LOC7478534 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7478534 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7478534 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01394 XM_002299777.2
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0001s25810g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa420380 XM_002299777.3
Latest version!
Populus trichocarpa protein DAMAGED DNA-BINDING 2 (LOC7478534), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa01394
    Clone ID Related Accession (Same CDS sequence) XM_002299777.2
    Accession Version XM_002299777.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1695bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002299777.1.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCCCCTC GGACAAGAAG AATGGCGTTT CCGAAAGTGT TGATTGAGAG AGACACCGAC 
    TCCGAGCAAA GTTCTTCATC GGACGATGAA GATGAGTTGG AAGAAGAAGA TGAGGGCCCA
    CCATCAGAAT CAGAACCAGA AGAGGAGGAT TCAACCAAAA ATGGATACGA AGAGAGAATA
    GAAGAAGATT TAAGTTTAAA AAAGAAAGGA AAAGCACCCA TCACTATTAG TCTCAAGAAA
    GTTTGCAAAG TGTGTAAGAA ACCGGGACAT GAAGCGGGAT TTAAAGGAGC AACATACATA
    GATTGTCCTA TGAAACCTTG CTTTCTCTGC AAAATGCCAG GCCACACTAC AATGACATGC
    CCGCATAGAG TGGCAATTGA GCATGGTGTA ATCCCAGCAC CCCGTACAAG TACTCATAAT
    ACAGTGGAAT ATGTCTTACA GCGCCAGCTT AGACCAAGAA TCCTTCCAAT AAAACCAGCA
    TATGTTATAC CAGATCAAGT TTGTTGTGCA GTTATCAGAT ACCACAGCAG GCGAGTAACA
    TGTTTGGAAT TTCATCCAAC AAAAAATAAC ATCCTTTTAT CTGGAGATAA GAAAGGACAA
    GTTGGAGTTT GGGATTTTGA CAAAGTGCAT GAAAGGATGG TTTATCAAAA CATACACACT
    TGTATTGTAA ATAACATGAG GTTTAAATCT ACAAATGATG GTATGGTATA TGCTGCATCC
    TCTGATGGAA CAATTAGTAG CACTGATTTG GAGACTGGAA TGTCATCATC TCTGATGAAC
    CTTAATCCTA ATGGCTGGCA GGGTCCAAGT AATTGGAGAA TGCTTTATGG CATGGATATC
    AATTCAGAGA AAGGTGTTGT GCTTGTTGCT GACAACTTTG GTTTTCTCTA CATGGTGGAT
    ACACGATCCA ACAGTAAAAT TGGGGAGGCA ATTTTGATCC ATAAGAAAGG TAGCAAAGTT
    GTTGGACTTC ATTGCAATCC AGTTCAACCA GAGCTTCTTT TGAGCTGTGG AAATGATCAT
    TTTGCTCGTA TATGGGATAT GCGTCAACTG AAAGCTGGAT CATCTCTTTC TGACCTTGCA
    CACAAACGCG TTGTTAACTC TGCATATTTT TCTCCATTGT CTGGTAGCAA GATTCTTACC
    ACTTCACAAG ACAACCGCCT GCGTATTTGG GATTCTATAT TTGGAAACTT GGACTCCCCA
    AGCCGAGAAA TCGTACACAG TCATGATTTT AACAGACATC TGACCCCTTT CCGTGCTGAA
    TGGGATCCAA AGGATCCAAC AGAGTCCCTT GCAGTTATTG GTCGCTACAT AAGCGAAAAT
    TACAATGGAG CTGCCTTGCA TCCGATTGAT TTTATTGACA TTAGCACTGG GCAACTAGTT
    GCTGAAGTTA TGGATCCAAA CATCACCACC ATTAGTCCTG TGAACAAGCT ACATCCACGA
