ORF » Species Summary » Populus trichocarpa » POPTR_0001s47700g cDNA ORF clone

POPTR_0001s47700g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0001s47700g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0001s47700g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa00972 XM_002299046.2
Latest version!		 Populus trichocarpa peroxisomal targeting signal-1 receptor family protein (POPTR_0001s47700g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa423098 XM_024593631.1
Latest version!		 Populus trichocarpa peroxisome biogenesis protein 5 (LOC7471722), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa423099 XM_024593632.1
Latest version!		 Populus trichocarpa peroxisome biogenesis protein 5 (LOC7471722), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0001s47700g ( XM_002299046.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002299082.1 Populus trichocarpa peroxisomal targeting signal-1 receptor family protein (POPTR_0001s47700g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa00972
    Clone ID Related Accession (Same CDS sequence) XM_002299046.2
    Accession Version XM_002299046.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2259bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product peroxisomal targeting signal-1 receptor family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008467). On Dec 16, 2013 this sequence version replaced XM_002299046.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCGATGC GAGAGCTTGT AACAGGAGCA GCAGCCTGTG CTGTTCCAGG TTCTTCCTCT 
    TCATCATCTA ATCCTCTCGG TGCTCTCGCC AATGCTCTTA TCGGTTCCTC TTCCAAGCCT 
    CTGGAAGGGC TGAAGGAAAT TCCAACCTCT ACAACCACAG CTACAGAGCC TCCGTTGTAC 
    CAGGATGCCA CTGCTGAGGA CCGCTTGAGA GGACTCCCTG GAGCTGACTT TGATCACTCC 
    TTTTCTCAGC ATCCTACTTC TCAGGGTTCA GAATTTCTTC GTCGCTTTCG CACTTCTGAT 
    CAGAATGGAT TTGCCAATGC TTGGGATGAG ATTCAGCGCT CTGGTCCTCC TCCTCCTCCT 
    GCTCTATTGG ATCACGGCCT ACCTCCTCCT CAGCTTCAAC CAACTTTGGA CGGACCACCC 
    CAAAGAGTGT TGTCAAACTT TTTGCACTCC TTTGTGGGCA GTAGCCATGG TGGAATTCCA 
    TTTCGTCCTG CTCCACTACC TGCATTAGGA TTGTCTGAAG GTGACAAACA ATGCATACGT 
    GACCGTAGCA GCATTATGGC CCGGCATTTT TTTGCTGACA AGAGTGAAGA TTTTATCAAT 
    ACACAGGTGA ATGCACTTTT GTCTTCGTTA GATATTGATG GTGATGTGCG GGTTAAGGGA 
    CCTTTACCCG GTAGGTTCCA AGAGCTAGAG GATTACTGGA ACGAGTCTCA AGCTGCTCGG 
    AGACCTGGTC CTCCTCAAGC TGATGGATGG GTTACTGAAT TTAGCCAACA CAGAATAGAC 
    CATGGTGATC CTAATGTTTG GGCTCACTCA TTTGAACAGC AGCATGGTGC TAATGGTTGG 
