ORF » Species Summary » Populus trichocarpa » LOC7479509 cDNA ORF clone

LOC7479509 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7479509 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7479509 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa14988 XM_002308315.3
Latest version!		 Populus trichocarpa carbon catabolite repressor protein 4 homolog 1 (LOC7479509), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa14988 XM_024603703.1
Latest version!		 Populus trichocarpa carbon catabolite repressor protein 4 homolog 1 (LOC7479509), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
View Old Accession Versions >>
OPa14988 XM_002308315.2 Populus trichocarpa endonuclease/exonuclease/phosphatase family protein (POPTR_0006s21030g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7479509 ( XM_024603703.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024459471.1 Populus trichocarpa carbon catabolite repressor protein 4 homolog 1 (LOC7479509), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa14988
    Clone ID Related Accession (Same CDS sequence) XM_024603703.1 , XM_002308315.2 , XM_002308315.3
    Accession Version XM_024603703.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1809bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product carbon catabolite repressor protein 4 homolog 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCTGAGCG TGCTGCGTGT GCATCTTCCA TCGGATATTC CTATTGTTGG CTGTGAGTTA 
    ACGCCGTATG TTGTTTTACG GCGACCTGAT AAGGATTATA TTACCGATGA TGTGCCCGAG 
    TCTGCCCCTC TTGACGGTCA TTTCTTGAGA TATAAGTGGT ATCGGATACA GAGTGATAGA 
    AAAGTTGCTG TATGTAGTGT ACATCCATCT GAGCATGCTA CACTGCAGTG TATAGGTTGT 
    GTTAAGGCCA AAATACCTGT TGCCAAAAGT TACCATTGCT CTCCCAAGTG CTTCTCTGAT 
    GCATGGCAGC ATCATCGTGT TCTACATGAT CGAGCTGCAA GTGCTGTAAA TGAAAATGGA 
    AATGAGGAGG AAGAGTTGTT TGGGCGTTAT AATAGCTCAG GATCTGGAGT TCTTAATACT 
    AGTTTATCTG GTTCTGCATC AAGTGCTAGC TTGACAAATG GTTCCACGCC TTTGTATCCT 
    GCGGCGGTGA CACAGAGGAG TGGTGAAACT TGGTTTGAGG TTGGGCGTTC CAAAATATAT 
    ACACCATCAG CTGATGATAT TGGCCATGTT CTCAAGTTTG AATGCGTTGT GGTAGATGCA 
    GAAACTAAAT TACCTGTAGG ACATCCAAAC ACACTATTAA CTTCCCGTGT CATTCCAGCC 
    CCCTCCCCAA CTCCACGTCG TTTGATCCCA GTTAGTGGAC TTGATGCAAT GGTGCCTTTA 
    GATTTGGATG GTCGTATCTC ATCAACTGGA ACCTTTACTG TGCTCTCATA CAACATTTTA 
    TCTGATGTGT ATGCTACAAA TGAAACATAC AGTTATTGTC CTTCATGGGC TCTTTCTTGG 
    CCATATCGTC GACAGAACTT ACTGAGGGAA ATAGTTGGCT ATCGTGCAGA CATTGTTTGT 
