ORF » Species Summary » Populus trichocarpa » LOC7472451 cDNA ORF clone

LOC7472451 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7472451 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7472451 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa19016 XM_002312154.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0008s07440g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa435220 XM_002312154.3
Latest version!		 Populus trichocarpa arogenate dehydrogenase 1, chloroplastic (LOC7472451), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7472451 ( XM_002312154.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312190.2 Populus trichocarpa hypothetical protein (POPTR_0008s07440g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa19016
    Clone ID Related Accession (Same CDS sequence) XM_002312154.2
    Accession Version XM_002312154.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 732bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008474). On Dec 16, 2013 this sequence version replaced XM_002312154.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGATCAAAC AAGGGCATAC TTTACGGGCA ACTTCTCGTT CCGATCATTC TTCCCTCTGC 
    CAAGATTTGG GCATCTCATT CTTCAGGGAC ACGGGCACAT TTCTTGAAGC AAATAATGAT 
    GTCATTTTGA TTTGTACATC AATCCTATCC CTATCGAAGG TTCTCAATAC AATGCCACTA 
    CATTGCCTGA AACGGTCACC TCTCTTTGTG GATGTTCTCT CAGTCAAAGA GTACCCGAGA 
    GATATTCTAT TGAAAGTACT GCCAGAGGAA TTGGATGTGT TGTGCACTCA TCCGATGTTT 
    GGGCCGGAGA GTGGGAAAAA TGGATGGAAA GATCTTGCTT TTATGTATGA AAGAGTTCGA 
    ATAAAGGACG AAGCTACGTG CTCAAGTTTT CTACGAATTT TCGAAACTGA GGGTTGTAGA 
    ATGCTGGAAA TGTCTTGTGA AGAACATGAT ATGGTAGCTG CACGGAGTCA ATTTCTTACT 
    CACACAATTG GGAGGATTTT ATCGGAAATG GAGGTCAAGC CCACATCTAT GAGCACAAAA 
    GGTTTTGAGA CACTGATTCA TCTGAAAGAG AGCACCATGA AAGACAGCTC TGACCTGTTT 
    AGTGGCTTAT TCGTCTATAA TAGATTTGCC AAACAAGAGC TGAAGAACCT AGAACTTTCG 
    TTAGAAAAGG TTAAGCAAAT GCTACAAGAC AAGATGACCG AAGAGCAGAA TCTGAATGAG 
    TCTAAGTTTT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312190.2
    CDS117..848
    Translation

    Target ORF information:

    RefSeq Version XM_002312154.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0008s07440g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312154.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    ATGATCAAAC AAGGGCATAC TTTACGGGCA ACTTCTCGTT CCGATCATTC TTCCCTCTGC 
    CAAGATTTGG GCATCTCATT CTTCAGGGAC ACGGGCACAT TTCTTGAAGC AAATAATGAT 
    GTCATTTTGA TTTGTACATC AATCCTATCC CTATCGAAGG TTCTCAATAC AATGCCACTA 
    CATTGCCTGA AACGGTCACC TCTCTTTGTG GATGTTCTCT CAGTCAAAGA GTACCCGAGA 
    GATATTCTAT TGAAAGTACT GCCAGAGGAA TTGGATGTGT TGTGCACTCA TCCGATGTTT 
    GGGCCGGAGA GTGGGAAAAA TGGATGGAAA GATCTTGCTT TTATGTATGA AAGAGTTCGA 
    ATAAAGGACG AAGCTACGTG CTCAAGTTTT CTACGAATTT TCGAAACTGA GGGTTGTAGA 
    ATGCTGGAAA TGTCTTGTGA AGAACATGAT ATGGTAGCTG CACGGAGTCA ATTTCTTACT 
    CACACAATTG GGAGGATTTT ATCGGAAATG GAGGTCAAGC CCACATCTAT GAGCACAAAA 
    GGTTTTGAGA CACTGATTCA TCTGAAAGAG AGCACCATGA AAGACAGCTC TGACCTGTTT 
    AGTGGCTTAT TCGTCTATAA TAGATTTGCC AAACAAGAGC TGAAGAACCT AGAACTTTCG 
    TTAGAAAAGG TTAAGCAAAT GCTACAAGAC AAGATGACCG AAGAGCAGAA TCTGAATGAG 
    TCTAAGTTTT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7472451 ( XM_002312154.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002312190.3 Populus trichocarpa arogenate dehydrogenase 1, chloroplastic (LOC7472451), mRNA.
    Price & Availability↑
    CloneID OPa435220
    Clone ID Related Accession (Same CDS sequence) XM_002312154.3
    Accession Version XM_002312154.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 849bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product arogenate dehydrogenase 1, chloroplastic
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037292.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002312154.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGTTT CATCATCATC ATCTTCTTCT TCTTCTTCTT CTTCTTCTTC GCCTTCCAGA 
    AATCTGAAAA TAGGTATAGT GGGCTTTGGC CCCTTTGCAC AGTTCCTGGC AAAGATCATG 
    ATCAAACAAG GGCATACTTT ACGGGCAACT TCTCGTTCCG ATCATTCTTC CCTCTGCCAA 
    GATTTGGGCA TCTCATTCTT CAGGGACACG GGCACATTTC TTGAAGCAAA TAATGATGTC 
    ATTTTGATTT GTACATCAAT CCTATCCCTA TCGAAGGTTC TCAATACAAT GCCACTACAT 
    TGCCTGAAAC GGTCACCTCT CTTTGTGGAT GTTCTCTCAG TCAAAGAGTA CCCGAGAGAT 
    ATTCTATTGA AAGTACTGCC AGAGGAATTG GATGTGTTGT GCACTCATCC GATGTTTGGG 
    CCGGAGAGTG GGAAAAATGG ATGGAAAGAT CTTGCTTTTA TGTATGAAAG AGTTCGAATA 
    AAGGACGAAG CTACGTGCTC AAGTTTTCTA CGAATTTTCG AAACTGAGGG TTGTAGAATG 
    CTGGAAATGT CTTGTGAAGA ACATGATATG GTAGCTGCAC GGAGTCAATT TCTTACTCAC 
    ACAATTGGGA GGATTTTATC GGAAATGGAG GTCAAGCCCA CATCTATGAG CACAAAAGGT 
    TTTGAGACAC TGATTCATCT GAAAGAGAGC ACCATGAAAG ACAGCTCTGA CCTGTTTAGT 
    GGCTTATTCG TCTATAATAG ATTTGCCAAA CAAGAGCTGA AGAACCTAGA ACTTTCGTTA 
    GAAAAGGTTA AGCAAATGCT ACAAGACAAG ATGACCGAAG AGCAGAATCT GAATGAGTCT 
    AAGTTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002312190.3
    CDS82..930
    Translation

    Target ORF information:

    RefSeq Version XM_002312154.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa arogenate dehydrogenase 1, chloroplastic (LOC7472451), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002312154.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGCTGTTT CATCATCATC ATCTTCTTCT TCTTCTTCTT CTTCTTCTTC GCCTTCCAGA 
    AATCTGAAAA TAGGTATAGT GGGCTTTGGC CCCTTTGCAC AGTTCCTGGC AAAGATCATG 
    ATCAAACAAG GGCATACTTT ACGGGCAACT TCTCGTTCCG ATCATTCTTC CCTCTGCCAA 
    GATTTGGGCA TCTCATTCTT CAGGGACACG GGCACATTTC TTGAAGCAAA TAATGATGTC 
    ATTTTGATTT GTACATCAAT CCTATCCCTA TCGAAGGTTC TCAATACAAT GCCACTACAT 
    TGCCTGAAAC GGTCACCTCT CTTTGTGGAT GTTCTCTCAG TCAAAGAGTA CCCGAGAGAT 
    ATTCTATTGA AAGTACTGCC AGAGGAATTG GATGTGTTGT GCACTCATCC GATGTTTGGG 
    CCGGAGAGTG GGAAAAATGG ATGGAAAGAT CTTGCTTTTA TGTATGAAAG AGTTCGAATA 
    AAGGACGAAG CTACGTGCTC AAGTTTTCTA CGAATTTTCG AAACTGAGGG TTGTAGAATG 
    CTGGAAATGT CTTGTGAAGA ACATGATATG GTAGCTGCAC GGAGTCAATT TCTTACTCAC 
    ACAATTGGGA GGATTTTATC GGAAATGGAG GTCAAGCCCA CATCTATGAG CACAAAAGGT 
    TTTGAGACAC TGATTCATCT GAAAGAGAGC ACCATGAAAG ACAGCTCTGA CCTGTTTAGT 
    GGCTTATTCG TCTATAATAG ATTTGCCAAA CAAGAGCTGA AGAACCTAGA ACTTTCGTTA 
    GAAAAGGTTA AGCAAATGCT ACAAGACAAG ATGACCGAAG AGCAGAATCT GAATGAGTCT 
    AAGTTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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