    GCCTCTGAGT TTGAGCAGGA ACAGTTGATC TCAGCAGCAG ATCAAATGGG AGGTGCAAAT 
    ATCTCAAACT TATCTACAAT GGAACAGACT CGAATGCTTG CACACACACT AGCTCAGAAC 
    AATGACCCCA AATTTCAGAA TTCTAAGTTT CTTCAATTCG TCTCAAAGAT GAGTCGCGGT 
    GAACTTATTA TTGATGACAA TCAAGTCAAG CCAGCTGCGT TGTCTTCACC AGGGGATTGG 
    GCAACGGAAT ATCAGCAAAA ATATTCTGGG GGTCGTTGGG CTGATGAATA TGCACGTGAC 
    CAGGCAAGTA AAGCTCTTCT TTCTCATGGA CCTGATCAAT GGGCGAATGA GTTTGCTGCT 
    GAAAGAGAGC AAAGTCGGCC TTTTGATGAT AAGTGGGTAA ATGAATTTTC AAAGTTGCAT 
    GTTGATGACT GGGCAGATGA ATTTGGACGA CAGGTTGGAG AAGGGGCTTT TGGGGAGATT 
    TCAACTGATA ATTGGGCAGA TACTTATGAT GAGTACCTAA GTGAGCAAGT AGTTGCCAAG 
    CAGAAGCCAG ATGCTTCAAG GGGCGTCTAT GTGTTTACAG ACATGAATCC TTATGTCGGT 
    CACCCGAATC CTTTGAAAGA AGGCCAGGAC CTATTCCGCA AGGGGCTTTT GAGTGAAGCT 
    GTGCTTGCTT TAGAGGCTGA AGTTTTGAAA AACCCAGATA ACGCTGAAGG TTGGAGGTTG 
    CTTGGAATAG CACATGCAGA GAATGATGAT GATCAACAGG CGATTGCAGC CATGATGCGC 
    GCGCATGAAG CTGATCCTAC AAATCTTGAA GTGCTTCTTG CTCTTGGTGT GAGCCATACA 
    AATGAGTTTG AGCAGGCAGC TGCATTGAAA TATTTATATG GATGGCTACA ACATCATCAA 
    AAGTACAGAA CACTAGCCAC TCCAGAGCTT TCTGATTCTT TGTATTATGC TAATGTTGCT 
    AGATTATTCA ATGAAGCTGC TCAGATGGCA CCTGAGGATG CTGATGTGCA CATAGTACTT 
    GGTGTCCTGT ACAATCTGTC CCGGGAATAT GACAAAGCCA TTGCTTTTTT CCAGACAGCT 
    TTGAAACTCA AGCCTCAGGA TTACTCTCTT TGGAACAAGC TTGGTGCAAC ACAAGCCAAT 
    AGTGTTCAGA GTGCTGATGC AATATTGGCA TATCAGCAGG CACTTGATCT GAAGCCTAAC 
    TATGTTCGAG CATGGGCAAA CATGGGAATC AGTTATGCCA ACCAGGGTAT GTATGAGGAT 
    TCCATCCGAT ACTATGTTCG GGCACTTGCT ATGAATCCCA AGGCAGATAA TGCTTGGCAA 
    TATTTGAGGA TTTCTTTAAG TTTTGCTTCT AGGAACGACA TGTTGGAAGC TTGTGATTCT 
    CGAAATCTTG ATGCTCTACA GAAGGAGTTC CCACTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002299082.1
    CDS54..2312
    Translation

    Target ORF information:

    RefSeq Version XM_002299046.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa peroxisomal targeting signal-1 receptor family protein (POPTR_0001s47700g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002299046.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCGATGC GAGAGCTTGT AACAGGAGCA GCAGCCTGTG CTGTTCCAGG TTCTTCCTCT 
    TCATCATCTA ATCCTCTCGG TGCTCTCGCC AATGCTCTTA TCGGTTCCTC TTCCAAGCCT 
    CTGGAAGGGC TGAAGGAAAT TCCAACCTCT ACAACCACAG CTACAGAGCC TCCGTTGTAC 
    CAGGATGCCA CTGCTGAGGA CCGCTTGAGA GGACTCCCTG GAGCTGACTT TGATCACTCC 
    TTTTCTCAGC ATCCTACTTC TCAGGGTTCA GAATTTCTTC GTCGCTTTCG CACTTCTGAT 
    CAGAATGGAT TTGCCAATGC TTGGGATGAG ATTCAGCGCT CTGGTCCTCC TCCTCCTCCT 
