ORF » Species Summary » Populus trichocarpa » POPTR_0007s04570g cDNA ORF clone

POPTR_0007s04570g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0007s04570g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0007s04570g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa17270 XM_002309898.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0007s04570g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa433084 XM_002309898.3
Latest version!		 Populus trichocarpa farnesylcysteine lyase (LOC7466760), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0007s04570g ( XM_002309898.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002309934.2 Populus trichocarpa hypothetical protein (POPTR_0007s04570g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa17270
    Clone ID Related Accession (Same CDS sequence) XM_002309898.2
    Accession Version XM_002309898.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1536bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008473). On Dec 16, 2013 this sequence version replaced XM_002309898.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTGAAA AAATAAGAAA AGAAGAAATG GTTATGTTGC CACTAAAAAT TATCTTCTTA 
    CTCGCGATCT TCGGCGGCCT CACATTCCCA CACACCTCCT TCTCCGCCAC CACGTCAGCC 
    GGAGGCGACG ATGCTACCGT ATGCATCATC GGCAGCGGAA TTGGCGGCTC TTCAGTCGCC 
    CACTTCCTCC GCCAATACTC CACCAGCCAC CATCCGAAAA TCCTAATCTT CGAAAGACAC 
    GCCATCGTCG GCGGCCGGAT GGCCACCGTT ACAATCGGCG GCGACGCCTT CGAGGCCGGA 
    GCTTCAATTC TCCACCCCAA AAACTACCAC GCCTCGAACT ATACTAATTT GCTAAATTTG 
    ACGGGGAAGA GACCATCCAG TTCAGACAGT TCAATTTCAT TGGGGATTTG GGATGGCAAT 
    GGGTTTGTTG TTAAAACCCT AAATGTGAAT TCAAATTGGG GGATTGTAAA CAAGATTGTG 
    TCTTTTTTTA ATGGGATTTA TTTGTTTATG AGATATGGTT TTTCACTTGT AAAAATGGAA 
    GGGTTTGTTG ATGAGACAGT GAATAAGTTT TTGAAGTATT ATGAAGGAGT GGAAACAAGG 
    CCTGTGTTTG AGAGTGTTGA GGAGATGTTG AAGTGGGCTG GTTTGTTTAA TCTTACAGGA 
    AAGAGTTTGA AGGAGGAGCT GGTTGATGGT GTTAAATTGG CTCCTTTGTT GATTAAAGAA 
    TTGGTCACTG TCATTACACG AATTAATTAT GGTCAAAGTG TCAACATCAG TGGACTTGCC 
    GGAGCGGTTT CCTTGGCAGG ATCTGGTGGT GGTTTATGGG CTGTTGAAGG AGGGAACTGG 
    CAGATGGCTG CTGGACTAAT TAATAGTTCA GATGTTGAAC TGTATCTCCA TGAAGAAATT 
    GATTCCATCT CTTATCTTGG AGAATATTAT GAGCTCAACT CCACAAAAGG AAATGCATAC 
    TCATGTGAAG TCGCAGTGGT TGCTACACCA CTAGATGAAT CGAGTATTCA ATTTTCACCT 
    CCAGTTTCAG TTCCTGTGAG GCAATTACAG CACACACATG CAACTTTTGT GAGGGGCCTC 
    GTAAATCCTG TATATTTTGG CCTGAAAGCT GTTTCAGAGA TTCCAGAACT GGTGGCCACA 
    ATAGAGGACC CTCGTCTTCC TTTCACAAGC ATTTCAATTC TCAAGTGTTA TAATGAGACA 
    GATATGACAT ACAAAATATT CTCTCGTCAA GCAATGACTG ATGCATTACT GGATAGCATC 
    TTTAGTGTGA GGAAGGAGAC CGTTCGAATA AACTGGGGCG CTTACCCTCA TTACAAGGCT 