    CTTCAGGAGG TACAAAGTGA TCATTATGAG GAATTTTTTG CCCCTGAGCT GGACAAGCAT 
    GGTTATCAAG CCCTATATAA GAGAAAAACT AACGAGGTCT ATGCTGGAAA TACCCATACA 
    ATTGATGGTT GTGCAACATT TTTCCGCAGA GATAGATTTT CACATGTTAA AAAATATGAG 
    GTTGAATTTA ATAAGGCTGC TCAGTCTTTG ACTGATGCGC TGGTTCCAAG TGCTCAAAGA 
    AAAACTGCTC TAAATCGATT AGTTAAGGAT AATGTTGCAT TAATAGTTGT TCTGGAAGCA 
    AAATTTAGTA ATCAAGGAGT TGATAATCCT GGGAAGCGGC AGCTACTTTG TGTTGCAAAT 
    ACACATATAA ATGTTCACCA GGATTTAAAG GATGTCAAGC TTTGGCAGGT CCTTACTCTC 
    TTGAAAGGAT TGGAGAAAAT AGCTGCTAGT GCTGACATTC CTATGTTGGT GTGTGGAGAT 
    TTCAATTCAG TTCCTGGAAG TGCTCCCCAT TCTCTTCTTG CAATGGGTAA GGTGGATCCA 
    TTGCATCCGG ATTTAGTAGT AGACCCTCTT GGAATCTTAC GGCCTCACAA CAAGCTTACA 
    CATCAGCTGC CGCTGGTCAG TGCATACTCA TCTTTTGCAA GAGTGGGCGT TGGTCTTGGT 
    TCAGATCAGC AGAGGAGGAG AATGGACGCT ACAACAAATG AACCCTTATT TACGAATTGC 
    ACTAGAGACT TTATCGGTGC CCTAGATTAT ATATTTTACA CAGCGGACTC TTTAATGGTG 
    GAGTCTTTGT TGGAACTATT GGATGAGGAA AGCTTGAGGA AAGACACAGC CCTTCCTTCT 
    CCAGAGTGGT CTTCAGATCA TATAGCACTT CTTGCTGAAT TTCGTTGCAA GAATAGACCA 
    AGACGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024459471.1
    CDS557..2365
    Translation

    Target ORF information:

    RefSeq Version XM_024603703.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa carbon catabolite repressor protein 4 homolog 1 (LOC7479509), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024603703.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCTGAGCG TGCTGCGTGT GCATCTTCCA TCGGATATTC CTATTGTTGG CTGTGAGTTA 
    ACGCCGTATG TTGTTTTACG GCGACCTGAT AAGGATTATA TTACCGATGA TGTGCCCGAG 
    TCTGCCCCTC TTGACGGTCA TTTCTTGAGA TATAAGTGGT ATCGGATACA GAGTGATAGA 
    AAAGTTGCTG TATGTAGTGT ACATCCATCT GAGCATGCTA CACTGCAGTG TATAGGTTGT 
    GTTAAGGCCA AAATACCTGT TGCCAAAAGT TACCATTGCT CTCCCAAGTG CTTCTCTGAT 
    GCATGGCAGC ATCATCGTGT TCTACATGAT CGAGCTGCAA GTGCTGTAAA TGAAAATGGA 
    AATGAGGAGG AAGAGTTGTT TGGGCGTTAT AATAGCTCAG GATCTGGAGT TCTTAATACT 
    AGTTTATCTG GTTCTGCATC AAGTGCTAGC TTGACAAATG GTTCCACGCC TTTGTATCCT 
    GCGGCGGTGA CACAGAGGAG TGGTGAAACT TGGTTTGAGG TTGGGCGTTC CAAAATATAT 
    ACACCATCAG CTGATGATAT TGGCCATGTT CTCAAGTTTG AATGCGTTGT GGTAGATGCA 
    GAAACTAAAT TACCTGTAGG ACATCCAAAC ACACTATTAA CTTCCCGTGT CATTCCAGCC 
    CCCTCCCCAA CTCCACGTCG TTTGATCCCA GTTAGTGGAC TTGATGCAAT GGTGCCTTTA 
    GATTTGGATG GTCGTATCTC ATCAACTGGA ACCTTTACTG TGCTCTCATA CAACATTTTA 