    GCTCTATTGG ATCACGGCCT ACCTCCTCCT CAGCTTCAAC CAACTTTGGA CGGACCACCC 
    CAAAGAGTGT TGTCAAACTT TTTGCACTCC TTTGTGGGCA GTAGCCATGG TGGAATTCCA 
    TTTCGTCCTG CTCCACTACC TGCATTAGGA TTGTCTGAAG GTGACAAACA ATGCATACGT 
    GACCGTAGCA GCATTATGGC CCGGCATTTT TTTGCTGACA AGAGTGAAGA TTTTATCAAT 
    ACACAGGTGA ATGCACTTTT GTCTTCGTTA GATATTGATG GTGATGTGCG GGTTAAGGGA 
    CCTTTACCCG GTAGGTTCCA AGAGCTAGAG GATTACTGGA ACGAGTCTCA AGCTGCTCGG 
    AGACCTGGTC CTCCTCAAGC TGATGGATGG GTTACTGAAT TTAGCCAACA CAGAATAGAC 
    CATGGTGATC CTAATGTTTG GGCTCACTCA TTTGAACAGC AGCATGGTGC TAATGGTTGG 
    GCCTCTGAGT TTGAGCAGGA ACAGTTGATC TCAGCAGCAG ATCAAATGGG AGGTGCAAAT 
    ATCTCAAACT TATCTACAAT GGAACAGACT CGAATGCTTG CACACACACT AGCTCAGAAC 
    AATGACCCCA AATTTCAGAA TTCTAAGTTT CTTCAATTCG TCTCAAAGAT GAGTCGCGGT 
    GAACTTATTA TTGATGACAA TCAAGTCAAG CCAGCTGCGT TGTCTTCACC AGGGGATTGG 
    GCAACGGAAT ATCAGCAAAA ATATTCTGGG GGTCGTTGGG CTGATGAATA TGCACGTGAC 
    CAGGCAAGTA AAGCTCTTCT TTCTCATGGA CCTGATCAAT GGGCGAATGA GTTTGCTGCT 
    GAAAGAGAGC AAAGTCGGCC TTTTGATGAT AAGTGGGTAA ATGAATTTTC AAAGTTGCAT 
    GTTGATGACT GGGCAGATGA ATTTGGACGA CAGGTTGGAG AAGGGGCTTT TGGGGAGATT 
    TCAACTGATA ATTGGGCAGA TACTTATGAT GAGTACCTAA GTGAGCAAGT AGTTGCCAAG 
    CAGAAGCCAG ATGCTTCAAG GGGCGTCTAT GTGTTTACAG ACATGAATCC TTATGTCGGT 
    CACCCGAATC CTTTGAAAGA AGGCCAGGAC CTATTCCGCA AGGGGCTTTT GAGTGAAGCT 
    GTGCTTGCTT TAGAGGCTGA AGTTTTGAAA AACCCAGATA ACGCTGAAGG TTGGAGGTTG 
    CTTGGAATAG CACATGCAGA GAATGATGAT GATCAACAGG CGATTGCAGC CATGATGCGC 
    GCGCATGAAG CTGATCCTAC AAATCTTGAA GTGCTTCTTG CTCTTGGTGT GAGCCATACA 
    AATGAGTTTG AGCAGGCAGC TGCATTGAAA TATTTATATG GATGGCTACA ACATCATCAA 
    AAGTACAGAA CACTAGCCAC TCCAGAGCTT TCTGATTCTT TGTATTATGC TAATGTTGCT 
    AGATTATTCA ATGAAGCTGC TCAGATGGCA CCTGAGGATG CTGATGTGCA CATAGTACTT 
    GGTGTCCTGT ACAATCTGTC CCGGGAATAT GACAAAGCCA TTGCTTTTTT CCAGACAGCT 
    TTGAAACTCA AGCCTCAGGA TTACTCTCTT TGGAACAAGC TTGGTGCAAC ACAAGCCAAT 
    AGTGTTCAGA GTGCTGATGC AATATTGGCA TATCAGCAGG CACTTGATCT GAAGCCTAAC 
    TATGTTCGAG CATGGGCAAA CATGGGAATC AGTTATGCCA ACCAGGGTAT GTATGAGGAT 
    TCCATCCGAT ACTATGTTCG GGCACTTGCT ATGAATCCCA AGGCAGATAA TGCTTGGCAA 
    TATTTGAGGA TTTCTTTAAG TTTTGCTTCT AGGAACGACA TGTTGGAAGC TTGTGATTCT 
    CGAAATCTTG ATGCTCTACA GAAGGAGTTC CCACTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s47700g ( XM_024593631.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024449399.1 Populus trichocarpa peroxisome biogenesis protein 5 (LOC7471722), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa423098
