ORF » Species Summary » Populus trichocarpa » POPTR_0001s09850g cDNA ORF clone

POPTR_0001s09850g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s09850g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s09850g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa01016 XM_002297977.2
Latest version!		 Populus trichocarpa 1-aminocyclopropane-1-carboxylate synthase family protein (POPTR_0001s09850g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa420055 XM_002297977.3
Latest version!		 Populus trichocarpa 1-aminocyclopropane-1-carboxylate synthase (LOC7472745), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s09850g ( XM_002297977.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298013.1 Populus trichocarpa 1-aminocyclopropane-1-carboxylate synthase family protein (POPTR_0001s09850g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa01016
    Clone ID Related Accession (Same CDS sequence) XM_002297977.2
    Accession Version XM_002297977.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1446bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product 1-aminocyclopropane-1-carboxylate synthase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002297977.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTTTCA AGTTGAATAG CCACTTGCTG TCTAGGATAG CAAGCAGCAA TGGACACGGT 
    GAAGATTCCC CATATTTCGA TGGCTGGAAA GCCTATGACA CTGATCCCCA TCATCCCACG 
    GACAATCCAA ATGGAGTTAT CCAGATGGGT CTTGCAGAGA ATCAGCTGTG CTTTGATTTG 
    ATTCAAGACT GGCTCAAGAA GAATCCTAAA GCCTCCATTT GCAGTCCTGA AGGATTAAAT 
    GAGTTCAGAG AGATAGCCAT CTTTCAAGAC TATCATGGCT TGCCAGAATT TAGAAATGCT 
    GTAGCAAACT TCATGGAAAA AGTGAGGGGA AATAGGGTTG CATTTGATCC TGACCGCATT 
    GTTATGAGTG GAGGAGCTAC CGGAGCTCAT GAAACAATTG CGTTTTGCTT GGCGGATCCC 
    GGCGAGGCAT TTTTGGTTCC TACTCCTTAT TATCCAGGAT TTGATCGAGA TTTGAGATGG 
    AGAACAGGAG TTAAACTCAT TCCAGTTGAC TCTGATAGCT CTAACAACTT CATGGTTACA 
    AAAGAAGCCT TGGAAAATGC CTATGAGATG GCACAATTAG ACAACATTAA AGTAAAGGGC 
    TTGCTCATAA CAAACCCATC CAATCCGTTG GGTACCATCC TAGACAGGGA AACTCTACGA 
    AGCATTGTGA GATTCATCAA TGAAAAGAAC ATCCATTTAG TCTGTGATGA GATTTATGCA 
    GCCACAGTTT TCAGCCAGCC TGATTTCATT AGCGTAGCGG AGATACTACA GGAAGATATT 
    GAATGCAATC TTGATCTTGT ACACATTGTT TACAGTCTCT CAAAGGACAT GGGCTTCCCT 
    GGCCTCAGGG TTGGCATTAT CTATTCTTAC AATGATGCAG TTGTGAGTTG CGCCCGCAAG 
    ATGTCAAGCT TCGGATTGGT ATCCACACAA ACTCAGTACC TGATAGCATC AATGCTATCG 
    GATAATGAAT TTGTGGAGAT GTTCATTAGG GAAAGCAAAA GTAGATTAGC CGCAAGGTAT 
    AGAGTCTTCA CTCGTGGACT TGATCAAGTA GGCATTGAGT GTTTGAAGAC AAGTAATGCT 
    GGCCTGTTTT TGTGGATGGA TTTGAGTAGA CTCCTCAAAG AGCAGACATT TGAAGCTGAA 
    ATGGAACTAT GGCGAGTTAT AATCCATGAA GTCAAGCTCA ACGTTTCGCC GGGTTGCTCT 
