ORF » Species Summary » Populus trichocarpa » LOC7469116 cDNA ORF clone

LOC7469116 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7469116 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7469116 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa11924 XM_002307368.2
Latest version!		 Populus trichocarpa DNA/panthothenate metabolism flavoprotein (POPTR_0005s16390g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa430366 XM_024601955.1
Latest version!		 Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa430366 XM_024601954.1
Latest version!		 Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa430367 XM_024601957.1
Latest version!		 Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7469116 ( XM_002307368.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002307404.2 Populus trichocarpa DNA/panthothenate metabolism flavoprotein (POPTR_0005s16390g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa11924
    Clone ID Related Accession (Same CDS sequence) XM_002307368.2
    Accession Version XM_002307368.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 978bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product DNA/panthothenate metabolism flavoprotein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). On Dec 16, 2013 this sequence version replaced XM_002307368.1. COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGGCAAG AAACTAACTC ATTTACTGGT GTTTAATCAG 
    GTGTTGGCTG TTTTGATCAT TCCGTTGGAG CAATGTTGCG TGCGTTACAT TGATAATTTC 
    AGTTCAGGCC ATAGAGGAGC TACTTCTACT GAATATTTTA TCAAGGCTGG ATATGCTGTT 
    ATATTTTTAT ATAGGAGGGG AACCTTCCAG CCATATTGCC GATCTCTTCC TGAGGATTCA 
    TTACTTGAAT GTTTTGAGTG CTCTGATGAC TCTGCTATTC AAGTGCGTCA ACCATATACT 
    GAAGCAGTGA AGAGAGCCAT TAGTGATCAT CATGCTGCTG TAGCTGGAGG TCACCTGTTA 
    AAAATTCCAT TTACAACCAT ATTTGAGTAT CTTCAGATAT TACGAAGCAT AGCAATGTCA 
    ATGAGGGATC TTGGATCACA TGCTGTGTAT TATCTTGCTG CTGCTGTGTC TGACTTTTAT 
    GTTCCATGGA AGAGCATGGC GGAGCACAAG ATCCAGTCAG CATCTGGCCC TCTGGACATG 
    CGACTGGTGC AGGTCCCAAA AATGCTCTCA GCGCTGAAGA AAGCATGGGC CCCCATGGCC 
    TTCTGCATAT CATTCAAGCT TGAGACAGAT TCGAAGATTC TTTTGGAGAA AGCTGAAATG 
    GCTCTTAAAA AGCACAGGAT GCATATGGTT GTTGCAAATG AACTTTCGAC CCGCAAAGAG 
    GAGGTAACAG TCGTCACTGG TAATGAAAAG ATTCTTGTAT GCCGCGACAA GACGCAGTCT 
    GATTCTGATG TGGAAGAACC GCTCATCGAA CTAATTGTGG GCAGGCATTC AGCTTATGTT 
    AAGGATTCTG ATTTGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307404.2
    CDS1..978
    Translation

    Target ORF information:

    RefSeq Version XM_002307368.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa DNA/panthothenate metabolism flavoprotein (POPTR_0005s16390g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307368.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGGCAAG AAACTAACTC ATTTACTGGT GTTTAATCAG 
    GTGTTGGCTG TTTTGATCAT TCCGTTGGAG CAATGTTGCG TGCGTTACAT TGATAATTTC 
    AGTTCAGGCC ATAGAGGAGC TACTTCTACT GAATATTTTA TCAAGGCTGG ATATGCTGTT 
    ATATTTTTAT ATAGGAGGGG AACCTTCCAG CCATATTGCC GATCTCTTCC TGAGGATTCA 
    TTACTTGAAT GTTTTGAGTG CTCTGATGAC TCTGCTATTC AAGTGCGTCA ACCATATACT 
    GAAGCAGTGA AGAGAGCCAT TAGTGATCAT CATGCTGCTG TAGCTGGAGG TCACCTGTTA 
    AAAATTCCAT TTACAACCAT ATTTGAGTAT CTTCAGATAT TACGAAGCAT AGCAATGTCA 
    ATGAGGGATC TTGGATCACA TGCTGTGTAT TATCTTGCTG CTGCTGTGTC TGACTTTTAT 
    GTTCCATGGA AGAGCATGGC GGAGCACAAG ATCCAGTCAG CATCTGGCCC TCTGGACATG 
    CGACTGGTGC AGGTCCCAAA AATGCTCTCA GCGCTGAAGA AAGCATGGGC CCCCATGGCC 
    TTCTGCATAT CATTCAAGCT TGAGACAGAT TCGAAGATTC TTTTGGAGAA AGCTGAAATG 
    GCTCTTAAAA AGCACAGGAT GCATATGGTT GTTGCAAATG AACTTTCGAC CCGCAAAGAG 
    GAGGTAACAG TCGTCACTGG TAATGAAAAG ATTCTTGTAT GCCGCGACAA GACGCAGTCT 
    GATTCTGATG TGGAAGAACC GCTCATCGAA CTAATTGTGG GCAGGCATTC AGCTTATGTT 
    AAGGATTCTG ATTTGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7469116 ( XM_024601954.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024457722.1 Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa430366
    Clone ID Related Accession (Same CDS sequence) XM_024601954.1 , XM_024601955.1
    Accession Version XM_024601954.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 975bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product phosphopantothenate--cysteine ligase 2 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGGAAAA GGGAGTCCTA CGGGGGTTGT GTGTGTGACA 
    TCTGGTGGCA CCACAGTTCC GTTGGAGCAA TGTTGCGTGC GTTACATTGA TAATTTCAGT 
    TCAGGCCATA GAGGAGCTAC TTCTACTGAA TATTTTATCA AGGCTGGATA TGCTGTTATA 
    TTTTTATATA GGAGGGGAAC CTTCCAGCCA TATTGCCGAT CTCTTCCTGA GGATTCATTA 
    CTTGAATGTT TTGAGTGCTC TGATGACTCT GCTATTCAAG TGCGTCAACC ATATACTGAA 
    GCAGTGAAGA GAGCCATTAG TGATCATCAT GCTGCTGTAG CTGGAGGTCA CCTGTTAAAA 
    ATTCCATTTA CAACCATATT TGAGTATCTT CAGATATTAC GAAGCATAGC AATGTCAATG 
    AGGGATCTTG GATCACATGC TGTGTATTAT CTTGCTGCTG CTGTGTCTGA CTTTTATGTT 
    CCATGGAAGA GCATGGCGGA GCACAAGATC CAGTCAGCAT CTGGCCCTCT GGACATGCGA 
    CTGGTGCAGG TCCCAAAAAT GCTCTCAGCG CTGAAGAAAG CATGGGCCCC CATGGCCTTC 
    TGCATATCAT TCAAGCTTGA GACAGATTCG AAGATTCTTT TGGAGAAAGC TGAAATGGCT 
    CTTAAAAAGC ACAGGATGCA TATGGTTGTT GCAAATGAAC TTTCGACCCG CAAAGAGGAG 
    GTAACAGTCG TCACTGGTAA TGAAAAGATT CTTGTATGCC GCGACAAGAC GCAGTCTGAT 
    TCTGATGTGG AAGAACCGCT CATCGAACTA ATCGTGGGCA GGCATTCAGC TTATGTTAAG 
    GATTCTGATT TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457722.1
    CDS285..1259
    Translation

    Target ORF information:

    RefSeq Version XM_024601954.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601954.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGGAAAA GGGAGTCCTA CGGGGGTTGT GTGTGTGACA 
    TCTGGTGGCA CCACAGTTCC GTTGGAGCAA TGTTGCGTGC GTTACATTGA TAATTTCAGT 
    TCAGGCCATA GAGGAGCTAC TTCTACTGAA TATTTTATCA AGGCTGGATA TGCTGTTATA 
    TTTTTATATA GGAGGGGAAC CTTCCAGCCA TATTGCCGAT CTCTTCCTGA GGATTCATTA 
    CTTGAATGTT TTGAGTGCTC TGATGACTCT GCTATTCAAG TGCGTCAACC ATATACTGAA 
    GCAGTGAAGA GAGCCATTAG TGATCATCAT GCTGCTGTAG CTGGAGGTCA CCTGTTAAAA 
    ATTCCATTTA CAACCATATT TGAGTATCTT CAGATATTAC GAAGCATAGC AATGTCAATG 
    AGGGATCTTG GATCACATGC TGTGTATTAT CTTGCTGCTG CTGTGTCTGA CTTTTATGTT 
    CCATGGAAGA GCATGGCGGA GCACAAGATC CAGTCAGCAT CTGGCCCTCT GGACATGCGA 
    CTGGTGCAGG TCCCAAAAAT GCTCTCAGCG CTGAAGAAAG CATGGGCCCC CATGGCCTTC 
    TGCATATCAT TCAAGCTTGA GACAGATTCG AAGATTCTTT TGGAGAAAGC TGAAATGGCT 
    CTTAAAAAGC ACAGGATGCA TATGGTTGTT GCAAATGAAC TTTCGACCCG CAAAGAGGAG 
    GTAACAGTCG TCACTGGTAA TGAAAAGATT CTTGTATGCC GCGACAAGAC GCAGTCTGAT 
    TCTGATGTGG AAGAACCGCT CATCGAACTA ATCGTGGGCA GGCATTCAGC TTATGTTAAG 
    GATTCTGATT TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7469116 ( XM_024601955.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024457723.1 Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa430366
    Clone ID Related Accession (Same CDS sequence) XM_024601954.1 , XM_024601955.1
    Accession Version XM_024601955.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 975bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product phosphopantothenate--cysteine ligase 2 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGGAAAA GGGAGTCCTA CGGGGGTTGT GTGTGTGACA 
    TCTGGTGGCA CCACAGTTCC GTTGGAGCAA TGTTGCGTGC GTTACATTGA TAATTTCAGT 
    TCAGGCCATA GAGGAGCTAC TTCTACTGAA TATTTTATCA AGGCTGGATA TGCTGTTATA 
    TTTTTATATA GGAGGGGAAC CTTCCAGCCA TATTGCCGAT CTCTTCCTGA GGATTCATTA 
    CTTGAATGTT TTGAGTGCTC TGATGACTCT GCTATTCAAG TGCGTCAACC ATATACTGAA 
    GCAGTGAAGA GAGCCATTAG TGATCATCAT GCTGCTGTAG CTGGAGGTCA CCTGTTAAAA 
    ATTCCATTTA CAACCATATT TGAGTATCTT CAGATATTAC GAAGCATAGC AATGTCAATG 
    AGGGATCTTG GATCACATGC TGTGTATTAT CTTGCTGCTG CTGTGTCTGA CTTTTATGTT 
    CCATGGAAGA GCATGGCGGA GCACAAGATC CAGTCAGCAT CTGGCCCTCT GGACATGCGA 
    CTGGTGCAGG TCCCAAAAAT GCTCTCAGCG CTGAAGAAAG CATGGGCCCC CATGGCCTTC 
    TGCATATCAT TCAAGCTTGA GACAGATTCG AAGATTCTTT TGGAGAAAGC TGAAATGGCT 
    CTTAAAAAGC ACAGGATGCA TATGGTTGTT GCAAATGAAC TTTCGACCCG CAAAGAGGAG 
    GTAACAGTCG TCACTGGTAA TGAAAAGATT CTTGTATGCC GCGACAAGAC GCAGTCTGAT 
    TCTGATGTGG AAGAACCGCT CATCGAACTA ATCGTGGGCA GGCATTCAGC TTATGTTAAG 
    GATTCTGATT TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457723.1
    CDS287..1261
    Translation

    Target ORF information:

    RefSeq Version XM_024601955.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601955.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGGAAAA GGGAGTCCTA CGGGGGTTGT GTGTGTGACA 
    TCTGGTGGCA CCACAGTTCC GTTGGAGCAA TGTTGCGTGC GTTACATTGA TAATTTCAGT 
    TCAGGCCATA GAGGAGCTAC TTCTACTGAA TATTTTATCA AGGCTGGATA TGCTGTTATA 
    TTTTTATATA GGAGGGGAAC CTTCCAGCCA TATTGCCGAT CTCTTCCTGA GGATTCATTA 
    CTTGAATGTT TTGAGTGCTC TGATGACTCT GCTATTCAAG TGCGTCAACC ATATACTGAA 
    GCAGTGAAGA GAGCCATTAG TGATCATCAT GCTGCTGTAG CTGGAGGTCA CCTGTTAAAA 
    ATTCCATTTA CAACCATATT TGAGTATCTT CAGATATTAC GAAGCATAGC AATGTCAATG 
    AGGGATCTTG GATCACATGC TGTGTATTAT CTTGCTGCTG CTGTGTCTGA CTTTTATGTT 
    CCATGGAAGA GCATGGCGGA GCACAAGATC CAGTCAGCAT CTGGCCCTCT GGACATGCGA 
    CTGGTGCAGG TCCCAAAAAT GCTCTCAGCG CTGAAGAAAG CATGGGCCCC CATGGCCTTC 
    TGCATATCAT TCAAGCTTGA GACAGATTCG AAGATTCTTT TGGAGAAAGC TGAAATGGCT 
    CTTAAAAAGC ACAGGATGCA TATGGTTGTT GCAAATGAAC TTTCGACCCG CAAAGAGGAG 
    GTAACAGTCG TCACTGGTAA TGAAAAGATT CTTGTATGCC GCGACAAGAC GCAGTCTGAT 
    TCTGATGTGG AAGAACCGCT CATCGAACTA ATCGTGGGCA GGCATTCAGC TTATGTTAAG 
    GATTCTGATT TGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7469116 ( XM_024601957.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024457725.1 Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X3, mRNA.
    Price & Availability↑
    CloneID OPa430367
    Clone ID Related Accession (Same CDS sequence) XM_024601957.1
    Accession Version XM_024601957.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 924bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product phosphopantothenate--cysteine ligase 2 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGTTCCG TTGGAGCAAT GTTGCGTGCG TTACATTGAT 
    AATTTCAGTT CAGGCCATAG AGGAGCTACT TCTACTGAAT ATTTTATCAA GGCTGGATAT 
    GCTGTTATAT TTTTATATAG GAGGGGAACC TTCCAGCCAT ATTGCCGATC TCTTCCTGAG 
    GATTCATTAC TTGAATGTTT TGAGTGCTCT GATGACTCTG CTATTCAAGT GCGTCAACCA 
    TATACTGAAG CAGTGAAGAG AGCCATTAGT GATCATCATG CTGCTGTAGC TGGAGGTCAC 
    CTGTTAAAAA TTCCATTTAC AACCATATTT GAGTATCTTC AGATATTACG AAGCATAGCA 
    ATGTCAATGA GGGATCTTGG ATCACATGCT GTGTATTATC TTGCTGCTGC TGTGTCTGAC 
    TTTTATGTTC CATGGAAGAG CATGGCGGAG CACAAGATCC AGTCAGCATC TGGCCCTCTG 
    GACATGCGAC TGGTGCAGGT CCCAAAAATG CTCTCAGCGC TGAAGAAAGC ATGGGCCCCC 
    ATGGCCTTCT GCATATCATT CAAGCTTGAG ACAGATTCGA AGATTCTTTT GGAGAAAGCT 
    GAAATGGCTC TTAAAAAGCA CAGGATGCAT ATGGTTGTTG CAAATGAACT TTCGACCCGC 
    AAAGAGGAGG TAACAGTCGT CACTGGTAAT GAAAAGATTC TTGTATGCCG CGACAAGACG 
    CAGTCTGATT CTGATGTGGA AGAACCGCTC ATCGAACTAA TCGTGGGCAG GCATTCAGCT 
    TATGTTAAGG ATTCTGATTT GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457725.1
    CDS287..1210
    Translation

    Target ORF information:

    RefSeq Version XM_024601957.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa phosphopantothenate--cysteine ligase 2 (LOC7469116), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601957.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGATTCTA GAAATGGTTC AGTATCAGAA ACTCCATTGG ATGCTGAAAT CGGATCATTT 
    TTTGATTCAG CTCCTCCTCT AAAAGACTGT GATGGGATTG CCAAGAAATT GAAGGATTTC 
    ATTGAATTCA ATTCTCCGCC ACCAGTTCCG TTGGAGCAAT GTTGCGTGCG TTACATTGAT 
    AATTTCAGTT CAGGCCATAG AGGAGCTACT TCTACTGAAT ATTTTATCAA GGCTGGATAT 
    GCTGTTATAT TTTTATATAG GAGGGGAACC TTCCAGCCAT ATTGCCGATC TCTTCCTGAG 
    GATTCATTAC TTGAATGTTT TGAGTGCTCT GATGACTCTG CTATTCAAGT GCGTCAACCA 
    TATACTGAAG CAGTGAAGAG AGCCATTAGT GATCATCATG CTGCTGTAGC TGGAGGTCAC 
    CTGTTAAAAA TTCCATTTAC AACCATATTT GAGTATCTTC AGATATTACG AAGCATAGCA 
    ATGTCAATGA GGGATCTTGG ATCACATGCT GTGTATTATC TTGCTGCTGC TGTGTCTGAC 
    TTTTATGTTC CATGGAAGAG CATGGCGGAG CACAAGATCC AGTCAGCATC TGGCCCTCTG 
    GACATGCGAC TGGTGCAGGT CCCAAAAATG CTCTCAGCGC TGAAGAAAGC ATGGGCCCCC 
    ATGGCCTTCT GCATATCATT CAAGCTTGAG ACAGATTCGA AGATTCTTTT GGAGAAAGCT 
    GAAATGGCTC TTAAAAAGCA CAGGATGCAT ATGGTTGTTG CAAATGAACT TTCGACCCGC 
    AAAGAGGAGG TAACAGTCGT CACTGGTAAT GAAAAGATTC TTGTATGCCG CGACAAGACG 
    CAGTCTGATT CTGATGTGGA AGAACCGCTC ATCGAACTAA TCGTGGGCAG GCATTCAGCT 
    TATGTTAAGG ATTCTGATTT GTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
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