    Clone ID Related Accession (Same CDS sequence) XM_024593631.1
    Accession Version XM_024593631.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2244bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product peroxisome biogenesis protein 5 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCGATGC GAGAGCTTGT AACAGGAGCA GCAGCCTGTG CTGTTCCAGG TTCTTCCTCT 
    TCATCATCTA ATCCTCTCGG TGCTCTCGCC AATGCTCTTA TCGGTTCCTC TTCCAAGCCT 
    CTGGAAGGGC TGAAGGAAAT TCCAACCTCT ACAACCACAG CTACAGAGCC TCCGTTGTAC 
    CAGGATGCCA CTGCTGAGGA CCGCTTGAGA GGACTCCCTG GAGCTGACTT TGATCACTCC 
    TTTTCTCAGC ATCCTACTTC TCAGGGTTCA GAATTTCTTC GTCGCTTTCG CACTTCTGAT 
    CAGAATGGAT TTGCCAATGC TTGGGATGAG ATTCAGCGCT CTGGTCCTCC TCCTCCTCCT 
    GCTCTATTGG ATCACGGCCT ACCTCCTCCT CAGCTTCAAC CAACTTTGGA CGGACCACCC 
    CAAAGAGTGT TGTCAAACTT TTTGCACTCC TTTGTGGGCA GTAGCCATGG TGGAATTCCA 
    TTTCGTCCTG CTCCACTACC TGCATTAGGA TTGTCTGAAG GTGACAAACA ATGCATACGT 
    GACCGTAGCA GCATTATGGC CCGGCATTTT TTTGCTGACA AGAGTGAAGA TTTTATCAAT 
    ACACAGGTGA ATGCACTTTT GTCTTCGTTA GATATTGATG GTGATGTGCG GGTTAAGGGA 
    CCTTTACCCG GTAGGTTCCA AGAGCTAGAG GATTACTGGA ACGAGTCTCA AGCTGCTCGG 
    AGACCTGGTC CTCCTCAAGC TGATGGATGG GTTACTGAAT TTAGCCAACA CAGAATAGAC 
    CATGGTGATC CTAATGTTTG GGCTCACTCA TTTGAACAGC AGCATGGTGC TAATGGTTGG 
    GCCTCTGAGT TTGAGCAGGA ACAGTTGATC TCAGCAGCAG ATCAAATGGG AGGTGCAAAT 
    ATCTCAAACT TATCTACAAT GGAACAGACT CGAATGCTTG CACACACACT AGCTCAGAAC 
    AATGACCCCA AATTTCAGAA TTCTAAGTTT CTTCAATTCG TCTCAAAGAT GAGTCGCGGT 
    GAACTTATTA TTGATGACAA TCAAGTCAAG CCAGCTGCGT TGTCTTCACC AGGGGATTGG 
    GCAACGGAAT ATCAGCAAAA ATATTCTGGG GGTCGTTGGG CTGATGAATA TGCACGTGAC 
    CAGCTTTCTC ATGGACCTGA TCAATGGGCG AATGAGTTTG CTGCTGAAAG AGAGCAAAGT 
    CGGCCTTTTG ATGATAAGTG GGTAAATGAA TTTTCAAAGT TGCATGTTGA TGACTGGGCA 
    GATGAATTTG GACGACAGGT TGGAGAAGGG GCTTTTGGGG AGATTTCAAC TGATAATTGG 
    GCAGATACTT ATGATGAGTA CCTAAGTGAG CAAGTAGTTG CCAAGCAGAA GCCAGATGCT 
    TCAAGGGGCG TCTATGTGTT TACAGACATG AATCCTTATG TCGGTCACCC GAATCCTTTG 
    AAAGAAGGCC AGGACCTATT CCGCAAGGGG CTTTTGAGTG AAGCTGTGCT TGCTTTAGAG 
    GCTGAAGTTT TGAAAAACCC AGATAACGCT GAAGGTTGGA GGTTGCTTGG AATAGCACAT 
    GCAGAGAATG ATGATGATCA ACAGGCGATT GCAGCCATGA TGCGCGCGCA TGAAGCTGAT 
    CCTACAAATC TTGAAGTGCT TCTTGCTCTT GGTGTGAGCC ATACAAATGA GTTTGAGCAG 
    GCAGCTGCAT TGAAATATTT ATATGGATGG CTACAACATC ATCAAAAGTA CAGAACACTA 
    GCCACTCCAG AGCTTTCTGA TTCTTTGTAT TATGCTAATG TTGCTAGATT ATTCAATGAA 