    TTTCATTGCT TGAAGCCAGG GTGGTTTAGG GTTTGTTTTG CCAACATGGA TGACGAGACC 
    ATGCAAGTAG CTTTGTCAAG AATTAAAACA TTTGTCAATA AAGAGGCGGG CACCAAGAAG 
    TCTAAGAAGA ACTTGCGCTG GCAAGGCAGT CTTAAACTGC TCAACTCTCC TCGAATATAC 
    GATGATTTCA TCAATTCTCC ACACTCTCCT ATACCTCAAT CACCTCTTGT TCGAGCAAGG 
    AATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298013.1
    CDS1..1446
    Translation

    Target ORF information:

    RefSeq Version XM_002297977.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa 1-aminocyclopropane-1-carboxylate synthase family protein (POPTR_0001s09850g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002297977.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTTTCA AGTTGAATAG CCACTTGCTG TCTAGGATAG CAAGCAGCAA TGGACACGGT 
    GAAGATTCCC CATATTTCGA TGGCTGGAAA GCCTATGACA CTGATCCCCA TCATCCCACG 
    GACAATCCAA ATGGAGTTAT CCAGATGGGT CTTGCAGAGA ATCAGCTGTG CTTTGATTTG 
    ATTCAAGACT GGCTCAAGAA GAATCCTAAA GCCTCCATTT GCAGTCCTGA AGGATTAAAT 
    GAGTTCAGAG AGATAGCCAT CTTTCAAGAC TATCATGGCT TGCCAGAATT TAGAAATGCT 
    GTAGCAAACT TCATGGAAAA AGTGAGGGGA AATAGGGTTG CATTTGATCC TGACCGCATT 
    GTTATGAGTG GAGGAGCTAC CGGAGCTCAT GAAACAATTG CGTTTTGCTT GGCGGATCCC 
    GGCGAGGCAT TTTTGGTTCC TACTCCTTAT TATCCAGGAT TTGATCGAGA TTTGAGATGG 
    AGAACAGGAG TTAAACTCAT TCCAGTTGAC TCTGATAGCT CTAACAACTT CATGGTTACA 
    AAAGAAGCCT TGGAAAATGC CTATGAGATG GCACAATTAG ACAACATTAA AGTAAAGGGC 
    TTGCTCATAA CAAACCCATC CAATCCGTTG GGTACCATCC TAGACAGGGA AACTCTACGA 
    AGCATTGTGA GATTCATCAA TGAAAAGAAC ATCCATTTAG TCTGTGATGA GATTTATGCA 
    GCCACAGTTT TCAGCCAGCC TGATTTCATT AGCGTAGCGG AGATACTACA GGAAGATATT 
    GAATGCAATC TTGATCTTGT ACACATTGTT TACAGTCTCT CAAAGGACAT GGGCTTCCCT 
    GGCCTCAGGG TTGGCATTAT CTATTCTTAC AATGATGCAG TTGTGAGTTG CGCCCGCAAG 
    ATGTCAAGCT TCGGATTGGT ATCCACACAA ACTCAGTACC TGATAGCATC AATGCTATCG 
    GATAATGAAT TTGTGGAGAT GTTCATTAGG GAAAGCAAAA GTAGATTAGC CGCAAGGTAT 
    AGAGTCTTCA CTCGTGGACT TGATCAAGTA GGCATTGAGT GTTTGAAGAC AAGTAATGCT 
    GGCCTGTTTT TGTGGATGGA TTTGAGTAGA CTCCTCAAAG AGCAGACATT TGAAGCTGAA 
    ATGGAACTAT GGCGAGTTAT AATCCATGAA GTCAAGCTCA ACGTTTCGCC GGGTTGCTCT 
    TTTCATTGCT TGAAGCCAGG GTGGTTTAGG GTTTGTTTTG CCAACATGGA TGACGAGACC 
    ATGCAAGTAG CTTTGTCAAG AATTAAAACA TTTGTCAATA AAGAGGCGGG CACCAAGAAG 
    TCTAAGAAGA ACTTGCGCTG GCAAGGCAGT CTTAAACTGC TCAACTCTCC TCGAATATAC 
    GATGATTTCA TCAATTCTCC ACACTCTCCT ATACCTCAAT CACCTCTTGT TCGAGCAAGG 
    AATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s09850g ( XM_002297977.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002298013.2 Populus trichocarpa 1-aminocyclopropane-1-carboxylate synthase (LOC7472745), mRNA.
