ORF » Species Summary » Populus trichocarpa » POPTR_0014s175702g cDNA ORF clone

POPTR_0014s175702g cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following POPTR_0014s175702g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0014s175702g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa442694 XM_024584524.1
Latest version!		 Populus trichocarpa poly(A)-specific ribonuclease PARN-like (LOC7464439), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0014s175702g ( XM_024584524.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024440292.1 Populus trichocarpa poly(A)-specific ribonuclease PARN-like (LOC7464439), mRNA.
    Price & Availability↑
    CloneID OPa442694
    Clone ID Related Accession (Same CDS sequence) XM_024584524.1
    Accession Version XM_024584524.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1881bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product poly(A)-specific ribonuclease PARN-like
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037298.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGGTTGCCG TCTCCCCGCT GCTGCAAAGG CGCCTGTTAA GCACCAGCGT GACTAGAACC 
    CACCATAAAC CTCAACAGCA ATGGAGCGTA AAGCAAGTCA CAAAATCAAA CTTCGCTGAC 
    ACTCTTGAGG ACATAAAATC CCATGTCTCC AATTCCGATT TTGTGGCCGT GTCCTTGCAA 
    AACACCGGCT TCTTCTCCGC CCCTTGGCAA CGCGTCTCCC CTTTTGACAC CGCCGACACG 
    GCTTACTTAA AAGCCAAGTA TGCCGCTGAA AGGTTCCAGG TTCTTCATTT CGCTGTTTGC 
    CCCTTCACTG TCAGGGCTTC TAAAGTCACT GCCTACCCAT ATAATTTTCA CTTGTTCCCA 
    AGAGCTGAAC TAAAGATGGA AATGCCTTCT TACAGTTTTT ATTGTCAAAC CTCGTCTTTG 
    ATATCTATGG CTCGCCAAGG TTTTGACTTT AATTCTTGCA TAAATGATGG TATCTCATAC 
    TTGTCCAGAG AACAAGAATC TGCTGCAAAA ATTCAGATGG GGAATCCAAT ACTTGCAAAG 
    AATGTGACAG AATCCACTTC TACCCTTTCT GTTGCTGATT CTGTATTCGT TGAAAGGATT 
    AAATCACACA TTAAAAATTG GAAGAAAGCA TGTAAAGAAA CTAGCACAAG GAAAGAAGGC 
    AACCAAATTC AAGATGCTCT GGTCAGATCC CTAAGAAAAC TCGTTCTAGG AAATGAAGAG 
    TATGATTCAA GACCGTGCAT GAATATAGAT GTTTGCAGTG AACGCCAAGC GCAGCTTGTG 
    GTTGAGATGT TGCAAGAATT TGCTGATGAT GTTGTTCCTT TAATAATTCC AGCAAAGGGT 
    GGAGCAATGC AGGCAGTTCG TGTTGTTTTA ACAAGTTCAA AGGAGGATAA AGATCTTCTG 
    CAGGGAAAGC TTCAAAATGA CGAACAGGAA CTAAAGAAAA AGGTCCGTGG CTTTCGAGAG 
    GTGATCGATT TGATATCTGC TTCTCAGAAG CCTGTTGTCT CGCATGGTTC CCTTAATGAT 
    TTAACAGTTA TTCATTCAAA ATTCATAGCT CCCCTGCCTC CTACAGTGGA TGAGTTTATG 
    TGTTCCTTGC GTTTGGCTTT CCCCCTGGTA ATTGATGTCA ACCATCTGAT GAAGGAGATC 
    AGTCCTCTGA GAAAAGTTAC TAGTATACCT GTAGCTATTT CTCAATTAAA GAATCGGTTC 
    TTTACACCCA TTGATATGGA AATTCCATGC CAAGCTATGG AAAATGAAGA CACTATTCAT 
    GGGCAAAATG TTGTGAAGAT TTGTGAATTG TTTGCTAGGC TATGCAGTAT ACTCAAAATC 
    GATCCTGCTG CTGTCAAATC AGATGAAGAA AAAGGGGCTT CAGCCCTTGA AGCTTACGCA 
    AATATTTTCA GTCCATTCTG TACTGCATCT GAAGAACCAA TAGATGGAGA AATCAAAATA 
    TGGACTAACA ACACAAGAAC TGTGAGCTGT GAGGATATGG TTTTCTTGTG GGGATTTGGG 
    GATAGGGTGA CAGCTGGGAT ACTAAAGAGC CTGCTACAAG AGTCTCATGA AGCTTTCTCC 
    AAGGAATTTG ATGTGCGATT GGTAGATAAT AGCTGCGCCA TTGTGATTTT CTGGCAACAT 
    GGGTTGACAG AAACTTTTCT GAATACCATG AATAAGTGCT CAGACATGCG CGGACCTTTG 
    AGGGAGATGG TTTCAGAAGG TCTAAGAGCT GCAGGGTATG AGACTTACAA TAGAGCTTGT 
    AGGTTAGGTT TATGGGAGTC AAGTTTAGCA GATTCCTTAG ACAGAGCCTT GGCTGACTCT 
    GACTGTGCTT CCGAAGCTGA TTCTAAAACG AAGTGTTCAG ATAGGTGCAA TGAGTGGATA 
    ATTAACCTGG ATGATCTCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024440292.1
    CDS77..1957
    Translation