    GCTGCTCAGA TGGCACCTGA GGATGCTGAT GTGCACATAG TACTTGGTGT CCTGTACAAT 
    CTGTCCCGGG AATATGACAA AGCCATTGCT TTTTTCCAGA CAGCTTTGAA ACTCAAGCCT 
    CAGGATTACT CTCTTTGGAA CAAGCTTGGT GCAACACAAG CCAATAGTGT TCAGAGTGCT 
    GATGCAATAT TGGCATATCA GCAGGCACTT GATCTGAAGC CTAACTATGT TCGAGCATGG 
    GCAAACATGG GAATCAGTTA TGCCAACCAG GGTATGTATG AGGATTCCAT CCGATACTAT 
    GTTCGGGCAC TTGCTATGAA TCCCAAGGCA GATAATGCTT GGCAATATTT GAGGATTTCT 
    TTAAGTTTTG CTTCTAGGAA CGACATGTTG GAAGCTTGTG ATTCTCGAAA TCTTGATGCT 
    CTACAGAAGG AGTTCCCACT ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024449399.1
    CDS78..2321
    Translation

    Target ORF information:

    RefSeq Version XM_024593631.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa peroxisome biogenesis protein 5 (LOC7471722), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024593631.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCGATGC GAGAGCTTGT AACAGGAGCA GCAGCCTGTG CTGTTCCAGG TTCTTCCTCT 
    TCATCATCTA ATCCTCTCGG TGCTCTCGCC AATGCTCTTA TCGGTTCCTC TTCCAAGCCT 
    CTGGAAGGGC TGAAGGAAAT TCCAACCTCT ACAACCACAG CTACAGAGCC TCCGTTGTAC 
    CAGGATGCCA CTGCTGAGGA CCGCTTGAGA GGACTCCCTG GAGCTGACTT TGATCACTCC 
    TTTTCTCAGC ATCCTACTTC TCAGGGTTCA GAATTTCTTC GTCGCTTTCG CACTTCTGAT 
    CAGAATGGAT TTGCCAATGC TTGGGATGAG ATTCAGCGCT CTGGTCCTCC TCCTCCTCCT 
    GCTCTATTGG ATCACGGCCT ACCTCCTCCT CAGCTTCAAC CAACTTTGGA CGGACCACCC 
    CAAAGAGTGT TGTCAAACTT TTTGCACTCC TTTGTGGGCA GTAGCCATGG TGGAATTCCA 
    TTTCGTCCTG CTCCACTACC TGCATTAGGA TTGTCTGAAG GTGACAAACA ATGCATACGT 
    GACCGTAGCA GCATTATGGC CCGGCATTTT TTTGCTGACA AGAGTGAAGA TTTTATCAAT 
    ACACAGGTGA ATGCACTTTT GTCTTCGTTA GATATTGATG GTGATGTGCG GGTTAAGGGA 
    CCTTTACCCG GTAGGTTCCA AGAGCTAGAG GATTACTGGA ACGAGTCTCA AGCTGCTCGG 
    AGACCTGGTC CTCCTCAAGC TGATGGATGG GTTACTGAAT TTAGCCAACA CAGAATAGAC 
    CATGGTGATC CTAATGTTTG GGCTCACTCA TTTGAACAGC AGCATGGTGC TAATGGTTGG 
    GCCTCTGAGT TTGAGCAGGA ACAGTTGATC TCAGCAGCAG ATCAAATGGG AGGTGCAAAT 
    ATCTCAAACT TATCTACAAT GGAACAGACT CGAATGCTTG CACACACACT AGCTCAGAAC 
    AATGACCCCA AATTTCAGAA TTCTAAGTTT CTTCAATTCG TCTCAAAGAT GAGTCGCGGT 
    GAACTTATTA TTGATGACAA TCAAGTCAAG CCAGCTGCGT TGTCTTCACC AGGGGATTGG 
    GCAACGGAAT ATCAGCAAAA ATATTCTGGG GGTCGTTGGG CTGATGAATA TGCACGTGAC 
    CAGCTTTCTC ATGGACCTGA TCAATGGGCG AATGAGTTTG CTGCTGAAAG AGAGCAAAGT 
    CGGCCTTTTG ATGATAAGTG GGTAAATGAA TTTTCAAAGT TGCATGTTGA TGACTGGGCA 
    GATGAATTTG GACGACAGGT TGGAGAAGGG GCTTTTGGGG AGATTTCAAC TGATAATTGG 
    GCAGATACTT ATGATGAGTA CCTAAGTGAG CAAGTAGTTG CCAAGCAGAA GCCAGATGCT 