    CCTGAAAGAT TCGCACCCTT TATTTTGGAT GGTAAGCATT TGTACTATGT GAACGCTTTT 
    GAGAATGCAG CCAGCACCAT GGAGACTAGT GCTGTTGCAG CTGAAAATAT AGCTCGACTC 
    ATCCTGTCAA GATTTTTTGG CAAGGATTCC TCTTGTCCGT CAGATTTAAA GAGAACCTCC 
    TGTTCAAGTG CAGAGGCGTT GCATTCAGAT ATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002309934.2
    CDS16..1551
    Translation

    Target ORF information:

    RefSeq Version XM_002309898.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0007s04570g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002309898.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTGAAA AAATAAGAAA AGAAGAAATG GTTATGTTGC CACTAAAAAT TATCTTCTTA 
    CTCGCGATCT TCGGCGGCCT CACATTCCCA CACACCTCCT TCTCCGCCAC CACGTCAGCC 
    GGAGGCGACG ATGCTACCGT ATGCATCATC GGCAGCGGAA TTGGCGGCTC TTCAGTCGCC 
    CACTTCCTCC GCCAATACTC CACCAGCCAC CATCCGAAAA TCCTAATCTT CGAAAGACAC 
    GCCATCGTCG GCGGCCGGAT GGCCACCGTT ACAATCGGCG GCGACGCCTT CGAGGCCGGA 
    GCTTCAATTC TCCACCCCAA AAACTACCAC GCCTCGAACT ATACTAATTT GCTAAATTTG 
    ACGGGGAAGA GACCATCCAG TTCAGACAGT TCAATTTCAT TGGGGATTTG GGATGGCAAT 
    GGGTTTGTTG TTAAAACCCT AAATGTGAAT TCAAATTGGG GGATTGTAAA CAAGATTGTG 
    TCTTTTTTTA ATGGGATTTA TTTGTTTATG AGATATGGTT TTTCACTTGT AAAAATGGAA 
    GGGTTTGTTG ATGAGACAGT GAATAAGTTT TTGAAGTATT ATGAAGGAGT GGAAACAAGG 
    CCTGTGTTTG AGAGTGTTGA GGAGATGTTG AAGTGGGCTG GTTTGTTTAA TCTTACAGGA 
    AAGAGTTTGA AGGAGGAGCT GGTTGATGGT GTTAAATTGG CTCCTTTGTT GATTAAAGAA 
    TTGGTCACTG TCATTACACG AATTAATTAT GGTCAAAGTG TCAACATCAG TGGACTTGCC 
    GGAGCGGTTT CCTTGGCAGG ATCTGGTGGT GGTTTATGGG CTGTTGAAGG AGGGAACTGG 
    CAGATGGCTG CTGGACTAAT TAATAGTTCA GATGTTGAAC TGTATCTCCA TGAAGAAATT 
    GATTCCATCT CTTATCTTGG AGAATATTAT GAGCTCAACT CCACAAAAGG AAATGCATAC 
    TCATGTGAAG TCGCAGTGGT TGCTACACCA CTAGATGAAT CGAGTATTCA ATTTTCACCT 
    CCAGTTTCAG TTCCTGTGAG GCAATTACAG CACACACATG CAACTTTTGT GAGGGGCCTC 
    GTAAATCCTG TATATTTTGG CCTGAAAGCT GTTTCAGAGA TTCCAGAACT GGTGGCCACA 
    ATAGAGGACC CTCGTCTTCC TTTCACAAGC ATTTCAATTC TCAAGTGTTA TAATGAGACA 
    GATATGACAT ACAAAATATT CTCTCGTCAA GCAATGACTG ATGCATTACT GGATAGCATC 
    TTTAGTGTGA GGAAGGAGAC CGTTCGAATA AACTGGGGCG CTTACCCTCA TTACAAGGCT 
    CCTGAAAGAT TCGCACCCTT TATTTTGGAT GGTAAGCATT TGTACTATGT GAACGCTTTT 
    GAGAATGCAG CCAGCACCAT GGAGACTAGT GCTGTTGCAG CTGAAAATAT AGCTCGACTC 
    ATCCTGTCAA GATTTTTTGG CAAGGATTCC TCTTGTCCGT CAGATTTAAA GAGAACCTCC 
    TGTTCAAGTG CAGAGGCGTT GCATTCAGAT ATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0007s04570g ( XM_002309898.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002309934.3 Populus trichocarpa farnesylcysteine lyase (LOC7466760), mRNA.
