ORF » Species Summary » Populus trichocarpa » LOC7473290 cDNA ORF clone

LOC7473290 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7473290 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7473290 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa27781 XM_002318979.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0013s02310g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
OPa441826 XM_024583542.1
Latest version!		 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC7473290), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00
OPa441827 XM_024583543.1
Latest version!		 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC7473290), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7473290 ( XM_002318979.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002319015.2 Populus trichocarpa hypothetical protein (POPTR_0013s02310g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa27781
    Clone ID Related Accession (Same CDS sequence) XM_002318979.2
    Accession Version XM_002318979.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2589bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008479). On Dec 16, 2013 this sequence version replaced XM_002318979.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATTATTGA TGCCATCACT GGTTGTTGTA CAGGGGACTG TAAAAAGAAG 
    ATAAGAGGCA CTGTTGTGCT GATGAAGAAG AATGTTCTGG ACTTAACTGA TTTAAATGCT 
    TCGATTCATG ATCGTGTTCA TGAGTTTTTA GGCCAAGGAG TCTCTCTGCA ACTCGTCAGT 
    GCTGTTAACA GTGACCCTTC AGCGAATGAT TTCAAAGGGA AGCTAGGAAA ACCTGCATAT 
    TTGGAAAAAT GGATCACTAC AGTCACTCCC TTAACAGCAG GCGAGACGGC ATTCAAAGTT 
    ACCTTTAATT GGGATGAGGA GATTGGAATT CCAGGGGCGT TGCTAGTAAA AAATAATCAT 
    CAGAGTGAAT TCTACCTTAA GACTGTCACA CTTGAAGGTG TTCCTGGCCT AGGCCGAGTC 
    CATTTTGTTT GCAAATCGTG GATTTATCCT GCAGAACATT ACAGTAAACC TCGTATTTTC 
    TTCACTAACA AGACGTATCT GCCACACGAG ACACCAGCAC CGCTTCGTAA GTACAGGGAA 
    GAAGAACTGT TTCATTTGAG AGGAAATGGA GAAGGAGAGC TTAAGGAATG GGATCGCGTC 
    TATGACTATG ATTTTTACAA TGATTTGGGA TCTTCTAAGA AGGGTTCAGA GTATTTCCGT 
    CCTGTTCTTG GTGGCTCTTC GGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGCAAA 
    AAAGAAGCAG ATCCCCACAC CGAGAGCAGG CTGCCACTTC TGAAGAGCTT AAGCATATAT 
    GTTCCGAGAG ATGAACGATT TGGTCATCTG AAGTTGGCAG ACTTCCTTGC TTATGCACTG 
    AAAACCGTAG CTCAAGTTGT TAAAAATGGA GTGGATACAT TTGTTGACAC CACCCCTAAT 
    GAGTTTGACT CTTTTGATGA TGTATTGAAA CTCTATGAGG GAGGATATGA GCTGCCTCAT 
    GTTCCTCTAT TAGATAACAT CAGGAAAATC TTTCCCTTGG AGTTTCTTGA GGAAATTTTC 
    CGAACTGATG GGGAACGTTT TTTCGAATTT CCAAAGCCTC AAGTGATTAA AGATAATCAT 
    TCTGCTTGGA GGACTGATGA AGAATTTGGC AGAGAAATGT TGGCTGGAGT AAACCCTGTT 
    CTCATTCGTC GTCTTGAGGA ATTCCCCCCG AAAAGCAAGC TAAATAGAGA ACTATATGGT 
    GACCAAAATA GTAAGATAAC TGAGGAGCAC ATACAGAATA GTCTGGATGG ACTGACCATC 
