTGCTTGC ATGTTGGCGA ACCTGGGTGC 
    ATAGTAAAAG GGGATTGGGA AAGGTATCCC TTGTATTTCC AGCTTCTTGA TGAGATCAGA 
    ATCAGGGAAG AATTTCAGTT AAGGACATTT GGAACCAAGA GGGAAGATGA CGTAAGGTAC 
    AAGGTTGGAG ACATGGGTGT CAAGCAAGCA GAGCCACGTT TGGAGCCCAA GAAGCATAGA 
    AGACAGTCTC GCAAAAGGAT TAACCAATCA ATACTAGATG AGTTGAATGA ACTTGATGAT 
    GACGAAGATT TGTTGGATGA TGAAAACGAT CCTATCTTGA GGGCACTCAA GAATGAAAAT 
    CTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7479622 ( XM_024602530.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024458298.1 Populus trichocarpa small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial (LOC7479622), mRNA.
    Price & Availability↑
    CloneID OPa430855
    Clone ID Related Accession (Same CDS sequence) XM_024602530.1
    Accession Version XM_024602530.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1443bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCAAATCC CTTCTTCACT ATCCCTCTTC CGCCATCGCA CTCCCACCTT CTTCCGCCAC 
    CACCCTCTCC TTATCACCGC ATCCAGACAC CACCAAAACC AACCCAATGT CTCCCGCAAA 
    CAACCACCAA GCAAAAACCT CCTCAAAGCC AAAAAAAACC TAACTTCCAA AAAAGACTTC 
    TCCAATCTCT CTCCGATCCT CTCCCCTGAC CACACCCCTA CCAACCTCTC CGATTCTCAA 
    GCCATCGGCA CCGTCGCCGC TTCCCAAGCG AACTTCATGC GCGTGATTGT CACCGCCGAA 
    CCTGAGAAGA TAGAAGATTC TAGTAGTAGT AGTAAAGTTG GAACTGAATT GCTATGCGTG 
    GTTCGGGCGG TGTTGAAGAA GATAAAACGG AGAGTCTTGG TTGGTGATAA GGTGGTGGTT 
    GGGTCAATTG ATTGGGTAGA TAGGAGAGGA ATGATTGAGA ATGTTTTTCA ACGGAGTTCG 
    GATATTTTAG ACCCGCCGGT AGCGAATGTG GATCGGTTGT TGGTTCTTTT TTCGGTTGAG 
    CAACCACAGT TGGAATCATT TGTGTTGACT AGGTTTTTGA TTGAGGCCGA ATCTACTGGG 
    ATTCCGATTA CTCTCGCGTT GAATAAAGCA GAACTTGTTG ATCAACAGGT GTTGAGTGAT 
    TGGGATACTA GATTGAGAAG TTGGGGTTAT GAGCCTCTCT TTTGTAGTGT TGATTCGAAA 
    ATGGGGCTTG ATAGTTTGGC TTCTGTTTTG AGAGATCAAA CGACAGTGAT TGTGGGTCCA 
    AGTGGAGTTG GGAAATCTAG CTTGATTAAT GCTTTGAGGA ATAAACCCAA TTCCCAAGTT 
    GAAGTAGATA ATTGGTTTGA CCCTATAATG GGTAGCAAGT GGTTTGAAGA TCAGCGCGTC 
    GGTAAAGTTT CAACGAGAAG TGGTAGAGGG AAGCACACTA CACGTAACGT CTCTTTGCTT 
    CCACTTGGTG GAGGTGGTTA TCTCGCTGAT ACTCCTGGGT TTAGCCAACC TAGTTTGTTG 
    AAAGTAACAA AGCAATCTCT TGCCCAGTAT TTTCCGGAGA TAAGGAAAAT GCTTGGTGAC 
    AATGAACAGG CTAAATGTGC ATTCAATGAT TGCTTGCATG TTGGCGAACC TGGGTGCATA 
    GTAAAAGGGG ATTGGGAAAG GTATCCCTTG TATTTCCAGC TTCTTGATGA GATCAGAATC 
    AGGGAAGAAT TTCAGTTAAG GACATTTGGA ACCAAGAGGG AAGATGACGT AAGGTACAAG 