    Price & Availability↑
    CloneID OPa433084
    Clone ID Related Accession (Same CDS sequence) XM_002309898.3
    Accession Version XM_002309898.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1536bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product farnesylcysteine lyase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037291.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002309898.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTGAAA AAATAAGAAA AGAAGAAATG GTTATGTTGC CACTAAAAAT TATCTTCTTA 
    CTCGCGATCT TCGGCGGCCT CACATTCCCA CACACCTCCT TCTCCGCCAC CACGTCAGCC 
    GGAGGCGACG ATGCTACCGT ATGCATCATC GGCAGCGGAA TTGGCGGCTC TTCAGTCGCC 
    CACTTCCTCC GCCAATACAC CACGAGCCAC CATCCGAAAA TCCTAATCTT CGAAAGACAC 
    GCCATCGTCG GCGGCCGGAT GGCCACCGTT ACAATCGGCG GCGACGCCTT CGAGGCCGGA 
    GCTTCAATTC TCCACCCCAA AAACTACCAC GCCTCGAACT ATACTAATTT GCTAAATTTG 
    ACGGGGAAGA GACCATCCAG TTCAGAGAGT TCAATTTCAT TGGGGATTTG GGATGGCAAT 
    GGGTTTGTTG TTAAAACCCT AAATGTGAAT TCAAATTGGG GGATTGTGAA CAAGATTGTG 
    TCTTTTTTTA ATGGGATTTA TTTGTTTATG AGATATGGTT TTTCACTTGT AAAAATGGAA 
    GGGTTTGTTG ATGAGACAGT GAATAAGTTT TTGAAGTATT ATGAAGGAGT GGAAACAAGG 
    CCTGTGTTTG AGAGTGTTGA GGAGATGTTG AAGTGGGCTG GTTTGTTTAA TCTTACAGGA 
    AAGAGTTTGA AGGAGGAGCT GGTTGATGGT GTTAAATTGG CTCCTTTGTT GATTAAAGAA 
    TTGGTCACTG TCATTACACG AATTAATTAT GGTCAAAGTG TCAACATCAG TGGACTTGCC 
    GGAGCGGTTT CCTTGGCAGG ATCTGGTGGT GGTTTATGGG CTGTTGAAGG AGGGAACTGG 
    CAGATGGCTG CTGGACTAAT TAATAGTTCA GATGTTGAAC TGTATCTCCA TGAAGAAATT 
    GATTCCATCT CTTATCTTGG AGAATATTAT GAGCTCAACT CCACAAAAGG AAATGCATAC 
    TCATGTGAAG TCGCAGTGGT TGCTACACCA CTAGATGAAT CGAGTATTCA ATTTTCACCT 
    CCAGTTTCAG TTCCTGTGAG GCAATTACAG CACACACATG CAACTTTTGT GAGGGGCCTC 
    GTAAATCCTG TATATTTTGG CCTGAAAGCT GTTTCAGAGA TTCCAGAACT GGTGGCCACA 
    ATAGAGGACC CTCGTCTTCC TTTCACAAGC ATTTCAATTC TCAAGTGTTA TAATGAGACA 
    GATATGACAT ACAAAATATT CTCTCGTCAA GCAATGACTG ATGCATTACT GGATAGCATC 
    TTTAGTGTGA GGAAGGAGAC CGTTCGAATA AACTGGGGCG CTTACCCTCA TTACAAGGCT 
    CCTGAAAGAT TCGCACCCTT TATTTTGGAT GGTAAGCATT TGTACTATGT GAACGCTTTT 
    GAGAATGCAG CCAGCACCAT GGAGACTAGT GCTGTTGCAG CTGAAAATAT AGCTCGACTC 
    ATCCTGTCAA GATTTTTTGG CAAGGATTCC TCTTGTCCGT CAGATTTAAA GAGAACCTCC 