    GATGAGGCAA TCAGGAACAA CAGGATGTTC ATATTAGATC ATCATGATGC ATTGATGCCA 
    TATCTGAGGA GGATAAACTC TACTTCCACA AAGACTTATG CCACAAGAAC TCTGCTTTTC 
    TTGAAAGATG ATGGAACTTT GAAGCCACTT GCAATTGAGT TAAGCTGGCC TCATGAAGAG 
    GGAGATAAAT ATGGATCCAA CAGCGAAGTC TACACCCCCG CTGAAACTGG TGTTGAAAGT 
    TCCATTTGGC AGCTGGCTAA AGCTTATGTG GGTGTAAACG ACTCCGGCTA TCATCAGCTT 
    ATCAGCCACT GGTTGCATAC TCATGCAGTA ATGGAGCCAT TTGTGATTGC AACAAATAGG 
    CACCTCAGTG TGCTTCATCC GATATATAAA CTTCTGGAAC CTCACTTCCG GGACACAATG 
    AACATAAATG CACTCGCAAG GCAGATCCTC ATCAATGCTG GCGGATTTCT GGAATTGACA 
    GTTTATCCTT CGAAGTATGC CTTGGAAATG TCATCATCAC TTTACAGAAG CTGGGATTTC 
    ACTGAGCAAG CACTTCCTGA GGATTTGAAG AAGAGAGGAG TGGCAGTTGA TGATCCAAAT 
    TCTCCGCATG GTGTTCGTCT CCTGATAAAA GATTACCCAT ATGCCGTCGA CGGACTTGAG 
    ATATGGTCGG CAATCAAAGA ATGGGTCAGA GACTACTGCT CTTTCTACTA CAAGACTGAT 
    GAAATGGTTC AAAACGACAC TGAAATCCAA TCTTGGTGGA AGGAAGTGAG AGAGGTAGGG 
    CATGGTGACC AGAAAGATGC ACCCTGGTGG CCAAAGATGC AGACTCGTGA AGAGCTAATA 
    CAATCATGTA CCATAATCAT ATGGGTGGGA TCTGCTCTTC ATGCAGCTGT CAACTTTGGG 
    CAATACCCTT ATGGAGGCTA CCTTCTGAAT CGTCCAAGCA CAAGCCGTAG GTTCATGCCA 
    CAGAAAGGCT CTCCTGAGTA CGAGGAACTC AAGTCGAACC CTGACAAGTT TTTCTTGGGA 
    ACAATCACTG CCCAGTTGCA AACACTTCTT GGCATTTCCC TCATAGAAAT TCTATCAAGG 
    CATTCCTCAG ACGAGGTGTA TCTTGGGCAG CGAGACATTC TTGAATGGAC AGCAGAGAAA 
    GAACCAATAG AGGCGTTTAA GAAATTTGGA AGGAAACTGG CAGTTATTGA GGACAGGATA 
    TTAGATATGA ACAGAGAAGC GAGATATAAG AATCGTGTTG GGCCAGTCAA GGTGCCATAC 
    ACTTTGCTGG TTCCTACCAG TGAAGCTGGG CTCACTGGAA GGGGAATTCC AAACAGTGTT 
    TCAATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002319015.2
    CDS178..2766
    Translation

    Target ORF information:

    RefSeq Version XM_002318979.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0013s02310g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002318979.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATTATTGA TGCCATCACT GGTTGTTGTA CAGGGGACTG TAAAAAGAAG 
    ATAAGAGGCA CTGTTGTGCT GATGAAGAAG AATGTTCTGG ACTTAACTGA TTTAAATGCT 
    TCGATTCATG ATCGTGTTCA TGAGTTTTTA GGCCAAGGAG TCTCTCTGCA ACTCGTCAGT 
    GCTGTTAACA GTGACCCTTC AGCGAATGAT TTCAAAGGGA AGCTAGGAAA ACCTGCATAT 
    TTGGAAAAAT GGATCACTAC AGTCACTCCC TTAACAGCAG GCGAGACGGC ATTCAAAGTT 
    ACCTTTAATT GGGATGAGGA GATTGGAATT CCAGGGGCGT TGCTAGTAAA AAATAATCAT 
    CAGAGTGAAT TCTACCTTAA GACTGTCACA CTTGAAGGTG TTCCTGGCCT AGGCCGAGTC 
    CATTTTGTTT GCAAATCGTG GATTTATCCT GCAGAACATT ACAGTAAACC TCGTATTTTC 
    TTCACTAACA AGACGTATCT GCCACACGAG ACACCAGCAC CGCTTCGTAA GTACAGGGAA 
    GAAGAACTGT TTCATTTGAG AGGAAATGGA GAAGGAGAGC TTAAGGAATG GGATCGCGTC 
    TATGACTATG ATTTTTACAA TGATTTGGGA TCTTCTAAGA AGGGTTCAGA GTATTTCCGT 
