ORF » Species Summary » Populus trichocarpa » LOC7478868 cDNA ORF clone

LOC7478868 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7478868 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7478868 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27959 XM_002319413.3
Latest version!		 Populus trichocarpa transcription factor MYB61 (LOC7478868), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa27959 XM_002319413.2 Populus trichocarpa hypothetical protein (POPTR_0013s00290g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7478868 ( XM_002319413.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002319449.1 Populus trichocarpa hypothetical protein (POPTR_0013s00290g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27959
    Clone ID Related Accession (Same CDS sequence) XM_002319413.2 , XM_002319413.3
    Accession Version XM_002319413.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1341bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). On Dec 16, 2013 this sequence version replaced XM_002319413.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGGCGGC ATTCTTGCTG TTACAAGCAG AAGTTAAGAA AAGGCCTGTG GTCTCCTGAG 
    GAAGATGAGA AACTTCTTAA TTATATTACT AAGCATGGAC TTGGTTGTTG GAGCTCTGTC 
    CCTAAACTGG CAGGTTTGCA GAGATGTGGT AAGAGCTGCA GGTTAAGGTG GATTAACTAC 
    TTGAGGCCTG ATTTGAAGAG AGGAGCATTT TCTCAGCAGG AAGAGAACTT GATTATTGAA 
    CTCCATGCAG TTCTTGGCAA TAGATGGTCT CAGATTGCAG CACAGTTACC TGGAAGAACT 
    GATAATGAGA TAAAGAATTT ATGGAATTCC TGCATTAAGA AGAAACTGAG GCAGAGAGGC 
    ATTGACCCCA ACACTCACAA ATCACTTTCT GAAGCTGAGG ATGGTAAAGG GAAGCAGCAG 
    CTCACAGCTG ACAAAAGCAA TGAGAAAGTT TCTATTGTAT CAAATGAACT GAACCTCATT 
    AAGACAGCTA CTTTAAAACC ACCTGCAGTT TCTTCCAGAA GCTCAAACGT CATCACCACC 
    AACAACAATA AGGACAGAAG TGGTAGTAGC AACTTGACAA ATGTTCCACC GACACAGGAA 
    TTCTTCCTCG ACAGGTTTGG TACCTCCCAT GAAAGCTCCA CCACGGCCAG TTGCATGCCT 
    TCTGATTTGA TGGATTATTT CCCTTTCCAG AAATTGGATT ACAAACCTAT TATAGACCTC 
    TCAATGAATC CAAACTCCAC TCTCTGCTTT AATCCAAATT CCTCCTCTTC TGAGATGATT 
    TCTCATGAGT TCAATTCTAG TATGACACCT CCGACTATTC TCCCATCCGT GTCAACCTCT 
    ATGTTCCAGA CTCCAATATG TGTAAAACCT TCTGTTAGTC TTCCATCTGA TCATAATCCT 
    TCTGTAGGCT CTTGTGATGT CAATGGGGTT CAGAACTGGG AAGCAAGTAG CTTCAGCAAC 
    AACGGAAGTG GAAGCAATGG AAGCAGTAGC AGTATTGAAT TGCAAAGCAA CACCAATTTC 
    TTTGAGAGCA GCGCCTTCTC GTGGGGTTTA GCTGATTGTG GGAAATCCAG CGACGAAGCT 
    CACCTTCGAT CTCTCGCAAA CGAGACGGTT GAAGACATCA AATGGTCTGA ATACCTTAGC 
    ACCCCATTCT TTCTTGGAAG CACAATACAA AACCAAACAT CTCAACATGT GTACAGTGAA 
    GTGAAACCTG AAACACACTT CATAGCACAA GGGTCAAGTA CTAGTTGGCT AAAGAATCAA 
    CATCAACAAG CTTCACAGCC AGCAGACATC TATACCAAGG ATCTGCAAAG ACTTGCTGTG 
    GCTTTTGGTC AATCCATATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319449.1
    CDS258..1598
    Translation

    Target ORF information:

    RefSeq Version XM_002319413.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s00290g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319413.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGGCGGC ATTCTTGCTG TTACAAGCAG AAGTTAAGAA AAGGCCTGTG GTCTCCTGAG 
    GAAGATGAGA AACTTCTTAA TTATATTACT AAGCATGGAC TTGGTTGTTG GAGCTCTGTC 
    CCTAAACTGG CAGGTTTGCA GAGATGTGGT AAGAGCTGCA GGTTAAGGTG GATTAACTAC 
    TTGAGGCCTG ATTTGAAGAG AGGAGCATTT TCTCAGCAGG AAGAGAACTT GATTATTGAA 
    CTCCATGCAG TTCTTGGCAA TAGATGGTCT CAGATTGCAG CACAGTTACC TGGAAGAACT 
    GATAATGAGA TAAAGAATTT ATGGAATTCC TGCATTAAGA AGAAACTGAG GCAGAGAGGC 
    ATTGACCCCA ACACTCACAA ATCACTTTCT GAAGCTGAGG ATGGTAAAGG GAAGCAGCAG 
    CTCACAGCTG ACAAAAGCAA TGAGAAAGTT TCTATTGTAT CAAATGAACT GAACCTCATT 
    AAGACAGCTA CTTTAAAACC ACCTGCAGTT TCTTCCAGAA GCTCAAACGT CATCACCACC 
    AACAACAATA AGGACAGAAG TGGTAGTAGC AACTTGACAA ATGTTCCACC GACACAGGAA 
    TTCTTCCTCG ACAGGTTTGG TACCTCCCAT GAAAGCTCCA CCACGGCCAG TTGCATGCCT 
    TCTGATTTGA TGGATTATTT CCCTTTCCAG AAATTGGATT ACAAACCTAT TATAGACCTC 
    TCAATGAATC CAAACTCCAC TCTCTGCTTT AATCCAAATT CCTCCTCTTC TGAGATGATT 
    TCTCATGAGT TCAATTCTAG TATGACACCT CCGACTATTC TCCCATCCGT GTCAACCTCT 
    ATGTTCCAGA CTCCAATATG TGTAAAACCT TCTGTTAGTC TTCCATCTGA TCATAATCCT 
    TCTGTAGGCT CTTGTGATGT CAATGGGGTT CAGAACTGGG AAGCAAGTAG CTTCAGCAAC 
    AACGGAAGTG GAAGCAATGG AAGCAGTAGC AGTATTGAAT TGCAAAGCAA CACCAATTTC 
    TTTGAGAGCA GCGCCTTCTC GTGGGGTTTA GCTGATTGTG GGAAATCCAG CGACGAAGCT 
    CACCTTCGAT CTCTCGCAAA CGAGACGGTT GAAGACATCA AATGGTCTGA ATACCTTAGC 
    ACCCCATTCT TTCTTGGAAG CACAATACAA AACCAAACAT CTCAACATGT GTACAGTGAA 
    GTGAAACCTG AAACACACTT CATAGCACAA GGGTCAAGTA CTAGTTGGCT AAAGAATCAA 
    CATCAACAAG CTTCACAGCC AGCAGACATC TATACCAAGG ATCTGCAAAG ACTTGCTGTG 
    GCTTTTGGTC AATCCATATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7478868 ( XM_002319413.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002319449.1 Populus trichocarpa transcription factor MYB61 (LOC7478868), mRNA.
    Price & Availability↑
    CloneID OPa27959
    Clone ID Related Accession (Same CDS sequence) XM_002319413.2 , XM_002319413.3
    Accession Version XM_002319413.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1341bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product transcription factor MYB61
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002319413.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGGCGGC ATTCTTGCTG TTACAAGCAG AAGTTAAGAA AAGGCCTGTG GTCTCCTGAG 
    GAAGATGAGA AACTTCTTAA TTATATTACT AAGCATGGAC TTGGTTGTTG GAGCTCTGTC 
    CCTAAACTGG CAGGTTTGCA GAGATGTGGT AAGAGCTGCA GGTTAAGGTG GATTAACTAC 
    TTGAGGCCTG ATTTGAAGAG AGGAGCATTT TCTCAGCAGG AAGAGAACTT GATTATTGAA 
    CTCCATGCAG TTCTTGGCAA TAGATGGTCT CAGATTGCAG CACAGTTACC TGGAAGAACT 
    GATAATGAGA TAAAGAATTT ATGGAATTCC TGCATTAAGA AGAAACTGAG GCAGAGAGGC 
    ATTGACCCCA ACACTCACAA ATCACTTTCT GAAGCTGAGG ATGGTAAAGG GAAGCAGCAG 
    CTCACAGCTG ACAAAAGCAA TGAGAAAGTT TCTATTGTAT CAAATGAACT GAACCTCATT 
    AAGACAGCTA CTTTAAAACC ACCTGCAGTT TCTTCCAGAA GCTCAAACGT CATCACCACC 
    AACAACAATA AGGACAGAAG TGGTAGTAGC AACTTGACAA ATGTTCCACC GACACAGGAA 
    TTCTTCCTCG ACAGGTTTGG TACCTCCCAT GAAAGCTCCA CCACGGCCAG TTGCATGCCT 
    TCTGATTTGA TGGATTATTT CCCTTTCCAG AAATTGGATT ACAAACCTAT TATAGACCTC 
    TCAATGAATC CAAACTCCAC TCTCTGCTTT AATCCAAATT CCTCCTCTTC TGAGATGATT 
    TCTCATGAGT TCAATTCTAG TATGACACCT CCGACTATTC TCCCATCCGT GTCAACCTCT 
    ATGTTCCAGA CTCCAATATG TGTAAAACCT TCTGTTAGTC TTCCATCTGA TCATAATCCT 
    TCTGTAGGCT CTTGTGATGT CAATGGGGTT CAGAACTGGG AAGCAAGTAG CTTCAGCAAC 
    AACGGAAGTG GAAGCAATGG AAGCAGTAGC AGTATTGAAT TGCAAAGCAA CACCAATTTC 
    TTTGAGAGCA GCGCCTTCTC GTGGGGTTTA GCTGATTGTG GGAAATCCAG CGACGAAGCT 
    CACCTTCGAT CTCTCGCAAA CGAGACGGTT GAAGACATCA AATGGTCTGA ATACCTTAGC 
    ACCCCATTCT TTCTTGGAAG CACAATACAA AACCAAACAT CTCAACATGT GTACAGTGAA 
    GTGAAACCTG AAACACACTT CATAGCACAA GGGTCAAGTA CTAGTTGGCT AAAGAATCAA 
    CATCAACAAG CTTCACAGCC AGCAGACATC TATACCAAGG ATCTGCAAAG ACTTGCTGTG 
    GCTTTTGGTC AATCCATATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319449.1
    CDS423..1763
    Translation