    TCAAGGGGCG TCTATGTGTT TACAGACATG AATCCTTATG TCGGTCACCC GAATCCTTTG 
    AAAGAAGGCC AGGACCTATT CCGCAAGGGG CTTTTGAGTG AAGCTGTGCT TGCTTTAGAG 
    GCTGAAGTTT TGAAAAACCC AGATAACGCT GAAGGTTGGA GGTTGCTTGG AATAGCACAT 
    GCAGAGAATG ATGATGATCA ACAGGCGATT GCAGCCATGA TGCGCGCGCA TGAAGCTGAT 
    CCTACAAATC TTGAAGTGCT TCTTGCTCTT GGTGTGAGCC ATACAAATGA GTTTGAGCAG 
    GCAGCTGCAT TGAAATATTT ATATGGATGG CTACAACATC ATCAAAAGTA CAGAACACTA 
    GCCACTCCAG AGCTTTCTGA TTCTTTGTAT TATGCTAATG TTGCTAGATT ATTCAATGAA 
    GCTGCTCAGA TGGCACCTGA GGATGCTGAT GTGCACATAG TACTTGGTGT CCTGTACAAT 
    CTGTCCCGGG AATATGACAA AGCCATTGCT TTTTTCCAGA CAGCTTTGAA ACTCAAGCCT 
    CAGGATTACT CTCTTTGGAA CAAGCTTGGT GCAACACAAG CCAATAGTGT TCAGAGTGCT 
    GATGCAATAT TGGCATATCA GCAGGCACTT GATCTGAAGC CTAACTATGT TCGAGCATGG 
    GCAAACATGG GAATCAGTTA TGCCAACCAG GGTATGTATG AGGATTCCAT CCGATACTAT 
    GTTCGGGCAC TTGCTATGAA TCCCAAGGCA GATAATGCTT GGCAATATTT GAGGATTTCT 
    TTAAGTTTTG CTTCTAGGAA CGACATGTTG GAAGCTTGTG ATTCTCGAAA TCTTGATGCT 
    CTACAGAAGG AGTTCCCACT ATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0001s47700g ( XM_024593632.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024449400.1 Populus trichocarpa peroxisome biogenesis protein 5 (LOC7471722), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa423099
    Clone ID Related Accession (Same CDS sequence) XM_024593632.1
    Accession Version XM_024593632.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2238bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product peroxisome biogenesis protein 5 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037285.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCGATGC GAGAGCTTGT AACAGGAGCA GCAGCCTGTG CTGTTCCAGG TTCTTCCTCT 
    TCATCATCTA ATCCTCTCGG TGCTCTCGCC AATGCTCTTA TCGGTTCCTC TTCCAAGCCT 
    CTGGAAGGGC TGAAGGAAAT TCCAACCTCT ACAACCACAG CTACAGAGCC TCCGTTGTAC 
    CAGGATGCCA CTGCTGAGGA CCGCTTGAGA GGACTCCCTG GAGCTGACTT TGATCACTCC 
    TTTTCTCAGC ATCCTACTTC TCAGGGTTCA GAATTTCTTC GTCGCTTTCG CACTTCTGAT 
    CAGAATGGAT TTGCCAATGC TTGGGATGAG ATTCAGCGCT CTGGTCCTCC TCCTCCTCCT 
    GCTCTATTGG ATCACGGCCT ACCTCCTCCT CAGCTTCAAC CAACTTTGGA CGGACCACCC 
    CAAAGAGTGT TGTCAAACTT TTTGCACTCC TTTGTGGGCA GTAGCCATGG TGGAATTCCA 
    TTTCGTCCTG CTCCACTACC TGCATTAGGA TTGTCTGAAG GTGACAAACA ATGCATACGT 
    GACCGTAGCA GCATTATGGC CCGGCATTTT TTTGCTGACA AGAGTGAAGA TTTTATCAAT 
    ACACAGGTGA ATGCACTTTT GTCTTCGTTA GATATTGATG GTGATGTGCG GGTTAAGGGA 
    CCTTTACCCG GTAGGTTCCA AGAGCTAGAG GATTACTGGA ACGAGTCTCA AGCTGCTCGG 