    CCTGTTCTTG GTGGCTCTTC GGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGCAAA 
    AAAGAAGCAG ATCCCCACAC CGAGAGCAGG CTGCCACTTC TGAAGAGCTT AAGCATATAT 
    GTTCCGAGAG ATGAACGATT TGGTCATCTG AAGTTGGCAG ACTTCCTTGC TTATGCACTG 
    AAAACCGTAG CTCAAGTTGT TAAAAATGGA GTGGATACAT TTGTTGACAC CACCCCTAAT 
    GAGTTTGACT CTTTTGATGA TGTATTGAAA CTCTATGAGG GAGGATATGA GCTGCCTCAT 
    GTTCCTCTAT TAGATAACAT CAGGAAAATC TTTCCCTTGG AGTTTCTTGA GGAAATTTTC 
    CGAACTGATG GGGAACGTTT TTTCGAATTT CCAAAGCCTC AAGTGATTAA AGATAATCAT 
    TCTGCTTGGA GGACTGATGA AGAATTTGGC AGAGAAATGT TGGCTGGAGT AAACCCTGTT 
    CTCATTCGTC GTCTTGAGGA ATTCCCCCCG AAAAGCAAGC TAAATAGAGA ACTATATGGT 
    GACCAAAATA GTAAGATAAC TGAGGAGCAC ATACAGAATA GTCTGGATGG ACTGACCATC 
    GATGAGGCAA TCAGGAACAA CAGGATGTTC ATATTAGATC ATCATGATGC ATTGATGCCA 
    TATCTGAGGA GGATAAACTC TACTTCCACA AAGACTTATG CCACAAGAAC TCTGCTTTTC 
    TTGAAAGATG ATGGAACTTT GAAGCCACTT GCAATTGAGT TAAGCTGGCC TCATGAAGAG 
    GGAGATAAAT ATGGATCCAA CAGCGAAGTC TACACCCCCG CTGAAACTGG TGTTGAAAGT 
    TCCATTTGGC AGCTGGCTAA AGCTTATGTG GGTGTAAACG ACTCCGGCTA TCATCAGCTT 
    ATCAGCCACT GGTTGCATAC TCATGCAGTA ATGGAGCCAT TTGTGATTGC AACAAATAGG 
    CACCTCAGTG TGCTTCATCC GATATATAAA CTTCTGGAAC CTCACTTCCG GGACACAATG 
    AACATAAATG CACTCGCAAG GCAGATCCTC ATCAATGCTG GCGGATTTCT GGAATTGACA 
    GTTTATCCTT CGAAGTATGC CTTGGAAATG TCATCATCAC TTTACAGAAG CTGGGATTTC 
    ACTGAGCAAG CACTTCCTGA GGATTTGAAG AAGAGAGGAG TGGCAGTTGA TGATCCAAAT 
    TCTCCGCATG GTGTTCGTCT CCTGATAAAA GATTACCCAT ATGCCGTCGA CGGACTTGAG 
    ATATGGTCGG CAATCAAAGA ATGGGTCAGA GACTACTGCT CTTTCTACTA CAAGACTGAT 
    GAAATGGTTC AAAACGACAC TGAAATCCAA TCTTGGTGGA AGGAAGTGAG AGAGGTAGGG 
    CATGGTGACC AGAAAGATGC ACCCTGGTGG CCAAAGATGC AGACTCGTGA AGAGCTAATA 
    CAATCATGTA CCATAATCAT ATGGGTGGGA TCTGCTCTTC ATGCAGCTGT CAACTTTGGG 
    CAATACCCTT ATGGAGGCTA CCTTCTGAAT CGTCCAAGCA CAAGCCGTAG GTTCATGCCA 
    CAGAAAGGCT CTCCTGAGTA CGAGGAACTC AAGTCGAACC CTGACAAGTT TTTCTTGGGA 
    ACAATCACTG CCCAGTTGCA AACACTTCTT GGCATTTCCC TCATAGAAAT TCTATCAAGG 
    CATTCCTCAG ACGAGGTGTA TCTTGGGCAG CGAGACATTC TTGAATGGAC AGCAGAGAAA 
    GAACCAATAG AGGCGTTTAA GAAATTTGGA AGGAAACTGG CAGTTATTGA GGACAGGATA 
    TTAGATATGA ACAGAGAAGC GAGATATAAG AATCGTGTTG GGCCAGTCAA GGTGCCATAC 
    ACTTTGCTGG TTCCTACCAG TGAAGCTGGG CTCACTGGAA GGGGAATTCC AAACAGTGTT 
    TCAATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7473290 ( XM_024583542.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024439310.1 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC7473290), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa441826
    Clone ID Related Accession (Same CDS sequence) XM_024583542.1