    Target ORF information:

    RefSeq Version XM_002319413.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa transcription factor MYB61 (LOC7478868), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002319413.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGGGCGGC ATTCTTGCTG TTACAAGCAG AAGTTAAGAA AAGGCCTGTG GTCTCCTGAG 
    GAAGATGAGA AACTTCTTAA TTATATTACT AAGCATGGAC TTGGTTGTTG GAGCTCTGTC 
    CCTAAACTGG CAGGTTTGCA GAGATGTGGT AAGAGCTGCA GGTTAAGGTG GATTAACTAC 
    TTGAGGCCTG ATTTGAAGAG AGGAGCATTT TCTCAGCAGG AAGAGAACTT GATTATTGAA 
    CTCCATGCAG TTCTTGGCAA TAGATGGTCT CAGATTGCAG CACAGTTACC TGGAAGAACT 
    GATAATGAGA TAAAGAATTT ATGGAATTCC TGCATTAAGA AGAAACTGAG GCAGAGAGGC 
    ATTGACCCCA ACACTCACAA ATCACTTTCT GAAGCTGAGG ATGGTAAAGG GAAGCAGCAG 
    CTCACAGCTG ACAAAAGCAA TGAGAAAGTT TCTATTGTAT CAAATGAACT GAACCTCATT 
    AAGACAGCTA CTTTAAAACC ACCTGCAGTT TCTTCCAGAA GCTCAAACGT CATCACCACC 
    AACAACAATA AGGACAGAAG TGGTAGTAGC AACTTGACAA ATGTTCCACC GACACAGGAA 
    TTCTTCCTCG ACAGGTTTGG TACCTCCCAT GAAAGCTCCA CCACGGCCAG TTGCATGCCT 
    TCTGATTTGA TGGATTATTT CCCTTTCCAG AAATTGGATT ACAAACCTAT TATAGACCTC 
    TCAATGAATC CAAACTCCAC TCTCTGCTTT AATCCAAATT CCTCCTCTTC TGAGATGATT 
    TCTCATGAGT TCAATTCTAG TATGACACCT CCGACTATTC TCCCATCCGT GTCAACCTCT 
    ATGTTCCAGA CTCCAATATG TGTAAAACCT TCTGTTAGTC TTCCATCTGA TCATAATCCT 
    TCTGTAGGCT CTTGTGATGT CAATGGGGTT CAGAACTGGG AAGCAAGTAG CTTCAGCAAC 
    AACGGAAGTG GAAGCAATGG AAGCAGTAGC AGTATTGAAT TGCAAAGCAA CACCAATTTC 
    TTTGAGAGCA GCGCCTTCTC GTGGGGTTTA GCTGATTGTG GGAAATCCAG CGACGAAGCT 
    CACCTTCGAT CTCTCGCAAA CGAGACGGTT GAAGACATCA AATGGTCTGA ATACCTTAGC 
    ACCCCATTCT TTCTTGGAAG CACAATACAA AACCAAACAT CTCAACATGT GTACAGTGAA 
    GTGAAACCTG AAACACACTT CATAGCACAA GGGTCAAGTA CTAGTTGGCT AAAGAATCAA 
    CATCAACAAG CTTCACAGCC AGCAGACATC TATACCAAGG ATCTGCAAAG ACTTGCTGTG 
    GCTTTTGGTC AATCCATATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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