    TCTGATGTGT ATGCTACAAA TGAAACATAC AGTTATTGTC CTTCATGGGC TCTTTCTTGG 
    CCATATCGTC GACAGAACTT ACTGAGGGAA ATAGTTGGCT ATCGTGCAGA CATTGTTTGT 
    CTTCAGGAGG TACAAAGTGA TCATTATGAG GAATTTTTTG CCCCTGAGCT GGACAAGCAT 
    GGTTATCAAG CCCTATATAA GAGAAAAACT AACGAGGTCT ATGCTGGAAA TACCCATACA 
    ATTGATGGTT GTGCAACATT TTTCCGCAGA GATAGATTTT CACATGTTAA AAAATATGAG 
    GTTGAATTTA ATAAGGCTGC TCAGTCTTTG ACTGATGCGC TGGTTCCAAG TGCTCAAAGA 
    AAAACTGCTC TAAATCGATT AGTTAAGGAT AATGTTGCAT TAATAGTTGT TCTGGAAGCA 
    AAATTTAGTA ATCAAGGAGT TGATAATCCT GGGAAGCGGC AGCTACTTTG TGTTGCAAAT 
    ACACATATAA ATGTTCACCA GGATTTAAAG GATGTCAAGC TTTGGCAGGT CCTTACTCTC 
    TTGAAAGGAT TGGAGAAAAT AGCTGCTAGT GCTGACATTC CTATGTTGGT GTGTGGAGAT 
    TTCAATTCAG TTCCTGGAAG TGCTCCCCAT TCTCTTCTTG CAATGGGTAA GGTGGATCCA 
    TTGCATCCGG ATTTAGTAGT AGACCCTCTT GGAATCTTAC GGCCTCACAA CAAGCTTACA 
    CATCAGCTGC CGCTGGTCAG TGCATACTCA TCTTTTGCAA GAGTGGGCGT TGGTCTTGGT 
    TCAGATCAGC AGAGGAGGAG AATGGACGCT ACAACAAATG AACCCTTATT TACGAATTGC 
    ACTAGAGACT TTATCGGTGC CCTAGATTAT ATATTTTACA CAGCGGACTC TTTAATGGTG 
    GAGTCTTTGT TGGAACTATT GGATGAGGAA AGCTTGAGGA AAGACACAGC CCTTCCTTCT 
    CCAGAGTGGT CTTCAGATCA TATAGCACTT CTTGCTGAAT TTCGTTGCAA GAATAGACCA 
    AGACGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7479509 ( XM_002308315.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002308351.1 Populus trichocarpa endonuclease/exonuclease/phosphatase family protein (POPTR_0006s21030g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa14988
    Clone ID Related Accession (Same CDS sequence) XM_024603703.1 , XM_002308315.2 , XM_002308315.3
    Accession Version XM_002308315.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1809bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product endonuclease/exonuclease/phosphatase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). On Dec 16, 2013 this sequence version replaced XM_002308315.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCTGAGCG TGCTGCGTGT GCATCTTCCA TCGGATATTC CTATTGTTGG CTGTGAGTTA 
    ACGCCGTATG TTGTTTTACG GCGACCTGAT AAGGATTATA TTACCGATGA TGTGCCCGAG 
    TCTGCCCCTC TTGACGGTCA TTTCTTGAGA TATAAGTGGT ATCGGATACA GAGTGATAGA 
    AAAGTTGCTG TATGTAGTGT ACATCCATCT GAGCATGCTA CACTGCAGTG TATAGGTTGT 
    GTTAAGGCCA AAATACCTGT TGCCAAAAGT TACCATTGCT CTCCCAAGTG CTTCTCTGAT 
    GCATGGCAGC ATCATCGTGT TCTACATGAT CGAGCTGCAA GTGCTGTAAA TGAAAATGGA 
    AATGAGGAGG AAGAGTTGTT TGGGCGTTAT AATAGCTCAG GATCTGGAGT TCTTAATACT 