    Accession Version XM_024583542.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2586bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable linoleate 9S-lipoxygenase 5 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATTATTGA TGCCATCACT GATTGTTGTA CAGGGGACTG TAAAAAGAAG 
    ATAAGAGGCA CTGTTGTGCT GATGAAGAAG AATGTTCTGG ACTTAACTGA TTTAAATGCT 
    TCGATTCATG ATCGTGTTCA TGAGTTTTTA GGCCAAGGAG TCTCTCTGCA ACTCGTCAGT 
    GCTGTTAACA GTGACCCTTC AGCGAATGAT TTCAAAGGGA AGCTAGGAAA ACCTGCATAT 
    TTGGAAAAAT GGATCACTAC AGTCACTCCC TTAACAGCAG GCGAGACGGC ATTCAAAGTT 
    ACCTTTAATT GGGATGAGGA GATTGGAATT CCAGGGGCGT TGCTAGTAAA AAATAATCAT 
    CAGAGTGAAT TCTACCTTAA GACTGTCACA CTTGAAGGTG TTCCTGGCCT AGGCCGAGTC 
    CATTTTGTTT GCAAATCGTG GATTTATCCT GCAAAACATT ACAGTAAACC TCGTATTTTT 
    TTCACTAACA AGACATATCT GCCAGACAAG ACACCAGCAC CGCTTCGTAA GTACAGGGAA 
    GAAGAACTGT TTCTTTTGAG AGGAAATGGA GAAGGAGAGC TTAAGGAATG GGATCGCGTC 
    TATGACTATG ATTTTTACAA TGATTTGGGA TCTTCTAAGA AGGGTTCAGA GTATTTCCGT 
    CCTGTTCTTG GTGGCTCTTC GGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGCAAA 
    AAAGAAGATC CCAACACCGA GAGCAGGCTG CCACTTCTGA AGAGCTTAAG CATATATGTT 
    CCGAGAGATG AACGATTTGG TCATCTGAAG TTGGCAGACT TCCTTGCTTA TGCACTGAAA 
    ACCGTAGCTC AAGTTGTTAA AAATGGAGTG GATACATTTG TTGACACCAC CCCTAATGAG 
    TTTGACTCTT TTGATGATGT ATTGAAACTC TATGAGGGAG GATATGAGCT GCCTCATGTT 
    CCTCTATTAG ATAACATCAG GAAAATCTTT CCCTTGGAGT TTCTTGAGGA AATTTTCCGA 
    ACTGATGGGG AACGTTTTTT CGAATTTCCA AAGCCTCAAG TGATTAAAGA TAATCATTCT 
    GCTTGGAGGA CTGATGAAGA ATTTGGCAGA GAAATGTTGG CTGGAGTAAA CCCTGTTCTC 
    ATTCGTCGTC TTGAGGAATT CCCCCCGAAA AGCAAGCTAA ATAGAGAACT ATATGGTGAC 
    CAAAATAGTA AGATAACTGA GGAGCACATA CAGAATAGTC TGGATGGACT GACCATCGAT 
    GAGGCAATCA GGAACAACAG GATGTTCATA TTAGATCATC ATGATGCATT GATGCCATAT 
    CTGAGGAGGA TAAACTCTAC TTCCACAAAG ACTTATGCCA CAAGAACTCT GCTTTTCTTG 
    AAAGATGATG GAACTTTGAA GCCACTTGCA ATTGAGTTAA GCTGGCTTCA TGAAGAGGGA 
    TATAAATATG GATCCAACAG CGAAGTCTAC ACCCCAGCTG AAACTGGTGT TGAAAGTTCC 
    ATTTGGCAGC TGGCTAAAGC TTATGTGGGT GTAAACGACT CCGGCTATCA TCAGCTTATC 
    AGCCACTGGT TGCATACTCA TGCAGTAATG GAGCCATTTG TGATTGCAAC AAATAGGCAC 
    CTCAGTGTGC TTCATCCGAT ATATAAACTT CTGGAACCTC ACTTCCGGGA CACAATGAAC 
    ATAAATGCAC TCGCAAGGCA GATCCTCATC AATGCTGGCG GATTTCTGGA ATTGACAGTT 
    TATCCTTCGA AGTATGCCTT GGAAATGTCA TCATCACTTT ACAGAAGCTG GGATTTCACT 
    GAGCAAGCAC TTCCTGAGGA TTTGAAGAAG AGAGGAGTGG CAGTTGATGA TCCAAATTCT 
    CCGCATGGTG TTCGTCTCCT GATAAAAGAT TACCCATATG CCGTCGACGG ACTTGAGATA 
    TGGTCGGCAA TCAAAGAATG GGTCAGAGAC TACTGCTCTT TCTACTACAA GACTGATGAA 
    ATGGTTCAAA ACGACACTGA AATCCAATCT TGGTGGAAGG AAGTGAGAGA GGTAGGGCAT 
    GGTGACCAGA AAGATGCACC CTGGTGGCCA AAGATGCAGA CTCGTGAAGA GCTAATAGAA 
    TCATGTACCA TAATCATATG GGTGGGATCT GCTCTTCATG CAGCTGTCAA CTTTGGGCAA 
    TACCCTTATG GAGGCTACCT TCTGAATCGT CCAAGCACAA GCCGTCGGTT CATGCCACAG 