    TGTTCAAGTG CAGAGGCGTT GCATTCAGAT ATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002309934.3
    CDS32..1567
    Translation

    Target ORF information:

    RefSeq Version XM_002309898.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa farnesylcysteine lyase (LOC7466760), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002309898.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGTTGAAA AAATAAGAAA AGAAGAAATG GTTATGTTGC CACTAAAAAT TATCTTCTTA 
    CTCGCGATCT TCGGCGGCCT CACATTCCCA CACACCTCCT TCTCCGCCAC CACGTCAGCC 
    GGAGGCGACG ATGCTACCGT ATGCATCATC GGCAGCGGAA TTGGCGGCTC TTCAGTCGCC 
    CACTTCCTCC GCCAATACAC CACGAGCCAC CATCCGAAAA TCCTAATCTT CGAAAGACAC 
    GCCATCGTCG GCGGCCGGAT GGCCACCGTT ACAATCGGCG GCGACGCCTT CGAGGCCGGA 
    GCTTCAATTC TCCACCCCAA AAACTACCAC GCCTCGAACT ATACTAATTT GCTAAATTTG 
    ACGGGGAAGA GACCATCCAG TTCAGAGAGT TCAATTTCAT TGGGGATTTG GGATGGCAAT 
    GGGTTTGTTG TTAAAACCCT AAATGTGAAT TCAAATTGGG GGATTGTGAA CAAGATTGTG 
    TCTTTTTTTA ATGGGATTTA TTTGTTTATG AGATATGGTT TTTCACTTGT AAAAATGGAA 
    GGGTTTGTTG ATGAGACAGT GAATAAGTTT TTGAAGTATT ATGAAGGAGT GGAAACAAGG 
    CCTGTGTTTG AGAGTGTTGA GGAGATGTTG AAGTGGGCTG GTTTGTTTAA TCTTACAGGA 
    AAGAGTTTGA AGGAGGAGCT GGTTGATGGT GTTAAATTGG CTCCTTTGTT GATTAAAGAA 
    TTGGTCACTG TCATTACACG AATTAATTAT GGTCAAAGTG TCAACATCAG TGGACTTGCC 
    GGAGCGGTTT CCTTGGCAGG ATCTGGTGGT GGTTTATGGG CTGTTGAAGG AGGGAACTGG 
    CAGATGGCTG CTGGACTAAT TAATAGTTCA GATGTTGAAC TGTATCTCCA TGAAGAAATT 
    GATTCCATCT CTTATCTTGG AGAATATTAT GAGCTCAACT CCACAAAAGG AAATGCATAC 
    TCATGTGAAG TCGCAGTGGT TGCTACACCA CTAGATGAAT CGAGTATTCA ATTTTCACCT 
    CCAGTTTCAG TTCCTGTGAG GCAATTACAG CACACACATG CAACTTTTGT GAGGGGCCTC 
    GTAAATCCTG TATATTTTGG CCTGAAAGCT GTTTCAGAGA TTCCAGAACT GGTGGCCACA 
    ATAGAGGACC CTCGTCTTCC TTTCACAAGC ATTTCAATTC TCAAGTGTTA TAATGAGACA 
    GATATGACAT ACAAAATATT CTCTCGTCAA GCAATGACTG ATGCATTACT GGATAGCATC 
    TTTAGTGTGA GGAAGGAGAC CGTTCGAATA AACTGGGGCG CTTACCCTCA TTACAAGGCT 
    CCTGAAAGAT TCGCACCCTT TATTTTGGAT GGTAAGCATT TGTACTATGT GAACGCTTTT 
    GAGAATGCAG CCAGCACCAT GGAGACTAGT GCTGTTGCAG CTGAAAATAT AGCTCGACTC 
    ATCCTGTCAA GATTTTTTGG CAAGGATTCC TCTTGTCCGT CAGATTTAAA GAGAACCTCC 
    TGTTCAAGTG CAGAGGCGTT GCATTCAGAT ATGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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