    AGTTTATCTG GTTCTGCATC AAGTGCTAGC TTGACAAATG GTTCCACGCC TTTGTATCCT 
    GCGGCGGTGA CACAGAGGAG TGGTGAAACT TGGTTTGAGG TTGGGCGTTC CAAAATATAT 
    ACACCATCAG CTGATGATAT TGGCCATGTT CTCAAGTTTG AATGCGTTGT GGTAGATGCA 
    GAAACTAAAT TACCTGTAGG ACATCCAAAC ACACTATTAA CTTCCCGTGT CATTCCAGCC 
    CCCTCCCCAA CTCCACGTCG TTTGATCCCA GTTAGTGGAC TTGATGCAAT GGTGCCTTTA 
    GATTTGGATG GTCGTATCTC ATCAACTGGA ACCTTTACTG TGCTCTCATA CAACATTTTA 
    TCTGATGTGT ATGCTACAAA TGAAACATAC AGTTATTGTC CTTCATGGGC TCTTTCTTGG 
    CCATATCGTC GACAGAACTT ACTGAGGGAA ATAGTTGGCT ATCGTGCAGA CATTGTTTGT 
    CTTCAGGAGG TACAAAGTGA TCATTATGAG GAATTTTTTG CCCCTGAGCT GGACAAGCAT 
    GGTTATCAAG CCCTATATAA GAGAAAAACT AACGAGGTCT ATGCTGGAAA TACCCATACA 
    ATTGATGGTT GTGCAACATT TTTCCGCAGA GATAGATTTT CACATGTTAA AAAATATGAG 
    GTTGAATTTA ATAAGGCTGC TCAGTCTTTG ACTGATGCGC TGGTTCCAAG TGCTCAAAGA 
    AAAACTGCTC TAAATCGATT AGTTAAGGAT AATGTTGCAT TAATAGTTGT TCTGGAAGCA 
    AAATTTAGTA ATCAAGGAGT TGATAATCCT GGGAAGCGGC AGCTACTTTG TGTTGCAAAT 
    ACACATATAA ATGTTCACCA GGATTTAAAG GATGTCAAGC TTTGGCAGGT CCTTACTCTC 
    TTGAAAGGAT TGGAGAAAAT AGCTGCTAGT GCTGACATTC CTATGTTGGT GTGTGGAGAT 
    TTCAATTCAG TTCCTGGAAG TGCTCCCCAT TCTCTTCTTG CAATGGGTAA GGTGGATCCA 
    TTGCATCCGG ATTTAGTAGT AGACCCTCTT GGAATCTTAC GGCCTCACAA CAAGCTTACA 
    CATCAGCTGC CGCTGGTCAG TGCATACTCA TCTTTTGCAA GAGTGGGCGT TGGTCTTGGT 
    TCAGATCAGC AGAGGAGGAG AATGGACGCT ACAACAAATG AACCCTTATT TACGAATTGC 
    ACTAGAGACT TTATCGGTGC CCTAGATTAT ATATTTTACA CAGCGGACTC TTTAATGGTG 
    GAGTCTTTGT TGGAACTATT GGATGAGGAA AGCTTGAGGA AAGACACAGC CCTTCCTTCT 
    CCAGAGTGGT CTTCAGATCA TATAGCACTT CTTGCTGAAT TTCGTTGCAA GAATAGACCA 
    AGACGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002308351.1
    CDS559..2367
    Translation

    Target ORF information:

    RefSeq Version XM_002308315.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa endonuclease/exonuclease/phosphatase family protein (POPTR_0006s21030g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002308315.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCTGAGCG TGCTGCGTGT GCATCTTCCA TCGGATATTC CTATTGTTGG CTGTGAGTTA 
    ACGCCGTATG TTGTTTTACG GCGACCTGAT AAGGATTATA TTACCGATGA TGTGCCCGAG 
    TCTGCCCCTC TTGACGGTCA TTTCTTGAGA TATAAGTGGT ATCGGATACA GAGTGATAGA 
    AAAGTTGCTG TATGTAGTGT ACATCCATCT GAGCATGCTA CACTGCAGTG TATAGGTTGT 
    GTTAAGGCCA AAATACCTGT TGCCAAAAGT TACCATTGCT CTCCCAAGTG CTTCTCTGAT 