    AAAGGCTCTC CTGAGTACGA GGAACTCAAG TCGAACCCTG ACAAGTTTTT CTTGGGAACA 
    ATCACTGCCC AGTTGCAAAC ACTTCTTGGC ATTTCCCTCA TAGAAATTCT ATCAAGGCAT 
    TCCTCAGACG AGGTGTATCT TGGGCAGCGA GACATTCTTG AATGGACAGC AGAGAAAGAA 
    CCAATAGAGG CGTTTAAGAA ATTTGGAAGG AAACTGGCAG TTATTGAGGA CAGGATATTA 
    GATATGAACA GAGAAGCGAG ATATAAGAAT CGTGTTGGGC CAGTCAAGGT GCCATACACT 
    TTGCTGGTTC CTACCAGTGG AGCTGGGCTC ACTGGAAGGG GAATTCCAAA CAGTGTTTCA 
    ATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024439310.1
    CDS521..3106
    Translation

    Target ORF information:

    RefSeq Version XM_024583542.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC7473290), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024583542.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGTTTCAGA ACATTATTGA TGCCATCACT GATTGTTGTA CAGGGGACTG TAAAAAGAAG 
    ATAAGAGGCA CTGTTGTGCT GATGAAGAAG AATGTTCTGG ACTTAACTGA TTTAAATGCT 
    TCGATTCATG ATCGTGTTCA TGAGTTTTTA GGCCAAGGAG TCTCTCTGCA ACTCGTCAGT 
    GCTGTTAACA GTGACCCTTC AGCGAATGAT TTCAAAGGGA AGCTAGGAAA ACCTGCATAT 
    TTGGAAAAAT GGATCACTAC AGTCACTCCC TTAACAGCAG GCGAGACGGC ATTCAAAGTT 
    ACCTTTAATT GGGATGAGGA GATTGGAATT CCAGGGGCGT TGCTAGTAAA AAATAATCAT 
    CAGAGTGAAT TCTACCTTAA GACTGTCACA CTTGAAGGTG TTCCTGGCCT AGGCCGAGTC 
    CATTTTGTTT GCAAATCGTG GATTTATCCT GCAAAACATT ACAGTAAACC TCGTATTTTT 
    TTCACTAACA AGACATATCT GCCAGACAAG ACACCAGCAC CGCTTCGTAA GTACAGGGAA 
    GAAGAACTGT TTCTTTTGAG AGGAAATGGA GAAGGAGAGC TTAAGGAATG GGATCGCGTC 
    TATGACTATG ATTTTTACAA TGATTTGGGA TCTTCTAAGA AGGGTTCAGA GTATTTCCGT 
    CCTGTTCTTG GTGGCTCTTC GGAGTACCCT TATCCTCGTA GGGGAAGAAC AGGCCGCAAA 
    AAAGAAGATC CCAACACCGA GAGCAGGCTG CCACTTCTGA AGAGCTTAAG CATATATGTT 
    CCGAGAGATG AACGATTTGG TCATCTGAAG TTGGCAGACT TCCTTGCTTA TGCACTGAAA 
    ACCGTAGCTC AAGTTGTTAA AAATGGAGTG GATACATTTG TTGACACCAC CCCTAATGAG 
    TTTGACTCTT TTGATGATGT ATTGAAACTC TATGAGGGAG GATATGAGCT GCCTCATGTT 
    CCTCTATTAG ATAACATCAG GAAAATCTTT CCCTTGGAGT TTCTTGAGGA AATTTTCCGA 
    ACTGATGGGG AACGTTTTTT CGAATTTCCA AAGCCTCAAG TGATTAAAGA TAATCATTCT 
    GCTTGGAGGA CTGATGAAGA ATTTGGCAGA GAAATGTTGG CTGGAGTAAA CCCTGTTCTC 
    ATTCGTCGTC TTGAGGAATT CCCCCCGAAA AGCAAGCTAA ATAGAGAACT ATATGGTGAC 
    CAAAATAGTA AGATAACTGA GGAGCACATA CAGAATAGTC TGGATGGACT GACCATCGAT 
    GAGGCAATCA GGAACAACAG GATGTTCATA TTAGATCATC ATGATGCATT GATGCCATAT 
    CTGAGGAGGA TAAACTCTAC TTCCACAAAG ACTTATGCCA CAAGAACTCT GCTTTTCTTG 
    AAAGATGATG GAACTTTGAA GCCACTTGCA ATTGAGTTAA GCTGGCTTCA TGAAGAGGGA 
    TATAAATATG GATCCAACAG CGAAGTCTAC ACCCCAGCTG AAACTGGTGT TGAAAGTTCC 
    ATTTGGCAGC TGGCTAAAGC TTATGTGGGT GTAAACGACT CCGGCTATCA TCAGCTTATC 
    AGCCACTGGT TGCATACTCA TGCAGTAATG GAGCCATTTG TGATTGCAAC AAATAGGCAC 
    CTCAGTGTGC TTCATCCGAT ATATAAACTT CTGGAACCTC ACTTCCGGGA CACAATGAAC 