    GATGATATTT TGGCATCTGG CAGTTCGAGG TCCCTTTTCA TTTGGAGGCC AAAGGAGAAG
    TCTGAACCTG TGGAAAAGAA AGATGAAAGC AAGATTATTA TTTGTGGAGG TGCTATGAAA
    AAGCGTAAAG GCAAGTTTCG TGGTGAAAGT GATGATGATT CTGAAGATGA TGGATGTGTA
    TCCAAGGGCA AGAATTTTCA ATTTAAAAAG GCTGAATCAA AATCAGCTCC CAGACCTCGC
    AAGGTTAACA AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299813.2
    CDS8..1702
    Translation

    Target ORF information:

    RefSeq Version XM_002299777.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0001s25810g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002299777.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCCCCTC GGACAAGAAG AATGGCGTTT CCGAAAGTGT TGATTGAGAG AGACACCGAC 
    TCCGAGCAAA GTTCTTCATC GGACGATGAA GATGAGTTGG AAGAAGAAGA TGAGGGCCCA
    CCATCAGAAT CAGAACCAGA AGAGGAGGAT TCAACCAAAA ATGGATACGA AGAGAGAATA
    GAAGAAGATT TAAGTTTAAA AAAGAAAGGA AAAGCACCCA TCACTATTAG TCTCAAGAAA
    GTTTGCAAAG TGTGTAAGAA ACCGGGACAT GAAGCGGGAT TTAAAGGAGC AACATACATA
    GATTGTCCTA TGAAACCTTG CTTTCTCTGC AAAATGCCAG GCCACACTAC AATGACATGC
    CCGCATAGAG TGGCAATTGA GCATGGTGTA ATCCCAGCAC CCCGTACAAG TACTCATAAT
    ACAGTGGAAT ATGTCTTACA GCGCCAGCTT AGACCAAGAA TCCTTCCAAT AAAACCAGCA
    TATGTTATAC CAGATCAAGT TTGTTGTGCA GTTATCAGAT ACCACAGCAG GCGAGTAACA
    TGTTTGGAAT TTCATCCAAC AAAAAATAAC ATCCTTTTAT CTGGAGATAA GAAAGGACAA
    GTTGGAGTTT GGGATTTTGA CAAAGTGCAT GAAAGGATGG TTTATCAAAA CATACACACT
    TGTATTGTAA ATAACATGAG GTTTAAATCT ACAAATGATG GTATGGTATA TGCTGCATCC
    TCTGATGGAA CAATTAGTAG CACTGATTTG GAGACTGGAA TGTCATCATC TCTGATGAAC
    CTTAATCCTA ATGGCTGGCA GGGTCCAAGT AATTGGAGAA TGCTTTATGG CATGGATATC
    AATTCAGAGA AAGGTGTTGT GCTTGTTGCT GACAACTTTG GTTTTCTCTA CATGGTGGAT
    ACACGATCCA ACAGTAAAAT TGGGGAGGCA ATTTTGATCC ATAAGAAAGG TAGCAAAGTT
    GTTGGACTTC ATTGCAATCC AGTTCAACCA GAGCTTCTTT TGAGCTGTGG AAATGATCAT
    TTTGCTCGTA TATGGGATAT GCGTCAACTG AAAGCTGGAT CATCTCTTTC TGACCTTGCA
    CACAAACGCG TTGTTAACTC TGCATATTTT TCTCCATTGT CTGGTAGCAA GATTCTTACC
    ACTTCACAAG ACAACCGCCT GCGTATTTGG GATTCTATAT TTGGAAACTT GGACTCCCCA
    AGCCGAGAAA TCGTACACAG TCATGATTTT AACAGACATC TGACCCCTTT CCGTGCTGAA
    TGGGATCCAA AGGATCCAAC AGAGTCCCTT GCAGTTATTG GTCGCTACAT AAGCGAAAAT
    TACAATGGAG CTGCCTTGCA TCCGATTGAT TTTATTGACA TTAGCACTGG GCAACTAGTT
    GCTGAAGTTA TGGATCCAAA CATCACCACC ATTAGTCCTG TGAACAAGCT ACATCCACGA
    GATGATATTT TGGCATCTGG CAGTTCGAGG TCCCTTTTCA TTTGGAGGCC AAAGGAGAAG
    TCTGAACCTG TGGAAAAGAA AGATGAAAGC AAGATTATTA TTTGTGGAGG TGCTATGAAA