    GTTGGAGACA TGGGTGTCAA GCAAGCAGAG CCACGTTTGG AGCCCAAGAA GCATAGAAGA 
    CAGTCTCGCA AAAGGATTAA CCAATCAATA CTAGATGAGT TGAATGAACT TGATGATGAC 
    GAAGATTTGT TGGATGATGA AAACGATCCT ATCTTGAGGG CACTCAAGAA TGAAAATCTT 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024458298.1
    CDS106..1548
    Translation

    Target ORF information:

    RefSeq Version XM_024602530.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial (LOC7479622), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024602530.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGCAAATCC CTTCTTCACT ATCCCTCTTC CGCCATCGCA CTCCCACCTT CTTCCGCCAC 
    CACCCTCTCC TTATCACCGC ATCCAGACAC CACCAAAACC AACCCAATGT CTCCCGCAAA 
    CAACCACCAA GCAAAAACCT CCTCAAAGCC AAAAAAAACC TAACTTCCAA AAAAGACTTC 
    TCCAATCTCT CTCCGATCCT CTCCCCTGAC CACACCCCTA CCAACCTCTC CGATTCTCAA 
    GCCATCGGCA CCGTCGCCGC TTCCCAAGCG AACTTCATGC GCGTGATTGT CACCGCCGAA 
    CCTGAGAAGA TAGAAGATTC TAGTAGTAGT AGTAAAGTTG GAACTGAATT GCTATGCGTG 
    GTTCGGGCGG TGTTGAAGAA GATAAAACGG AGAGTCTTGG TTGGTGATAA GGTGGTGGTT 
    GGGTCAATTG ATTGGGTAGA TAGGAGAGGA ATGATTGAGA ATGTTTTTCA ACGGAGTTCG 
    GATATTTTAG ACCCGCCGGT AGCGAATGTG GATCGGTTGT TGGTTCTTTT TTCGGTTGAG 
    CAACCACAGT TGGAATCATT TGTGTTGACT AGGTTTTTGA TTGAGGCCGA ATCTACTGGG 
    ATTCCGATTA CTCTCGCGTT GAATAAAGCA GAACTTGTTG ATCAACAGGT GTTGAGTGAT 
    TGGGATACTA GATTGAGAAG TTGGGGTTAT GAGCCTCTCT TTTGTAGTGT TGATTCGAAA 
    ATGGGGCTTG ATAGTTTGGC TTCTGTTTTG AGAGATCAAA CGACAGTGAT TGTGGGTCCA 
    AGTGGAGTTG GGAAATCTAG CTTGATTAAT GCTTTGAGGA ATAAACCCAA TTCCCAAGTT 
    GAAGTAGATA ATTGGTTTGA CCCTATAATG GGTAGCAAGT GGTTTGAAGA TCAGCGCGTC 
    GGTAAAGTTT CAACGAGAAG TGGTAGAGGG AAGCACACTA CACGTAACGT CTCTTTGCTT 
    CCACTTGGTG GAGGTGGTTA TCTCGCTGAT ACTCCTGGGT TTAGCCAACC TAGTTTGTTG 
    AAAGTAACAA AGCAATCTCT TGCCCAGTAT TTTCCGGAGA TAAGGAAAAT GCTTGGTGAC 
    AATGAACAGG CTAAATGTGC ATTCAATGAT TGCTTGCATG TTGGCGAACC TGGGTGCATA 
    GTAAAAGGGG ATTGGGAAAG GTATCCCTTG TATTTCCAGC TTCTTGATGA GATCAGAATC 
    AGGGAAGAAT TTCAGTTAAG GACATTTGGA ACCAAGAGGG AAGATGACGT AAGGTACAAG 
    GTTGGAGACA TGGGTGTCAA GCAAGCAGAG CCACGTTTGG AGCCCAAGAA GCATAGAAGA 
    CAGTCTCGCA AAAGGATTAA CCAATCAATA CTAGATGAGT TGAATGAACT TGATGATGAC 
    GAAGATTTGT TGGATGATGA AAACGATCCT ATCTTGAGGG CACTCAAGAA TGAAAATCTT 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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