    ATAAATGCAC TCGCAAGGCA GATCCTCATC AATGCTGGCG GATTTCTGGA ATTGACAGTT 
    TATCCTTCGA AGTATGCCTT GGAAATGTCA TCATCACTTT ACAGAAGCTG GGATTTCACT 
    GAGCAAGCAC TTCCTGAGGA TTTGAAGAAG AGAGGAGTGG CAGTTGATGA TCCAAATTCT 
    CCGCATGGTG TTCGTCTCCT GATAAAAGAT TACCCATATG CCGTCGACGG ACTTGAGATA 
    TGGTCGGCAA TCAAAGAATG GGTCAGAGAC TACTGCTCTT TCTACTACAA GACTGATGAA 
    ATGGTTCAAA ACGACACTGA AATCCAATCT TGGTGGAAGG AAGTGAGAGA GGTAGGGCAT 
    GGTGACCAGA AAGATGCACC CTGGTGGCCA AAGATGCAGA CTCGTGAAGA GCTAATAGAA 
    TCATGTACCA TAATCATATG GGTGGGATCT GCTCTTCATG CAGCTGTCAA CTTTGGGCAA 
    TACCCTTATG GAGGCTACCT TCTGAATCGT CCAAGCACAA GCCGTCGGTT CATGCCACAG 
    AAAGGCTCTC CTGAGTACGA GGAACTCAAG TCGAACCCTG ACAAGTTTTT CTTGGGAACA 
    ATCACTGCCC AGTTGCAAAC ACTTCTTGGC ATTTCCCTCA TAGAAATTCT ATCAAGGCAT 
    TCCTCAGACG AGGTGTATCT TGGGCAGCGA GACATTCTTG AATGGACAGC AGAGAAAGAA 
    CCAATAGAGG CGTTTAAGAA ATTTGGAAGG AAACTGGCAG TTATTGAGGA CAGGATATTA 
    GATATGAACA GAGAAGCGAG ATATAAGAAT CGTGTTGGGC CAGTCAAGGT GCCATACACT 
    TTGCTGGTTC CTACCAGTGG AGCTGGGCTC ACTGGAAGGG GAATTCCAAA CAGTGTTTCA 
    ATCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7473290 ( XM_024583543.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024439311.1 Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC7473290), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa441827
    Clone ID Related Accession (Same CDS sequence) XM_024583543.1
    Accession Version XM_024583543.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2544bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable linoleate 9S-lipoxygenase 5 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037297.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTTTCAGA ACATTATTGA TGCCATCACT GATTGTTGTA CAGGGGACTG TAAAAAGAAG 
    ATAAGAGGCA CTGTTGTGCT GATTCATGAT CGTGTTCATG AGTTTTTAGG CCAAGGAGTC 
    TCTCTGCAAC TCGTCAGTGC TGTTAACAGT GACCCTTCAG CGAATGATTT CAAAGGGAAG 
    CTAGGAAAAC CTGCATATTT GGAAAAATGG ATCACTACAG TCACTCCCTT AACAGCAGGC 
    GAGACGGCAT TCAAAGTTAC CTTTAATTGG GATGAGGAGA TTGGAATTCC AGGGGCGTTG 
    CTAGTAAAAA ATAATCATCA GAGTGAATTC TACCTTAAGA CTGTCACACT TGAAGGTGTT 
    CCTGGCCTAG GCCGAGTCCA TTTTGTTTGC AAATCGTGGA TTTATCCTGC AAAACATTAC 
    AGTAAACCTC GTATTTTTTT CACTAACAAG ACATATCTGC CAGACAAGAC ACCAGCACCG 
    CTTCGTAAGT ACAGGGAAGA AGAACTGTTT CTTTTGAGAG GAAATGGAGA AGGAGAGCTT 
    AAGGAATGGG ATCGCGTCTA TGACTATGAT TTTTACAATG ATTTGGGATC TTCTAAGAAG 
    GGTTCAGAGT ATTTCCGTCC TGTTCTTGGT GGCTCTTCGG AGTACCCTTA TCCTCGTAGG 
    GGAAGAACAG GCCGCAAAAA AGAAGATCCC AACACCGAGA GCAGGCTGCC ACTTCTGAAG 
    AGCTTAAGCA TATATGTTCC GAGAGATGAA CGATTTGGTC ATCTGAAGTT GGCAGACTTC 
    CTTGCTTATG CACTGAAAAC CGTAGCTCAA GTTGTTAAAA ATGGAGTGGA TACATTTGTT 
    GACACCACCC CTAATGAGTT TGACTCTTTT GATGATGTAT TGAAACTCTA TGAGGGAGGA 