    AGACCTGGTC CTCCTCAAGC TGATGGATGG GTTACTGAAT TTAGCCAACA CAGAATAGAC 
    CATGGTGATC CTAATGTTTG GGCTCACTCA TTTGAACAGC AGCATGGTGC TAATGGTTGG 
    GCCTCTGAGT TTGAGCAGTT GATCTCAGCA GCAGATCAAA TGGGAGGTGC AAATATCTCA 
    AACTTATCTA CAATGGAACA GACTCGAATG CTTGCACACA CACTAGCTCA GAACAATGAC 
    CCCAAATTTC AGAATTCTAA GTTTCTTCAA TTCGTCTCAA AGATGAGTCG CGGTGAACTT 
    ATTATTGATG ACAATCAAGT CAAGCCAGCT GCGTTGTCTT CACCAGGGGA TTGGGCAACG 
    GAATATCAGC AAAAATATTC TGGGGGTCGT TGGGCTGATG AATATGCACG TGACCAGCTT 
    TCTCATGGAC CTGATCAATG GGCGAATGAG TTTGCTGCTG AAAGAGAGCA AAGTCGGCCT 
    TTTGATGATA AGTGGGTAAA TGAATTTTCA AAGTTGCATG TTGATGACTG GGCAGATGAA 
    TTTGGACGAC AGGTTGGAGA AGGGGCTTTT GGGGAGATTT CAACTGATAA TTGGGCAGAT 
    ACTTATGATG AGTACCTAAG TGAGCAAGTA GTTGCCAAGC AGAAGCCAGA TGCTTCAAGG 
    GGCGTCTATG TGTTTACAGA CATGAATCCT TATGTCGGTC ACCCGAATCC TTTGAAAGAA 
    GGCCAGGACC TATTCCGCAA GGGGCTTTTG AGTGAAGCTG TGCTTGCTTT AGAGGCTGAA 
    GTTTTGAAAA ACCCAGATAA CGCTGAAGGT TGGAGGTTGC TTGGAATAGC ACATGCAGAG 
    AATGATGATG ATCAACAGGC GATTGCAGCC ATGATGCGCG CGCATGAAGC TGATCCTACA 
    AATCTTGAAG TGCTTCTTGC TCTTGGTGTG AGCCATACAA ATGAGTTTGA GCAGGCAGCT 
    GCATTGAAAT ATTTATATGG ATGGCTACAA CATCATCAAA AGTACAGAAC ACTAGCCACT 
    CCAGAGCTTT CTGATTCTTT GTATTATGCT AATGTTGCTA GATTATTCAA TGAAGCTGCT 
    CAGATGGCAC CTGAGGATGC TGATGTGCAC ATAGTACTTG GTGTCCTGTA CAATCTGTCC 
    CGGGAATATG ACAAAGCCAT TGCTTTTTTC CAGACAGCTT TGAAACTCAA GCCTCAGGAT 
    TACTCTCTTT GGAACAAGCT TGGTGCAACA CAAGCCAATA GTGTTCAGAG TGCTGATGCA 
    ATATTGGCAT ATCAGCAGGC ACTTGATCTG AAGCCTAACT ATGTTCGAGC ATGGGCAAAC 
    ATGGGAATCA GTTATGCCAA CCAGGGTATG TATGAGGATT CCATCCGATA CTATGTTCGG 
    GCACTTGCTA TGAATCCCAA GGCAGATAAT GCTTGGCAAT ATTTGAGGAT TTCTTTAAGT 
    TTTGCTTCTA GGAACGACAT GTTGGAAGCT TGTGATTCTC GAAATCTTGA TGCTCTACAG 
    AAGGAGTTCC CACTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024449400.1
    CDS79..2316
    Translation

    Target ORF information:

    RefSeq Version XM_024593632.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa peroxisome biogenesis protein 5 (LOC7471722), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024593632.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    ATGGCGATGC GAGAGCTTGT AACAGGAGCA GCAGCCTGTG CTGTTCCAGG TTCTTCCTCT 
    TCATCATCTA ATCCTCTCGG TGCTCTCGCC AATGCTCTTA TCGGTTCCTC TTCCAAGCCT 
    CTGGAAGGGC TGAAGGAAAT TCCAACCTCT ACAACCACAG CTACAGAGCC TCCGTTGTAC 
    CAGGATGCCA CTGCTGAGGA CCGCTTGAGA GGACTCCCTG GAGCTGACTT TGATCACTCC 