    Price & Availability↑
    CloneID OPa420055
    Clone ID Related Accession (Same CDS sequence) XM_002297977.3
    Accession Version XM_002297977.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1446bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 1-aminocyclopropane-1-carboxylate synthase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002297977.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTTTCA AGTTGAATAG CCACTTGCTG TCTAGGATAG CAAGCAGCAA TGGACACGGT 
    GAAGATTCCC CATATTTCGA TGGCTGGAAA GCCTATGACA CTGATCCCCA TCATCCCACG 
    GACAATCCAA ATGGAGTTAT CCAGATGGGT CTTGCAGAGA ATCAGCTGTG CTTTGATTTG 
    ATTCAAGACT GGCTCAAGAA GAATCCAAAA GCCTCCATTT GCAGTCCTGA AGGATTAAAT 
    GAGTTCAGAG AGATAGCCAT CTTTCAAGAC TATCATGGCT TGCCAGAATT TAGAAATGCT 
    GTAGCAAACT TCATGGAAAA AGTGAGGGGA AATAGGGTTA CATTTGATCC TGACCGCATT 
    GTTATGAGTG GAGGAGCTAC CGGAGCTCAT GAAACAATTG CGTTTTGCTT GGCGGATCCC 
    GGCGAGGCAT TTTTGGTTCC TACTCCTTAT TATCCAGGAT TTGATCGAGA TTTGAGATGG 
    AGAACAGGAG TTAAACTCAT TCCAGTTGAC TCTGATAGCT CTAACAACTT CATGGTTACA 
    AAAGAAGCCT TGGAAAATGC CTATGAGATG GCACAATTAG ACAACATTAA AGTAAAGGGC 
    TTGCTCATAA CAAACCCATC CAATCCGTTG GGTACCATCC TAGACAGGGA AACTCTACGA 
    AGCATTGTGA GATTCATCAA TGAAAAGAAC ATCCATTTAG TCTGTGATGA GATTTATGCA 
    GCCACAGTTT TCAGCCAGCC TGATTTCATT AGCGTAGCGG AGATACTACA GGAAGATATT 
    GAATGCAATC TTGATCTTGT ACACATTGTT TACAGTCTCT CAAAGGACAT GGGCTTCCCT 
    GGCCTCAGGG TTGGCATTAT CTATTCTTAC AATGATGCAG TTGTGAGTTG CGCCCGCAAG 
    ATGTCAAGCT TCGGATTGGT ATCCACACAA ACTCAGTACC TGATAGCATC AATGCTATCG 
    GATAATGAAT TTGTGGAGAT GTTCATTAGG GAAAGCAAAA GTAGATTAGC CGCAAGGTAT 
    AGAGTCTTCA CTCGTGGACT TGATCAAGTA GGCATTGAGT GTTTGAAGAC AAGTAATGCT 
    GGCCTGTTTT TGTGGATGGA TTTGAGTAGA CTCCTCAAAG AGCAGACATT TGAAGCTGAA 
    ATGGAACTAT GGCGAGTTAT AATCCATGAA GTCAAGCTCA ACGTTTCGCC GGGTTGCTCT 
    TTTCATTGCT TGAAGCCAGG GTGGTTTAGG GTTTGTTTTG CCAACATGGA TGACGAGACC 
    ATGCAAGTAG CTTTGTCAAG AATTAAAACA TTTGTCAATA AAGAGGCGGG CACCAAGAAG 
    TCTAAGAAGA ACTTGCGCTG GCAAGGCAGT CTTAAACTGC TCAACTCTCC TCGAATATAC 
    GATGATTTCA TCAATTCTCC ACACTCTCCT ATACCTCAAT CACCTCTTGT TCGAGCAAGG 
    AATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002298013.2