    TATGAGCTGC CTCATGTTCC TCTATTAGAT AACATCAGGA AAATCTTTCC CTTGGAGTTT 
    CTTGAGGAAA TTTTCCGAAC TGATGGGGAA CGTTTTTTCG AATTTCCAAA GCCTCAAGTG 
    ATTAAAGATA ATCATTCTGC TTGGAGGACT GATGAAGAAT TTGGCAGAGA AATGTTGGCT 
    GGAGTAAACC CTGTTCTCAT TCGTCGTCTT GAGGAATTCC CCCCGAAAAG CAAGCTAAAT 
    AGAGAACTAT ATGGTGACCA AAATAGTAAG ATAACTGAGG AGCACATACA GAATAGTCTG 
    GATGGACTGA CCATCGATGA GGCAATCAGG AACAACAGGA TGTTCATATT AGATCATCAT 
    GATGCATTGA TGCCATATCT GAGGAGGATA AACTCTACTT CCACAAAGAC TTATGCCACA 
    AGAACTCTGC TTTTCTTGAA AGATGATGGA ACTTTGAAGC CACTTGCAAT TGAGTTAAGC 
    TGGCTTCATG AAGAGGGATA TAAATATGGA TCCAACAGCG AAGTCTACAC CCCAGCTGAA 
    ACTGGTGTTG AAAGTTCCAT TTGGCAGCTG GCTAAAGCTT ATGTGGGTGT AAACGACTCC 
    GGCTATCATC AGCTTATCAG CCACTGGTTG CATACTCATG CAGTAATGGA GCCATTTGTG 
    ATTGCAACAA ATAGGCACCT CAGTGTGCTT CATCCGATAT ATAAACTTCT GGAACCTCAC 
    TTCCGGGACA CAATGAACAT AAATGCACTC GCAAGGCAGA TCCTCATCAA TGCTGGCGGA 
    TTTCTGGAAT TGACAGTTTA TCCTTCGAAG TATGCCTTGG AAATGTCATC ATCACTTTAC 
    AGAAGCTGGG ATTTCACTGA GCAAGCACTT CCTGAGGATT TGAAGAAGAG AGGAGTGGCA 
    GTTGATGATC CAAATTCTCC GCATGGTGTT CGTCTCCTGA TAAAAGATTA CCCATATGCC 
    GTCGACGGAC TTGAGATATG GTCGGCAATC AAAGAATGGG TCAGAGACTA CTGCTCTTTC 
    TACTACAAGA CTGATGAAAT GGTTCAAAAC GACACTGAAA TCCAATCTTG GTGGAAGGAA 
    GTGAGAGAGG TAGGGCATGG TGACCAGAAA GATGCACCCT GGTGGCCAAA GATGCAGACT 
    CGTGAAGAGC TAATAGAATC ATGTACCATA ATCATATGGG TGGGATCTGC TCTTCATGCA 
    GCTGTCAACT TTGGGCAATA CCCTTATGGA GGCTACCTTC TGAATCGTCC AAGCACAAGC 
    CGTCGGTTCA TGCCACAGAA AGGCTCTCCT GAGTACGAGG AACTCAAGTC GAACCCTGAC 
    AAGTTTTTCT TGGGAACAAT CACTGCCCAG TTGCAAACAC TTCTTGGCAT TTCCCTCATA 
    GAAATTCTAT CAAGGCATTC CTCAGACGAG GTGTATCTTG GGCAGCGAGA CATTCTTGAA 
    TGGACAGCAG AGAAAGAACC AATAGAGGCG TTTAAGAAAT TTGGAAGGAA ACTGGCAGTT 
    ATTGAGGACA GGATATTAGA TATGAACAGA GAAGCGAGAT ATAAGAATCG TGTTGGGCCA 
    GTCAAGGTGC CATACACTTT GCTGGTTCCT ACCAGTGGAG CTGGGCTCAC TGGAAGGGGA 
    ATTCCAAACA GTGTTTCAAT CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024439311.1
    CDS522..3065
    Translation

    Target ORF information:

    RefSeq Version XM_024583543.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable linoleate 9S-lipoxygenase 5 (LOC7473290), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024583543.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    ATGTTTCAGA ACATTATTGA TGCCATCACT GATTGTTGTA CAGGGGACTG TAAAAAGAAG 
    ATAAGAGGCA CTGTTGTGCT GATTCATGAT CGTGTTCATG AGTTTTTAGG CCAAGGAGTC 
    TCTCTGCAAC TCGTCAGTGC TGTTAACAGT GACCCTTCAG CGAATGATTT CAAAGGGAAG 
    CTAGGAAAAC CTGCATATTT GGAAAAATGG ATCACTACAG TCACTCCCTT AACAGCAGGC 
    GAGACGGCAT TCAAAGTTAC CTTTAATTGG GATGAGGAGA TTGGAATTCC AGGGGCGTTG 