    TTTTCTCAGC ATCCTACTTC TCAGGGTTCA GAATTTCTTC GTCGCTTTCG CACTTCTGAT 
    CAGAATGGAT TTGCCAATGC TTGGGATGAG ATTCAGCGCT CTGGTCCTCC TCCTCCTCCT 
    GCTCTATTGG ATCACGGCCT ACCTCCTCCT CAGCTTCAAC CAACTTTGGA CGGACCACCC 
    CAAAGAGTGT TGTCAAACTT TTTGCACTCC TTTGTGGGCA GTAGCCATGG TGGAATTCCA 
    TTTCGTCCTG CTCCACTACC TGCATTAGGA TTGTCTGAAG GTGACAAACA ATGCATACGT 
    GACCGTAGCA GCATTATGGC CCGGCATTTT TTTGCTGACA AGAGTGAAGA TTTTATCAAT 
    ACACAGGTGA ATGCACTTTT GTCTTCGTTA GATATTGATG GTGATGTGCG GGTTAAGGGA 
    CCTTTACCCG GTAGGTTCCA AGAGCTAGAG GATTACTGGA ACGAGTCTCA AGCTGCTCGG 
    AGACCTGGTC CTCCTCAAGC TGATGGATGG GTTACTGAAT TTAGCCAACA CAGAATAGAC 
    CATGGTGATC CTAATGTTTG GGCTCACTCA TTTGAACAGC AGCATGGTGC TAATGGTTGG 
    GCCTCTGAGT TTGAGCAGTT GATCTCAGCA GCAGATCAAA TGGGAGGTGC AAATATCTCA 
    AACTTATCTA CAATGGAACA GACTCGAATG CTTGCACACA CACTAGCTCA GAACAATGAC 
    CCCAAATTTC AGAATTCTAA GTTTCTTCAA TTCGTCTCAA AGATGAGTCG CGGTGAACTT 
    ATTATTGATG ACAATCAAGT CAAGCCAGCT GCGTTGTCTT CACCAGGGGA TTGGGCAACG 
    GAATATCAGC AAAAATATTC TGGGGGTCGT TGGGCTGATG AATATGCACG TGACCAGCTT 
    TCTCATGGAC CTGATCAATG GGCGAATGAG TTTGCTGCTG AAAGAGAGCA AAGTCGGCCT 
    TTTGATGATA AGTGGGTAAA TGAATTTTCA AAGTTGCATG TTGATGACTG GGCAGATGAA 
    TTTGGACGAC AGGTTGGAGA AGGGGCTTTT GGGGAGATTT CAACTGATAA TTGGGCAGAT 
    ACTTATGATG AGTACCTAAG TGAGCAAGTA GTTGCCAAGC AGAAGCCAGA TGCTTCAAGG 
    GGCGTCTATG TGTTTACAGA CATGAATCCT TATGTCGGTC ACCCGAATCC TTTGAAAGAA 
    GGCCAGGACC TATTCCGCAA GGGGCTTTTG AGTGAAGCTG TGCTTGCTTT AGAGGCTGAA 
    GTTTTGAAAA ACCCAGATAA CGCTGAAGGT TGGAGGTTGC TTGGAATAGC ACATGCAGAG 
    AATGATGATG ATCAACAGGC GATTGCAGCC ATGATGCGCG CGCATGAAGC TGATCCTACA 
    AATCTTGAAG TGCTTCTTGC TCTTGGTGTG AGCCATACAA ATGAGTTTGA GCAGGCAGCT 
    GCATTGAAAT ATTTATATGG ATGGCTACAA CATCATCAAA AGTACAGAAC ACTAGCCACT 
    CCAGAGCTTT CTGATTCTTT GTATTATGCT AATGTTGCTA GATTATTCAA TGAAGCTGCT 
    CAGATGGCAC CTGAGGATGC TGATGTGCAC ATAGTACTTG GTGTCCTGTA CAATCTGTCC 
    CGGGAATATG ACAAAGCCAT TGCTTTTTTC CAGACAGCTT TGAAACTCAA GCCTCAGGAT 
    TACTCTCTTT GGAACAAGCT TGGTGCAACA CAAGCCAATA GTGTTCAGAG TGCTGATGCA 
    ATATTGGCAT ATCAGCAGGC ACTTGATCTG AAGCCTAACT ATGTTCGAGC ATGGGCAAAC 
    ATGGGAATCA GTTATGCCAA CCAGGGTATG TATGAGGATT CCATCCGATA CTATGTTCGG 
    GCACTTGCTA TGAATCCCAA GGCAGATAAT GCTTGGCAAT ATTTGAGGAT TTCTTTAAGT 
    TTTGCTTCTA GGAACGACAT GTTGGAAGCT TGTGATTCTC GAAATCTTGA TGCTCTACAG 
    AAGGAGTTCC CACTATAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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