    GCATGGCAGC ATCATCGTGT TCTACATGAT CGAGCTGCAA GTGCTGTAAA TGAAAATGGA 
    AATGAGGAGG AAGAGTTGTT TGGGCGTTAT AATAGCTCAG GATCTGGAGT TCTTAATACT 
    AGTTTATCTG GTTCTGCATC AAGTGCTAGC TTGACAAATG GTTCCACGCC TTTGTATCCT 
    GCGGCGGTGA CACAGAGGAG TGGTGAAACT TGGTTTGAGG TTGGGCGTTC CAAAATATAT 
    ACACCATCAG CTGATGATAT TGGCCATGTT CTCAAGTTTG AATGCGTTGT GGTAGATGCA 
    GAAACTAAAT TACCTGTAGG ACATCCAAAC ACACTATTAA CTTCCCGTGT CATTCCAGCC 
    CCCTCCCCAA CTCCACGTCG TTTGATCCCA GTTAGTGGAC TTGATGCAAT GGTGCCTTTA 
    GATTTGGATG GTCGTATCTC ATCAACTGGA ACCTTTACTG TGCTCTCATA CAACATTTTA 
    TCTGATGTGT ATGCTACAAA TGAAACATAC AGTTATTGTC CTTCATGGGC TCTTTCTTGG 
    CCATATCGTC GACAGAACTT ACTGAGGGAA ATAGTTGGCT ATCGTGCAGA CATTGTTTGT 
    CTTCAGGAGG TACAAAGTGA TCATTATGAG GAATTTTTTG CCCCTGAGCT GGACAAGCAT 
    GGTTATCAAG CCCTATATAA GAGAAAAACT AACGAGGTCT ATGCTGGAAA TACCCATACA 
    ATTGATGGTT GTGCAACATT TTTCCGCAGA GATAGATTTT CACATGTTAA AAAATATGAG 
    GTTGAATTTA ATAAGGCTGC TCAGTCTTTG ACTGATGCGC TGGTTCCAAG TGCTCAAAGA 
    AAAACTGCTC TAAATCGATT AGTTAAGGAT AATGTTGCAT TAATAGTTGT TCTGGAAGCA 
    AAATTTAGTA ATCAAGGAGT TGATAATCCT GGGAAGCGGC AGCTACTTTG TGTTGCAAAT 
    ACACATATAA ATGTTCACCA GGATTTAAAG GATGTCAAGC TTTGGCAGGT CCTTACTCTC 
    TTGAAAGGAT TGGAGAAAAT AGCTGCTAGT GCTGACATTC CTATGTTGGT GTGTGGAGAT 
    TTCAATTCAG TTCCTGGAAG TGCTCCCCAT TCTCTTCTTG CAATGGGTAA GGTGGATCCA 
    TTGCATCCGG ATTTAGTAGT AGACCCTCTT GGAATCTTAC GGCCTCACAA CAAGCTTACA 
    CATCAGCTGC CGCTGGTCAG TGCATACTCA TCTTTTGCAA GAGTGGGCGT TGGTCTTGGT 
    TCAGATCAGC AGAGGAGGAG AATGGACGCT ACAACAAATG AACCCTTATT TACGAATTGC 
    ACTAGAGACT TTATCGGTGC CCTAGATTAT ATATTTTACA CAGCGGACTC TTTAATGGTG 
    GAGTCTTTGT TGGAACTATT GGATGAGGAA AGCTTGAGGA AAGACACAGC CCTTCCTTCT 
    CCAGAGTGGT CTTCAGATCA TATAGCACTT CTTGCTGAAT TTCGTTGCAA GAATAGACCA 
    AGACGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7479509 ( XM_002308315.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002308351.1 Populus trichocarpa carbon catabolite repressor protein 4 homolog 1 (LOC7479509), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa14988
    Clone ID Related Accession (Same CDS sequence) XM_024603703.1 , XM_002308315.2 , XM_002308315.3
    Accession Version XM_002308315.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1809bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product carbon catabolite repressor protein 4 homolog 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002308315.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCTGAGCG TGCTGCGTGT GCATCTTCCA TCGGATATTC CTATTGTTGG CTGTGAGTTA 
