ORF » Species Summary » Populus trichocarpa » LOC7474576 cDNA ORF clone

LOC7474576 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7474576 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7474576 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa05835 XM_002301886.2
Latest version!		 Populus trichocarpa small nuclear ribonucleoprotein D3 (POPTR_0002s01120g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00
OPa05835 XM_024595090.1
Latest version!		 Populus trichocarpa small nuclear ribonucleoprotein SmD3b (LOC7474576), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $69.30
$99.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7474576 ( XM_002301886.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002301922.1 Populus trichocarpa small nuclear ribonucleoprotein D3 (POPTR_0002s01120g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa05835
    Clone ID Related Accession (Same CDS sequence) XM_002301886.2 , XM_024595090.1
    Accession Version XM_002301886.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 399bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product small nuclear ribonucleoprotein D3
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301886.1. 

    1
    61
    121
    181
    241
    301
    361
    ATGAGCAGAA GCTTAGGGAT TCCGGTGAAG CTACTACACG AGGCTTCCGG TCACATAGTG 
    ACGGTGGAGC TGAAGAGCGG AGAGCTTTAT AGAGGAAGCA TGGTAGAGTG CGAGGATAAC 
    TGGAATTGCC AGCTCGAGAG CATCACTTAC ACTGCTAAGG ATGGGAAGGT CTCACAGCTT 
    GAGCATGTTT TCATTCGTGG CAGTAAAGTC AGATTCATGG TCATACCTGA TATGCTAAAG 
    AATGCACCCA TGTTCAAGCG TTTGGATGCT AGAATCAAGG GTAAGAGTGC ATCGCTAGGT 
    GTTGGCAGGG GAAGATCTGT TGCAATGCGG TCCAAAGCTC AAGCTACTGG TCGTGGAGCA 
    GCCCCTGGCA GGGGCGTTGT ACCACCTGTC AGGAGGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301922.1
    CDS63..461
    Translation

    Target ORF information:

    RefSeq Version XM_002301886.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa small nuclear ribonucleoprotein D3 (POPTR_0002s01120g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301886.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    ATGAGCAGAA GCTTAGGGAT TCCGGTGAAG CTACTACACG AGGCTTCCGG TCACATAGTG 
    ACGGTGGAGC TGAAGAGCGG AGAGCTTTAT AGAGGAAGCA TGGTAGAGTG CGAGGATAAC 
    TGGAATTGCC AGCTCGAGAG CATCACTTAC ACTGCTAAGG ATGGGAAGGT CTCACAGCTT 
    GAGCATGTTT TCATTCGTGG CAGTAAAGTC AGATTCATGG TCATACCTGA TATGCTAAAG 
    AATGCACCCA TGTTCAAGCG TTTGGATGCT AGAATCAAGG GTAAGAGTGC ATCGCTAGGT 
    GTTGGCAGGG GAAGATCTGT TGCAATGCGG TCCAAAGCTC AAGCTACTGG TCGTGGAGCA 
    GCCCCTGGCA GGGGCGTTGT ACCACCTGTC AGGAGGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7474576 ( XM_024595090.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024450858.1 Populus trichocarpa small nuclear ribonucleoprotein SmD3b (LOC7474576), mRNA.
    Price & Availability↑
    CloneID OPa05835
    Clone ID Related Accession (Same CDS sequence) XM_002301886.2 , XM_024595090.1
    Accession Version XM_024595090.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 399bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product small nuclear ribonucleoprotein SmD3b
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    ATGAGCAGAA GCTTAGGGAT TCCGGTGAAG CTACTACACG AGGCTTCCGG TCACATAGTG 
    ACGGTGGAGC TGAAGAGCGG AGAGCTTTAT AGAGGAAGCA TGGTAGAGTG CGAGGATAAC 
    TGGAATTGCC AGCTCGAGAG CATCACTTAC ACTGCTAAGG ATGGGAAGGT CTCACAGCTT 
    GAGCATGTTT TCATTCGTGG CAGTAAAGTC AGATTCATGG TCATACCTGA TATGCTAAAG 
    AATGCACCCA TGTTCAAGCG TTTGGATGCT AGAATCAAGG GTAAGAGTGC ATCGCTAGGT 
    GTTGGCAGGG GAAGATCTGT TGCAATGCGG TCCAAAGCTC AAGCTACTGG TCGTGGAGCA 
    GCCCCTGGCA GGGGCGTTGT ACCACCTGTC AGGAGGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024450858.1
    CDS77..475
    Translation

    Target ORF information:

    RefSeq Version XM_024595090.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa small nuclear ribonucleoprotein SmD3b (LOC7474576), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024595090.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    ATGAGCAGAA GCTTAGGGAT TCCGGTGAAG CTACTACACG AGGCTTCCGG TCACATAGTG 
    ACGGTGGAGC TGAAGAGCGG AGAGCTTTAT AGAGGAAGCA TGGTAGAGTG CGAGGATAAC 
    TGGAATTGCC AGCTCGAGAG CATCACTTAC ACTGCTAAGG ATGGGAAGGT CTCACAGCTT 
    GAGCATGTTT TCATTCGTGG CAGTAAAGTC AGATTCATGG TCATACCTGA TATGCTAAAG 
    AATGCACCCA TGTTCAAGCG TTTGGATGCT AGAATCAAGG GTAAGAGTGC ATCGCTAGGT 
    GTTGGCAGGG GAAGATCTGT TGCAATGCGG TCCAAAGCTC AAGCTACTGG TCGTGGAGCA 
    GCCCCTGGCA GGGGCGTTGT ACCACCTGTC AGGAGGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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