ORF » Species Summary » Populus trichocarpa » LOC7472084 cDNA ORF clone

LOC7472084 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7472084 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7472084 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa21139 XM_002313641.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0009s14520g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa436411 XM_024608689.1
Latest version!		 Populus trichocarpa glycerol-3-phosphate acyltransferase 9 (LOC7472084), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7472084 ( XM_002313641.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002313677.2 Populus trichocarpa hypothetical protein (POPTR_0009s14520g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa21139
    Clone ID Related Accession (Same CDS sequence) XM_002313641.2
    Accession Version XM_002313641.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 960bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008475). On Dec 16, 2013 this sequence version replaced XM_002313641.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAATCAGG ACTCATTTAC ACGATGTTTC AAGTCAAATC CTCCAGAACC GTGGAACTGG 
    AATGTGTATT TGTTTCCCCT TTGGTGCTGT GGTGTGGTGA TTCGATATGG GATTTTGTTC 
    CCTGTCAGGG TTCTGGTACT GGCAATTGGG TGGATCATTT TTCTTTCATC CTACATTCCA 
    GTGCATTTGC TGTTGAAAGG GCAAGACAAA CTGAGAAAAA AGATAGAGAG GAGTTTGGTG 
    GAGGTAATTT GTATGTTTTT TGTTGCATCA TGGACTGGAG TTGTCAAGTA CCATGGACCG 
    AGACCTAGCA GGCGGCCTAA ACAGGTTTTT GTGGCCAACC ATACTTCCAT GATTGATTTC 
    ATCATCTTAG AACAGATGAC ACCATTTGCT GTGATCATGC AGAAACACCC TGGTTGGGTT 
    GGACTTTTGC AAAGCACTAT ATTAGAGAGT GTAGGATGTA TCTGGTTCCA TCGTTCAGAG 
    GCTAAGGATC GTGAAATTGT AGCAAAGAAA TTAAAGGATC ACGTTCAGGG AGCTGATAAT 
    AACCCTCTTC TCATATTTCC TGAAGGAACT TGTGTAAATA ACCACTACAC TGTGATGTTT 
    AAGAAGGGTG CGTTTGAACT AGACTCTACT GTTTGTCCAA TTGCGATCAA GTACAATAAA 
    ATTTTTGTTG ATGCCTTTTG GAACAGCCGA AAGCAGTCCT TCACAACACA TCTGCTGCAG 
    CTGATGACAT CCTGGGCTGT TGTTTGTGAT GTATGGTACT TGGAGCCCCA AAATCTGAGA 
    CCTGGAGAGA CTCCCATTGA GTTTGCAGAG AGGGTTAGAG GCATTATATC TGCGCGAGCA 
    GGTCTGAAAA AAGTTCCTTG GGATGGATAT CTGAAATATT CTCGCCCTAG CCCAAAACAT 
    AGAGAGCGCA AGCAACAAAG TTTTGCTGAG TCAGTACTAC GGAGTCTGGA GGAGAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002313677.2
    CDS46..1005
    Translation

    Target ORF information:

    RefSeq Version XM_002313641.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0009s14520g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002313641.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAATCAGG ACTCATTTAC ACGATGTTTC AAGTCAAATC CTCCAGAACC GTGGAACTGG 
    AATGTGTATT TGTTTCCCCT TTGGTGCTGT GGTGTGGTGA TTCGATATGG GATTTTGTTC 
    CCTGTCAGGG TTCTGGTACT GGCAATTGGG TGGATCATTT TTCTTTCATC CTACATTCCA 
    GTGCATTTGC TGTTGAAAGG GCAAGACAAA CTGAGAAAAA AGATAGAGAG GAGTTTGGTG 
    GAGGTAATTT GTATGTTTTT TGTTGCATCA TGGACTGGAG TTGTCAAGTA CCATGGACCG 
    AGACCTAGCA GGCGGCCTAA ACAGGTTTTT GTGGCCAACC ATACTTCCAT GATTGATTTC 
    ATCATCTTAG AACAGATGAC ACCATTTGCT GTGATCATGC AGAAACACCC TGGTTGGGTT 
    GGACTTTTGC AAAGCACTAT ATTAGAGAGT GTAGGATGTA TCTGGTTCCA TCGTTCAGAG 
    GCTAAGGATC GTGAAATTGT AGCAAAGAAA TTAAAGGATC ACGTTCAGGG AGCTGATAAT 
    AACCCTCTTC TCATATTTCC TGAAGGAACT TGTGTAAATA ACCACTACAC TGTGATGTTT 
    AAGAAGGGTG CGTTTGAACT AGACTCTACT GTTTGTCCAA TTGCGATCAA GTACAATAAA 
    ATTTTTGTTG ATGCCTTTTG GAACAGCCGA AAGCAGTCCT TCACAACACA TCTGCTGCAG 
    CTGATGACAT CCTGGGCTGT TGTTTGTGAT GTATGGTACT TGGAGCCCCA AAATCTGAGA 
    CCTGGAGAGA CTCCCATTGA GTTTGCAGAG AGGGTTAGAG GCATTATATC TGCGCGAGCA 
    GGTCTGAAAA AAGTTCCTTG GGATGGATAT CTGAAATATT CTCGCCCTAG CCCAAAACAT 
    AGAGAGCGCA AGCAACAAAG TTTTGCTGAG TCAGTACTAC GGAGTCTGGA GGAGAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7472084 ( XM_024608689.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024464457.1 Populus trichocarpa glycerol-3-phosphate acyltransferase 9 (LOC7472084), mRNA.
    Price & Availability↑
    CloneID OPa436411
    Clone ID Related Accession (Same CDS sequence) XM_024608689.1
    Accession Version XM_024608689.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1128bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product glycerol-3-phosphate acyltransferase 9
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037293.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGATACTC CTGGGAACTT GAAGACATCA AGCTCCGAAT TAGACCTGGA TCGTCCCAAC 
    ATCGAAGACT ACCTTCCTTC CGGATCCTCC ATTCAGGAGC CTATTGGCAA GCTTCGCTTG 
    CGTGATTTGC TTGATATTTC ACCTACTCTC ACAGAAGCAG CTGGTGCCAT TGTTGATGAC 
    TCATTTACAC GATGTTTCAA GTCAAATCCT CCAGAACCGT GGAACTGGAA TGTGTATTTG 
    TTTCCCCTTT GGTGCTGTGG TGTGGTGATT CGATATGGGA TTTTGTTCCC TGTCAGGGTT 
    CTGGTACTGG CAATTGGGTG GATCATTTTT CTTTCATCCT ACATTCCAGT GCATTTGCTG 
    TTGAAAGGGC AAGACAAACT GAGAAAAAAG ATAGAGAGGA GTTTGGTGGA GGTAATTTGT 
    ATGTTTTTTG TTGCATCATG GACTGGAGTT GTCAAGTACC ATGGACCGAG ACCTAGCAGG 
    CGGCCTAAAC AGGTTTTTGT GGCCAACCAT ACTTCCATGA TTGATTTCAT CATCTTAGAA 
    CAGATGACAC CATTTGCTGT GATCATGCAG AAACACCCTG GTTGGGTTGG ACTTTTGCAA 
    AGCACTATAT TAGAGAGTGT AGGATGTATC TGGTTCCATC GTTCAGAGGC TAAGGATCGT 
    GAAATTGTAG CAAAGAAATT AAAGGATCAC GTTCAGGGAG CTGATAATAA CCCTCTTCTC 
    ATATTTCCTG AAGGAACTTG TGTAAATAAC CACTACACTG TGATGTTTAA GAAGGGTGCG 
    TTTGAACTAG ACTCTACTGT TTGTCCAATT GCGATCAAGT ACAATAAAAT TTTTGTTGAT 
    GCCTTTTGGA ACAGCCGAAA GCAGTCCTTC ACAACACATC TGCTGCAGCT GATGACATCC 
    TGGGCTGTTG TTTGTGATGT ATGGTACTTG GAGCCCCAAA ATCTGAGACC TGGAGAGACT 
    CCCATTGAGT TTGCAGAGAG GGTTAGAGGC ATTATATCTG CGCGAGCAGG TCTGAAAAAA 
    GTTCCTTGGG ATGGATATCT GAAATATTCT CGCCCTAGCC CAAAACATAG AGAGCGCAAG 
    CAACAAAGTT TTGCTGAGTC AGTACTACGG AGTCTGGAGG AGAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024464457.1
    CDS59..1186
    Translation

    Target ORF information:

    RefSeq Version XM_024608689.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa glycerol-3-phosphate acyltransferase 9 (LOC7472084), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024608689.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGGATACTC CTGGGAACTT GAAGACATCA AGCTCCGAAT TAGACCTGGA TCGTCCCAAC 
    ATCGAAGACT ACCTTCCTTC CGGATCCTCC ATTCAGGAGC CTATTGGCAA GCTTCGCTTG 
    CGTGATTTGC TTGATATTTC ACCTACTCTC ACAGAAGCAG CTGGTGCCAT TGTTGATGAC 
    TCATTTACAC GATGTTTCAA GTCAAATCCT CCAGAACCGT GGAACTGGAA TGTGTATTTG 
    TTTCCCCTTT GGTGCTGTGG TGTGGTGATT CGATATGGGA TTTTGTTCCC TGTCAGGGTT 
    CTGGTACTGG CAATTGGGTG GATCATTTTT CTTTCATCCT ACATTCCAGT GCATTTGCTG 
    TTGAAAGGGC AAGACAAACT GAGAAAAAAG ATAGAGAGGA GTTTGGTGGA GGTAATTTGT 
    ATGTTTTTTG TTGCATCATG GACTGGAGTT GTCAAGTACC ATGGACCGAG ACCTAGCAGG 
    CGGCCTAAAC AGGTTTTTGT GGCCAACCAT ACTTCCATGA TTGATTTCAT CATCTTAGAA 
    CAGATGACAC CATTTGCTGT GATCATGCAG AAACACCCTG GTTGGGTTGG ACTTTTGCAA 
    AGCACTATAT TAGAGAGTGT AGGATGTATC TGGTTCCATC GTTCAGAGGC TAAGGATCGT 
    GAAATTGTAG CAAAGAAATT AAAGGATCAC GTTCAGGGAG CTGATAATAA CCCTCTTCTC 
    ATATTTCCTG AAGGAACTTG TGTAAATAAC CACTACACTG TGATGTTTAA GAAGGGTGCG 
    TTTGAACTAG ACTCTACTGT TTGTCCAATT GCGATCAAGT ACAATAAAAT TTTTGTTGAT 
    GCCTTTTGGA ACAGCCGAAA GCAGTCCTTC ACAACACATC TGCTGCAGCT GATGACATCC 
    TGGGCTGTTG TTTGTGATGT ATGGTACTTG GAGCCCCAAA ATCTGAGACC TGGAGAGACT 
    CCCATTGAGT TTGCAGAGAG GGTTAGAGGC ATTATATCTG CGCGAGCAGG TCTGAAAAAA 
    GTTCCTTGGG ATGGATATCT GAAATATTCT CGCCCTAGCC CAAAACATAG AGAGCGCAAG 
    CAACAAAGTT TTGCTGAGTC AGTACTACGG AGTCTGGAGG AGAAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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