ORF » Species Summary » Populus trichocarpa » POPTR_0003s05610g cDNA ORF clone

POPTR_0003s05610g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0003s05610g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0003s05610g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa07938 XM_002303240.2
Latest version!		 Populus trichocarpa gibberellin 3-beta-hydroxylase family protein (POPTR_0003s05610g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa426199 XM_002303240.3
Latest version!		 Populus trichocarpa gibberellin 3-beta-dioxygenase 1 (LOC7475736), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0003s05610g ( XM_002303240.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002303276.1 Populus trichocarpa gibberellin 3-beta-hydroxylase family protein (POPTR_0003s05610g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa07938
    Clone ID Related Accession (Same CDS sequence) XM_002303240.2
    Accession Version XM_002303240.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1122bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product gibberellin 3-beta-hydroxylase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008469). On Dec 16, 2013 this sequence version replaced XM_002303240.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCATTGAC AGACGCCTTT AGATCCCACC CCGTCCATCT ACACCAAAAG 
    CACCTTGACT TTTCCTCTCT TCAAGAAATA CCTGACTCAC ACAAATGGAC TCAACTTGAT 
    GATATTGAAC AACAACATCC TTCAGTTGAA TCCTTCATCA CGGAATCTGT CCCCGTTATC 
    GATCTCTTAG ACCCTAACGT CCTTCAAAAC ATAGGCAATG CATGCAAAAC TTGGGGTGTG 
    CTTCAAGTCA CAAACCATGG CATCCCTATT AGCCTTCTTG AGAGCGTTGA GGGTGTTAGT 
    AGGAGCCTTT TCTCTTTACC TGTCCAGCAA AAACTCAAAG CAGCTAGATC ACCCGATGGT 
    GTTTCTGGCT ATGGTGTGGC TAGGATTTCT TCATTTTTCT CAAAGCTCAT GTGGTCAGAG 
    GGATTCACCA TAGTTGGTTC TCCACTTGAG CACTTTCGCC AACTTTGGCC CCAAGATTAC 
    ACCAAATTCT GCGATGTAAT TGAAGAACAT GAGAAAGAAA TGCAAAAGCT AGCAAGGAGG 
    TTGACATGGT TAATGCTGGG CTCATTGGGC ATAACCAAGA AAGATTTAAA CTGGGCTGGA 
    CCGAAAGGTG AATCCAAAGA AGGTGGTGCA GCCTTGCAAC TGAACTCCTA CCCGGCTTGC 
    CCAGATCCAG ATCTGGCAAT GGGTCTTGCT GCACACACAG ACTCCACTCT GCTGACCATT 
    CTTTACCAGA ACAACACAAG TGGATTGCAG GTGCTGAAAG AGGGAATTGG GTGGGTCACC 
    GTCCCACCAA TCCCAGGTGG GCTTGTTGTA AATGTAGGCG ACCTACTCCA TATCCTATCA 
    AACGGGTTGT ACCCGAGTGT GCTCCACAGA GCGGTGGTTA ACCGAACCAA ACACAGATTA 
    TCCATAGCGT ACCTCTACGG GCCACCATCA AGTGTTCAAA TATCACCCAT ACAAAAACTT 
    GTAGGCCCAA ATCATCCTCC TCTCTATCGC CCAATCACTT GGAATGAATA CCTTGTCGCT 
    AAAGCTAAGC ATTTCAACAA AGCATTATCA TCGGTTAGGA TTTGTGCTCC TCTAAATGGA 
    CTAGTTGATG TAAACGATCA TAATAGTGTA AAAGTTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002303276.1
    CDS1..1122
    Translation

    Target ORF information:

    RefSeq Version XM_002303240.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa gibberellin 3-beta-hydroxylase family protein (POPTR_0003s05610g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002303240.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCATTGAC AGACGCCTTT AGATCCCACC CCGTCCATCT ACACCAAAAG 
    CACCTTGACT TTTCCTCTCT TCAAGAAATA CCTGACTCAC ACAAATGGAC TCAACTTGAT 
    GATATTGAAC AACAACATCC TTCAGTTGAA TCCTTCATCA CGGAATCTGT CCCCGTTATC 
    GATCTCTTAG ACCCTAACGT CCTTCAAAAC ATAGGCAATG CATGCAAAAC TTGGGGTGTG 
    CTTCAAGTCA CAAACCATGG CATCCCTATT AGCCTTCTTG AGAGCGTTGA GGGTGTTAGT 
    AGGAGCCTTT TCTCTTTACC TGTCCAGCAA AAACTCAAAG CAGCTAGATC ACCCGATGGT 
    GTTTCTGGCT ATGGTGTGGC TAGGATTTCT TCATTTTTCT CAAAGCTCAT GTGGTCAGAG 
    GGATTCACCA TAGTTGGTTC TCCACTTGAG CACTTTCGCC AACTTTGGCC CCAAGATTAC 
    ACCAAATTCT GCGATGTAAT TGAAGAACAT GAGAAAGAAA TGCAAAAGCT AGCAAGGAGG 
    TTGACATGGT TAATGCTGGG CTCATTGGGC ATAACCAAGA AAGATTTAAA CTGGGCTGGA 
    CCGAAAGGTG AATCCAAAGA AGGTGGTGCA GCCTTGCAAC TGAACTCCTA CCCGGCTTGC 
    CCAGATCCAG ATCTGGCAAT GGGTCTTGCT GCACACACAG ACTCCACTCT GCTGACCATT 
    CTTTACCAGA ACAACACAAG TGGATTGCAG GTGCTGAAAG AGGGAATTGG GTGGGTCACC 
    GTCCCACCAA TCCCAGGTGG GCTTGTTGTA AATGTAGGCG ACCTACTCCA TATCCTATCA 
    AACGGGTTGT ACCCGAGTGT GCTCCACAGA GCGGTGGTTA ACCGAACCAA ACACAGATTA 
    TCCATAGCGT ACCTCTACGG GCCACCATCA AGTGTTCAAA TATCACCCAT ACAAAAACTT 
    GTAGGCCCAA ATCATCCTCC TCTCTATCGC CCAATCACTT GGAATGAATA CCTTGTCGCT 
    AAAGCTAAGC ATTTCAACAA AGCATTATCA TCGGTTAGGA TTTGTGCTCC TCTAAATGGA 
    CTAGTTGATG TAAACGATCA TAATAGTGTA AAAGTTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0003s05610g ( XM_002303240.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002303276.1 Populus trichocarpa gibberellin 3-beta-dioxygenase 1 (LOC7475736), mRNA.
    Price & Availability↑
    CloneID OPa426199
    Clone ID Related Accession (Same CDS sequence) XM_002303240.3
    Accession Version XM_002303240.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1122bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product gibberellin 3-beta-dioxygenase 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037287.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002303240.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCATTGAC AGACGCCTTT AGATCCCACC CCGTCCATCT ACACCAAAAG 
    CACCTTGACT TTTCCTCTCT TCAAGAAATA CCTGACTCAC ACAAATGGAC TCAACTTGAT 
    GACATTGAAC AACAACATCC TTCAGTTGAA TCCTTCATCA CGGAATCTGT CCCCGTTATC 
    GATCTCTTAG ACCCTAACGT CCTTCAAAAC ATAGGCAATG CATGCAAAAC TTGGGGTGTG 
    CTTCAAGTCA CAAACCATGG CATCCCTATT AGCCTTCTTG AGAGCGTTGA GGGTGTTAGT 
    AGGAGCCTTT TCTCTTTACC TGTCCAGCAA AAACTCAAAG CAGCTAGATC ACCCGATGGT 
    GTTTCTGGCT ATGGTGTGGC TAGGATTTCT TCATTTTTCT CAAAGCTCAT GTGGTCAGAG 
    GGATTCACCA TAGTTGGTTC TCCACTTGAG CACTTTCGCC AACTTTGGCC CCAAGATTAC 
    ACCAAATTCT GCGATGTAAT TGAAGAACAT GAGAAAGAAA TGCAAAAGCT AGCAAGGAGG 
    TTGACATGGT TAATGCTGGG CTCATTGGGC ATAACCAAGA AAGATTTAAA CTGGGCTGGA 
    CCGAAAGGTG AATCCAAAGA AGGTGGTGCA GCCTTGCAAC TGAACTCCTA CCCGGCTTGC 
    CCAGATCCAG ATCTGGCAAT GGGTCTTGCT GCACACACAG ACTCCACTCT GCTGACCATT 
    CTTTACCAGA ACAACACAAG TGGATTGCAG GTGCTGAAAG AGGGAATTGG GTGGGTCACC 
    GTCCCACCAA TCCCAGGTGG GCTTGTTGTA AATGTAGGCG ACCTACTCCA TATCCTATCA 
    AACGGGTTGT ACCCGAGTGT GCTCCACAGA GCGGTGGTTA ACCGAACCAA ACACAGATTA 
    TCCATAGCGT ACCTCTACGG GCCACCATCA AGTGTTCAAA TATCACCCAT ACAAAAACTT 
    GTAGGCCCAA ATCATCCTCC TCTCTATCGC CCAATCACTT GGAATGAATA CCTTGTCGCT 
    AAAGCTAAGC ATTTCAACAA AGCATTATCA TCGGTTAGGA TTTGTGCTCC TCTAAATGGA 
    CTAGTTGATG TAAACGATCA TAATAGTGTA AAAGTTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002303276.1
    CDS285..1406
    Translation