    CTAGTAAAAA ATAATCATCA GAGTGAATTC TACCTTAAGA CTGTCACACT TGAAGGTGTT 
    CCTGGCCTAG GCCGAGTCCA TTTTGTTTGC AAATCGTGGA TTTATCCTGC AAAACATTAC 
    AGTAAACCTC GTATTTTTTT CACTAACAAG ACATATCTGC CAGACAAGAC ACCAGCACCG 
    CTTCGTAAGT ACAGGGAAGA AGAACTGTTT CTTTTGAGAG GAAATGGAGA AGGAGAGCTT 
    AAGGAATGGG ATCGCGTCTA TGACTATGAT TTTTACAATG ATTTGGGATC TTCTAAGAAG 
    GGTTCAGAGT ATTTCCGTCC TGTTCTTGGT GGCTCTTCGG AGTACCCTTA TCCTCGTAGG 
    GGAAGAACAG GCCGCAAAAA AGAAGATCCC AACACCGAGA GCAGGCTGCC ACTTCTGAAG 
    AGCTTAAGCA TATATGTTCC GAGAGATGAA CGATTTGGTC ATCTGAAGTT GGCAGACTTC 
    CTTGCTTATG CACTGAAAAC CGTAGCTCAA GTTGTTAAAA ATGGAGTGGA TACATTTGTT 
    GACACCACCC CTAATGAGTT TGACTCTTTT GATGATGTAT TGAAACTCTA TGAGGGAGGA 
    TATGAGCTGC CTCATGTTCC TCTATTAGAT AACATCAGGA AAATCTTTCC CTTGGAGTTT 
    CTTGAGGAAA TTTTCCGAAC TGATGGGGAA CGTTTTTTCG AATTTCCAAA GCCTCAAGTG 
    ATTAAAGATA ATCATTCTGC TTGGAGGACT GATGAAGAAT TTGGCAGAGA AATGTTGGCT 
    GGAGTAAACC CTGTTCTCAT TCGTCGTCTT GAGGAATTCC CCCCGAAAAG CAAGCTAAAT 
    AGAGAACTAT ATGGTGACCA AAATAGTAAG ATAACTGAGG AGCACATACA GAATAGTCTG 
    GATGGACTGA CCATCGATGA GGCAATCAGG AACAACAGGA TGTTCATATT AGATCATCAT 
    GATGCATTGA TGCCATATCT GAGGAGGATA AACTCTACTT CCACAAAGAC TTATGCCACA 
    AGAACTCTGC TTTTCTTGAA AGATGATGGA ACTTTGAAGC CACTTGCAAT TGAGTTAAGC 
    TGGCTTCATG AAGAGGGATA TAAATATGGA TCCAACAGCG AAGTCTACAC CCCAGCTGAA 
    ACTGGTGTTG AAAGTTCCAT TTGGCAGCTG GCTAAAGCTT ATGTGGGTGT AAACGACTCC 
    GGCTATCATC AGCTTATCAG CCACTGGTTG CATACTCATG CAGTAATGGA GCCATTTGTG 
    ATTGCAACAA ATAGGCACCT CAGTGTGCTT CATCCGATAT ATAAACTTCT GGAACCTCAC 
    TTCCGGGACA CAATGAACAT AAATGCACTC GCAAGGCAGA TCCTCATCAA TGCTGGCGGA 
    TTTCTGGAAT TGACAGTTTA TCCTTCGAAG TATGCCTTGG AAATGTCATC ATCACTTTAC 
    AGAAGCTGGG ATTTCACTGA GCAAGCACTT CCTGAGGATT TGAAGAAGAG AGGAGTGGCA 
    GTTGATGATC CAAATTCTCC GCATGGTGTT CGTCTCCTGA TAAAAGATTA CCCATATGCC 
    GTCGACGGAC TTGAGATATG GTCGGCAATC AAAGAATGGG TCAGAGACTA CTGCTCTTTC 
    TACTACAAGA CTGATGAAAT GGTTCAAAAC GACACTGAAA TCCAATCTTG GTGGAAGGAA 
    GTGAGAGAGG TAGGGCATGG TGACCAGAAA GATGCACCCT GGTGGCCAAA GATGCAGACT 
    CGTGAAGAGC TAATAGAATC ATGTACCATA ATCATATGGG TGGGATCTGC TCTTCATGCA 
    GCTGTCAACT TTGGGCAATA CCCTTATGGA GGCTACCTTC TGAATCGTCC AAGCACAAGC 
    CGTCGGTTCA TGCCACAGAA AGGCTCTCCT GAGTACGAGG AACTCAAGTC GAACCCTGAC 
    AAGTTTTTCT TGGGAACAAT CACTGCCCAG TTGCAAACAC TTCTTGGCAT TTCCCTCATA 
    GAAATTCTAT CAAGGCATTC CTCAGACGAG GTGTATCTTG GGCAGCGAGA CATTCTTGAA 
    TGGACAGCAG AGAAAGAACC AATAGAGGCG TTTAAGAAAT TTGGAAGGAA ACTGGCAGTT 
    ATTGAGGACA GGATATTAGA TATGAACAGA GAAGCGAGAT ATAAGAATCG TGTTGGGCCA 
    GTCAAGGTGC CATACACTTT GCTGGTTCCT ACCAGTGGAG CTGGGCTCAC TGGAAGGGGA 
    ATTCCAAACA GTGTTTCAAT CTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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