    AAGCGTAAAG GCAAGTTTCG TGGTGAAAGT GATGATGATT CTGAAGATGA TGGATGTGTA
    TCCAAGGGCA AGAATTTTCA ATTTAAAAAG GCTGAATCAA AATCAGCTCC CAGACCTCGC
    AAGGTTAACA AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa420380
    Clone ID Related Accession (Same CDS sequence) XM_002299777.3
    Accession Version XM_002299777.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1695bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product protein DAMAGED DNA-BINDING 2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002299777.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCCCCTC GGACAAGAAG AATGGCGTTT CCGAAAGTGT TGATTGAGAG AGACACCGAC 
    TCCGAGCAAA GTTCTTCATC GGACGATGAA GATGAGTTGG AAGAAGAAGA TGAGGGCCCA
    CCATCAGAAT CAGAACCAGA AGAGGAGGAT TCAACCAAAA ATGGATACGA AGAGAGAATA
    GAAGAAGATT TAAGTTTAAA AAAGAAAGGA AAAGCACCCA TCACTATTAG TCTCAAGAAA
    GTTTGCAAAG TGTGTAAGAA ACCGGGACAT GAAGCGGGAT TTAAAGGAGC AACATACATA
    GATTGTCCTA TGAAACCTTG CTTTCTCTGC AAAATGCCAG GCCACACTAC AATGACATGC
    CCGCATAGAG TGGCAATTGA GCATGGTGTA ATCCCAGCAC CCCGTACAAG TACTCATAAT
    ACAGTGGAAT ATGTCTTACA GCGCCAGCTT AGACCAAGAA TCCTTCCAAT AAAACCAGCA
    TATGTTATAC CAGATCAAGT TTGTTGTGCA GTTATCAGAT ACCACAGCAG GCGAGTAACA
    TGTTTGGAAT TTCATCCAAC AAAAAATAAC ATCCTTTTAT CTGGAGATAA GAAAGGACAA
    GTTGGAGTTT GGGATTTTGA CAAAGTGCAT GAAAGGATGG TTTATCAAAA CATACACACT
    TGTATTGTAA ATAACATGAG GTTTAAATCT ACAAATGATG GTATGGTATA TGCTGCATCC
    TCTGATGGAA CAATTAGTAG CACTGATTTG GAGACTGGAA TGTCATCATC TCTGATGAAC
    CTTAATCCTA ATGGCTGGCA GGGTCCAAGT AATTGGAGAA TGCTTTATGG CATGGATATC
    AATTCAGAGA AAGGTGTTGT GCTTGTTGCT GACAACTTTG GTTTTCTCTA CATGGTGGAT
    ACACGATCCA ACAGTAAAAT TGGGGAGGCA ATTTTGATCC ATAAGAAAGG TAGCAAAGTT
    GTTGGACTTC ATTGCAATCC AGTTCAACCA GAGCTTCTTT TGAGCTGTGG AAATGATCAT
    TTTGCTCGTA TATGGGATAT GCGTCAACTG AAAGCTGGAT CATCTCTTTC TGACCTTGCA
    CACAAACGCG TTGTTAACTC TGCATATTTT TCTCCATTGT CTGGTAGCAA GATTCTTACC
    ACTTCACAAG ACAACCGCCT GCGTATTTGG GATTCTATAT TTGGAAACTT GGACTCCCCA
    AGCCGAGAAA TCGTACACAG TCATGATTTT AACAGACATC TGACCCCTTT CCGTGCTGAA
    TGGGATCCAA AGGATCCAAC AGAGTCCCTT GCAGTTATTG GTCGCTACAT AAGTGAAAAT
    TACAATGGAG CTGCCTTGCA TCCGATTGAT TTTATTGACA TTAGCACTGG GCAACTAGTT
    GCTGAAGTTA TGGATCCAAA CATCACCACC ATTAGTCCTG TGAACAAGCT ACATCCACGA
    GATGATATTT TGGCTTCTGG CAGTTCGAGG TCCCTTTTCA TTTGGAGGCC AAAGGAGAAG
    TCTGAACCTG TGGAAAAGAA AGATGAAAGC AAGATTATTA TTTGTGGAGG TGCTATGAAA
    AAGCGTAAAG GCAAGTTTCG TGGTGAAAGT GATGATGATT CTGAAGATGA TGGATGTGTA