    ACGCCGTATG TTGTTTTACG GCGACCTGAT AAGGATTATA TTACCGATGA TGTGCCCGAG 
    TCTGCCCCTC TTGACGGTCA TTTCTTGAGA TATAAGTGGT ATCGGATACA GAGTGATAGA 
    AAAGTTGCTG TATGTAGTGT ACATCCATCT GAGCATGCTA CACTGCAGTG TATAGGTTGT 
    GTTAAGGCCA AAATACCTGT TGCCAAAAGT TACCATTGCT CTCCCAAGTG CTTCTCTGAT 
    GCATGGCAGC ATCATCGTGT TCTACATGAT CGAGCTGCAA GTGCTGTAAA TGAAAATGGA 
    AATGAGGAGG AAGAGTTGTT TGGGCGTTAT AATAGCTCAG GATCTGGAGT TCTTAATACT 
    AGTTTATCTG GTTCTGCATC AAGTGCTAGC TTGACAAATG GTTCCACGCC TTTGTATCCT 
    GCGGCGGTGA CACAGAGGAG TGGTGAAACT TGGTTTGAGG TTGGGCGTTC CAAAATATAT 
    ACACCATCAG CTGATGATAT TGGCCATGTT CTCAAGTTTG AATGCGTTGT GGTAGATGCA 
    GAAACTAAAT TACCTGTAGG ACATCCAAAC ACACTATTAA CTTCCCGTGT CATTCCAGCC 
    CCCTCCCCAA CTCCACGTCG TTTGATCCCA GTTAGTGGAC TTGATGCAAT GGTGCCTTTA 
    GATTTGGATG GTCGTATCTC ATCAACTGGA ACCTTTACTG TGCTCTCATA CAACATTTTA 
    TCTGATGTGT ATGCTACAAA TGAAACATAC AGTTATTGTC CTTCATGGGC TCTTTCTTGG 
    CCATATCGTC GACAGAACTT ACTGAGGGAA ATAGTTGGCT ATCGTGCAGA CATTGTTTGT 
    CTTCAGGAGG TACAAAGTGA TCATTATGAG GAATTTTTTG CCCCTGAGCT GGACAAGCAT 
    GGTTATCAAG CCCTATATAA GAGAAAAACT AACGAGGTCT ATGCTGGAAA TACCCATACA 
    ATTGATGGTT GTGCAACATT TTTCCGCAGA GATAGATTTT CACATGTTAA AAAATATGAG 
    GTTGAATTTA ATAAGGCTGC TCAGTCTTTG ACTGATGCGC TGGTTCCAAG TGCTCAAAGA 
    AAAACTGCTC TAAATCGATT AGTTAAGGAT AATGTTGCAT TAATAGTTGT TCTGGAAGCA 
    AAATTTAGTA ATCAAGGAGT TGATAATCCT GGGAAGCGGC AGCTACTTTG TGTTGCAAAT 
    ACACATATAA ATGTTCACCA GGATTTAAAG GATGTCAAGC TTTGGCAGGT CCTTACTCTC 
    TTGAAAGGAT TGGAGAAAAT AGCTGCTAGT GCTGACATTC CTATGTTGGT GTGTGGAGAT 
    TTCAATTCAG TTCCTGGAAG TGCTCCCCAT TCTCTTCTTG CAATGGGTAA GGTGGATCCA 
    TTGCATCCGG ATTTAGTAGT AGACCCTCTT GGAATCTTAC GGCCTCACAA CAAGCTTACA 
    CATCAGCTGC CGCTGGTCAG TGCATACTCA TCTTTTGCAA GAGTGGGCGT TGGTCTTGGT 
    TCAGATCAGC AGAGGAGGAG AATGGACGCT ACAACAAATG AACCCTTATT TACGAATTGC 
    ACTAGAGACT TTATCGGTGC CCTAGATTAT ATATTTTACA CAGCGGACTC TTTAATGGTG 
    GAGTCTTTGT TGGAACTATT GGATGAGGAA AGCTTGAGGA AAGACACAGC CCTTCCTTCT 
    CCAGAGTGGT CTTCAGATCA TATAGCACTT CTTGCTGAAT TTCGTTGCAA GAATAGACCA 
    AGACGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002308351.1
    CDS556..2364
    Translation

    Target ORF information:

    RefSeq Version XM_002308315.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa carbon catabolite repressor protein 4 homolog 1 (LOC7479509), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002308315.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGCTGAGCG TGCTGCGTGT GCATCTTCCA TCGGATATTC CTATTGTTGG CTGTGAGTTA 
    ACGCCGTATG TTGTTTTACG GCGACCTGAT AAGGATTATA TTACCGATGA TGTGCCCGAG 
    TCTGCCCCTC TTGACGGTCA TTTCTTGAGA TATAAGTGGT ATCGGATACA GAGTGATAGA 
    AAAGTTGCTG TATGTAGTGT ACATCCATCT GAGCATGCTA CACTGCAGTG TATAGGTTGT 
    GTTAAGGCCA AAATACCTGT TGCCAAAAGT TACCATTGCT CTCCCAAGTG CTTCTCTGAT 
    GCATGGCAGC ATCATCGTGT TCTACATGAT CGAGCTGCAA GTGCTGTAAA TGAAAATGGA 
    AATGAGGAGG AAGAGTTGTT TGGGCGTTAT AATAGCTCAG GATCTGGAGT TCTTAATACT 
    AGTTTATCTG GTTCTGCATC AAGTGCTAGC TTGACAAATG GTTCCACGCC TTTGTATCCT 
    GCGGCGGTGA CACAGAGGAG TGGTGAAACT TGGTTTGAGG TTGGGCGTTC CAAAATATAT 
    ACACCATCAG CTGATGATAT TGGCCATGTT CTCAAGTTTG AATGCGTTGT GGTAGATGCA 
    GAAACTAAAT TACCTGTAGG ACATCCAAAC ACACTATTAA CTTCCCGTGT CATTCCAGCC 
    CCCTCCCCAA CTCCACGTCG TTTGATCCCA GTTAGTGGAC TTGATGCAAT GGTGCCTTTA 
    GATTTGGATG GTCGTATCTC ATCAACTGGA ACCTTTACTG TGCTCTCATA CAACATTTTA 
    TCTGATGTGT ATGCTACAAA TGAAACATAC AGTTATTGTC CTTCATGGGC TCTTTCTTGG 
    CCATATCGTC GACAGAACTT ACTGAGGGAA ATAGTTGGCT ATCGTGCAGA CATTGTTTGT 
    CTTCAGGAGG TACAAAGTGA TCATTATGAG GAATTTTTTG CCCCTGAGCT GGACAAGCAT 
    GGTTATCAAG CCCTATATAA GAGAAAAACT AACGAGGTCT ATGCTGGAAA TACCCATACA 
    ATTGATGGTT GTGCAACATT TTTCCGCAGA GATAGATTTT CACATGTTAA AAAATATGAG 
    GTTGAATTTA ATAAGGCTGC TCAGTCTTTG ACTGATGCGC TGGTTCCAAG TGCTCAAAGA 
    AAAACTGCTC TAAATCGATT AGTTAAGGAT AATGTTGCAT TAATAGTTGT TCTGGAAGCA 
    AAATTTAGTA ATCAAGGAGT TGATAATCCT GGGAAGCGGC AGCTACTTTG TGTTGCAAAT 
    ACACATATAA ATGTTCACCA GGATTTAAAG GATGTCAAGC TTTGGCAGGT CCTTACTCTC 
    TTGAAAGGAT TGGAGAAAAT AGCTGCTAGT GCTGACATTC CTATGTTGGT GTGTGGAGAT 
    TTCAATTCAG TTCCTGGAAG TGCTCCCCAT TCTCTTCTTG CAATGGGTAA GGTGGATCCA 
    TTGCATCCGG ATTTAGTAGT AGACCCTCTT GGAATCTTAC GGCCTCACAA CAAGCTTACA 
    CATCAGCTGC CGCTGGTCAG TGCATACTCA TCTTTTGCAA GAGTGGGCGT TGGTCTTGGT 
    TCAGATCAGC AGAGGAGGAG AATGGACGCT ACAACAAATG AACCCTTATT TACGAATTGC 
    ACTAGAGACT TTATCGGTGC CCTAGATTAT ATATTTTACA CAGCGGACTC TTTAATGGTG 
    GAGTCTTTGT TGGAACTATT GGATGAGGAA AGCTTGAGGA AAGACACAGC CCTTCCTTCT 
    CCAGAGTGGT CTTCAGATCA TATAGCACTT CTTGCTGAAT TTCGTTGCAA GAATAGACCA 
    AGACGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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