    CDS222..1667
    Translation

    Target ORF information:

    RefSeq Version XM_002297977.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 1-aminocyclopropane-1-carboxylate synthase (LOC7472745), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002297977.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGTTTTCA AGTTGAATAG CCACTTGCTG TCTAGGATAG CAAGCAGCAA TGGACACGGT 
    GAAGATTCCC CATATTTCGA TGGCTGGAAA GCCTATGACA CTGATCCCCA TCATCCCACG 
    GACAATCCAA ATGGAGTTAT CCAGATGGGT CTTGCAGAGA ATCAGCTGTG CTTTGATTTG 
    ATTCAAGACT GGCTCAAGAA GAATCCAAAA GCCTCCATTT GCAGTCCTGA AGGATTAAAT 
    GAGTTCAGAG AGATAGCCAT CTTTCAAGAC TATCATGGCT TGCCAGAATT TAGAAATGCT 
    GTAGCAAACT TCATGGAAAA AGTGAGGGGA AATAGGGTTA CATTTGATCC TGACCGCATT 
    GTTATGAGTG GAGGAGCTAC CGGAGCTCAT GAAACAATTG CGTTTTGCTT GGCGGATCCC 
    GGCGAGGCAT TTTTGGTTCC TACTCCTTAT TATCCAGGAT TTGATCGAGA TTTGAGATGG 
    AGAACAGGAG TTAAACTCAT TCCAGTTGAC TCTGATAGCT CTAACAACTT CATGGTTACA 
    AAAGAAGCCT TGGAAAATGC CTATGAGATG GCACAATTAG ACAACATTAA AGTAAAGGGC 
    TTGCTCATAA CAAACCCATC CAATCCGTTG GGTACCATCC TAGACAGGGA AACTCTACGA 
    AGCATTGTGA GATTCATCAA TGAAAAGAAC ATCCATTTAG TCTGTGATGA GATTTATGCA 
    GCCACAGTTT TCAGCCAGCC TGATTTCATT AGCGTAGCGG AGATACTACA GGAAGATATT 
    GAATGCAATC TTGATCTTGT ACACATTGTT TACAGTCTCT CAAAGGACAT GGGCTTCCCT 
    GGCCTCAGGG TTGGCATTAT CTATTCTTAC AATGATGCAG TTGTGAGTTG CGCCCGCAAG 
    ATGTCAAGCT TCGGATTGGT ATCCACACAA ACTCAGTACC TGATAGCATC AATGCTATCG 
    GATAATGAAT TTGTGGAGAT GTTCATTAGG GAAAGCAAAA GTAGATTAGC CGCAAGGTAT 
    AGAGTCTTCA CTCGTGGACT TGATCAAGTA GGCATTGAGT GTTTGAAGAC AAGTAATGCT 
    GGCCTGTTTT TGTGGATGGA TTTGAGTAGA CTCCTCAAAG AGCAGACATT TGAAGCTGAA 
    ATGGAACTAT GGCGAGTTAT AATCCATGAA GTCAAGCTCA ACGTTTCGCC GGGTTGCTCT 
    TTTCATTGCT TGAAGCCAGG GTGGTTTAGG GTTTGTTTTG CCAACATGGA TGACGAGACC 
    ATGCAAGTAG CTTTGTCAAG AATTAAAACA TTTGTCAATA AAGAGGCGGG CACCAAGAAG 
    TCTAAGAAGA ACTTGCGCTG GCAAGGCAGT CTTAAACTGC TCAACTCTCC TCGAATATAC 
    GATGATTTCA TCAATTCTCC ACACTCTCCT ATACCTCAAT CACCTCTTGT TCGAGCAAGG 
    AATTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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