    TCCAAGGGCA AGAATTTTCA ATTTAAAAAG GCTGAATCAA AATCAGCTCC CAGACCTCGC
    AAGGTTAACA AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299813.2
    CDS195..1889
    Translation

    Target ORF information:

    RefSeq Version XM_002299777.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein DAMAGED DNA-BINDING 2 (LOC7478534), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_002299777.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCCCCTC GGACAAGAAG AATGGCGTTT CCGAAAGTGT TGATTGAGAG AGACACCGAC 
    TCCGAGCAAA GTTCTTCATC GGACGATGAA GATGAGTTGG AAGAAGAAGA TGAGGGCCCA
    CCATCAGAAT CAGAACCAGA AGAGGAGGAT TCAACCAAAA ATGGATACGA AGAGAGAATA
    GAAGAAGATT TAAGTTTAAA AAAGAAAGGA AAAGCACCCA TCACTATTAG TCTCAAGAAA
    GTTTGCAAAG TGTGTAAGAA ACCGGGACAT GAAGCGGGAT TTAAAGGAGC AACATACATA
    GATTGTCCTA TGAAACCTTG CTTTCTCTGC AAAATGCCAG GCCACACTAC AATGACATGC
    CCGCATAGAG TGGCAATTGA GCATGGTGTA ATCCCAGCAC CCCGTACAAG TACTCATAAT
    ACAGTGGAAT ATGTCTTACA GCGCCAGCTT AGACCAAGAA TCCTTCCAAT AAAACCAGCA
    TATGTTATAC CAGATCAAGT TTGTTGTGCA GTTATCAGAT ACCACAGCAG GCGAGTAACA
    TGTTTGGAAT TTCATCCAAC AAAAAATAAC ATCCTTTTAT CTGGAGATAA GAAAGGACAA
    GTTGGAGTTT GGGATTTTGA CAAAGTGCAT GAAAGGATGG TTTATCAAAA CATACACACT
    TGTATTGTAA ATAACATGAG GTTTAAATCT ACAAATGATG GTATGGTATA TGCTGCATCC
    TCTGATGGAA CAATTAGTAG CACTGATTTG GAGACTGGAA TGTCATCATC TCTGATGAAC
    CTTAATCCTA ATGGCTGGCA GGGTCCAAGT AATTGGAGAA TGCTTTATGG CATGGATATC
    AATTCAGAGA AAGGTGTTGT GCTTGTTGCT GACAACTTTG GTTTTCTCTA CATGGTGGAT
    ACACGATCCA ACAGTAAAAT TGGGGAGGCA ATTTTGATCC ATAAGAAAGG TAGCAAAGTT
    GTTGGACTTC ATTGCAATCC AGTTCAACCA GAGCTTCTTT TGAGCTGTGG AAATGATCAT
    TTTGCTCGTA TATGGGATAT GCGTCAACTG AAAGCTGGAT CATCTCTTTC TGACCTTGCA
    CACAAACGCG TTGTTAACTC TGCATATTTT TCTCCATTGT CTGGTAGCAA GATTCTTACC
    ACTTCACAAG ACAACCGCCT GCGTATTTGG GATTCTATAT TTGGAAACTT GGACTCCCCA
    AGCCGAGAAA TCGTACACAG TCATGATTTT AACAGACATC TGACCCCTTT CCGTGCTGAA
    TGGGATCCAA AGGATCCAAC AGAGTCCCTT GCAGTTATTG GTCGCTACAT AAGTGAAAAT
    TACAATGGAG CTGCCTTGCA TCCGATTGAT TTTATTGACA TTAGCACTGG GCAACTAGTT
    GCTGAAGTTA TGGATCCAAA CATCACCACC ATTAGTCCTG TGAACAAGCT ACATCCACGA
    GATGATATTT TGGCTTCTGG CAGTTCGAGG TCCCTTTTCA TTTGGAGGCC AAAGGAGAAG
    TCTGAACCTG TGGAAAAGAA AGATGAAAGC AAGATTATTA TTTGTGGAGG TGCTATGAAA
    AAGCGTAAAG GCAAGTTTCG TGGTGAAAGT GATGATGATT CTGAAGATGA TGGATGTGTA
    TCCAAGGGCA AGAATTTTCA ATTTAAAAAG GCTGAATCAA AATCAGCTCC CAGACCTCGC
    AAGGTTAACA AATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D