    Target ORF information:

    RefSeq Version XM_002303240.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa gibberellin 3-beta-dioxygenase 1 (LOC7475736), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002303240.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGCCTTCAA GATCATTGAC AGACGCCTTT AGATCCCACC CCGTCCATCT ACACCAAAAG 
    CACCTTGACT TTTCCTCTCT TCAAGAAATA CCTGACTCAC ACAAATGGAC TCAACTTGAT 
    GACATTGAAC AACAACATCC TTCAGTTGAA TCCTTCATCA CGGAATCTGT CCCCGTTATC 
    GATCTCTTAG ACCCTAACGT CCTTCAAAAC ATAGGCAATG CATGCAAAAC TTGGGGTGTG 
    CTTCAAGTCA CAAACCATGG CATCCCTATT AGCCTTCTTG AGAGCGTTGA GGGTGTTAGT 
    AGGAGCCTTT TCTCTTTACC TGTCCAGCAA AAACTCAAAG CAGCTAGATC ACCCGATGGT 
    GTTTCTGGCT ATGGTGTGGC TAGGATTTCT TCATTTTTCT CAAAGCTCAT GTGGTCAGAG 
    GGATTCACCA TAGTTGGTTC TCCACTTGAG CACTTTCGCC AACTTTGGCC CCAAGATTAC 
    ACCAAATTCT GCGATGTAAT TGAAGAACAT GAGAAAGAAA TGCAAAAGCT AGCAAGGAGG 
    TTGACATGGT TAATGCTGGG CTCATTGGGC ATAACCAAGA AAGATTTAAA CTGGGCTGGA 
    CCGAAAGGTG AATCCAAAGA AGGTGGTGCA GCCTTGCAAC TGAACTCCTA CCCGGCTTGC 
    CCAGATCCAG ATCTGGCAAT GGGTCTTGCT GCACACACAG ACTCCACTCT GCTGACCATT 
    CTTTACCAGA ACAACACAAG TGGATTGCAG GTGCTGAAAG AGGGAATTGG GTGGGTCACC 
    GTCCCACCAA TCCCAGGTGG GCTTGTTGTA AATGTAGGCG ACCTACTCCA TATCCTATCA 
    AACGGGTTGT ACCCGAGTGT GCTCCACAGA GCGGTGGTTA ACCGAACCAA ACACAGATTA 
    TCCATAGCGT ACCTCTACGG GCCACCATCA AGTGTTCAAA TATCACCCAT ACAAAAACTT 
    GTAGGCCCAA ATCATCCTCC TCTCTATCGC CCAATCACTT GGAATGAATA CCTTGTCGCT 
    AAAGCTAAGC ATTTCAACAA AGCATTATCA TCGGTTAGGA TTTGTGCTCC TCTAAATGGA 
    CTAGTTGATG TAAACGATCA TAATAGTGTA AAAGTTGGTT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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