    Target ORF information:

    RefSeq Version XM_024584524.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa poly(A)-specific ribonuclease PARN-like (LOC7464439), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024584524.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGGTTGCCG TCTCCCCGCT GCTGCAAAGG CGCCTGTTAA GCACCAGCGT GACTAGAACC 
    CACCATAAAC CTCAACAGCA ATGGAGCGTA AAGCAAGTCA CAAAATCAAA CTTCGCTGAC 
    ACTCTTGAGG ACATAAAATC CCATGTCTCC AATTCCGATT TTGTGGCCGT GTCCTTGCAA 
    AACACCGGCT TCTTCTCCGC CCCTTGGCAA CGCGTCTCCC CTTTTGACAC CGCCGACACG 
    GCTTACTTAA AAGCCAAGTA TGCCGCTGAA AGGTTCCAGG TTCTTCATTT CGCTGTTTGC 
    CCCTTCACTG TCAGGGCTTC TAAAGTCACT GCCTACCCAT ATAATTTTCA CTTGTTCCCA 
    AGAGCTGAAC TAAAGATGGA AATGCCTTCT TACAGTTTTT ATTGTCAAAC CTCGTCTTTG 
    ATATCTATGG CTCGCCAAGG TTTTGACTTT AATTCTTGCA TAAATGATGG TATCTCATAC 
    TTGTCCAGAG AACAAGAATC TGCTGCAAAA ATTCAGATGG GGAATCCAAT ACTTGCAAAG 
    AATGTGACAG AATCCACTTC TACCCTTTCT GTTGCTGATT CTGTATTCGT TGAAAGGATT 
    AAATCACACA TTAAAAATTG GAAGAAAGCA TGTAAAGAAA CTAGCACAAG GAAAGAAGGC 
    AACCAAATTC AAGATGCTCT GGTCAGATCC CTAAGAAAAC TCGTTCTAGG AAATGAAGAG 
    TATGATTCAA GACCGTGCAT GAATATAGAT GTTTGCAGTG AACGCCAAGC GCAGCTTGTG 
    GTTGAGATGT TGCAAGAATT TGCTGATGAT GTTGTTCCTT TAATAATTCC AGCAAAGGGT 
    GGAGCAATGC AGGCAGTTCG TGTTGTTTTA ACAAGTTCAA AGGAGGATAA AGATCTTCTG 
    CAGGGAAAGC TTCAAAATGA CGAACAGGAA CTAAAGAAAA AGGTCCGTGG CTTTCGAGAG 
    GTGATCGATT TGATATCTGC TTCTCAGAAG CCTGTTGTCT CGCATGGTTC CCTTAATGAT 
    TTAACAGTTA TTCATTCAAA ATTCATAGCT CCCCTGCCTC CTACAGTGGA TGAGTTTATG 
    TGTTCCTTGC GTTTGGCTTT CCCCCTGGTA ATTGATGTCA ACCATCTGAT GAAGGAGATC 
    AGTCCTCTGA GAAAAGTTAC TAGTATACCT GTAGCTATTT CTCAATTAAA GAATCGGTTC 
    TTTACACCCA TTGATATGGA AATTCCATGC CAAGCTATGG AAAATGAAGA CACTATTCAT 
    GGGCAAAATG TTGTGAAGAT TTGTGAATTG TTTGCTAGGC TATGCAGTAT ACTCAAAATC 
    GATCCTGCTG CTGTCAAATC AGATGAAGAA AAAGGGGCTT CAGCCCTTGA AGCTTACGCA 
    AATATTTTCA GTCCATTCTG TACTGCATCT GAAGAACCAA TAGATGGAGA AATCAAAATA 
    TGGACTAACA ACACAAGAAC TGTGAGCTGT GAGGATATGG TTTTCTTGTG GGGATTTGGG 
    GATAGGGTGA CAGCTGGGAT ACTAAAGAGC CTGCTACAAG AGTCTCATGA AGCTTTCTCC 
    AAGGAATTTG ATGTGCGATT GGTAGATAAT AGCTGCGCCA TTGTGATTTT CTGGCAACAT 
    GGGTTGACAG AAACTTTTCT GAATACCATG AATAAGTGCT CAGACATGCG CGGACCTTTG 
    AGGGAGATGG TTTCAGAAGG TCTAAGAGCT GCAGGGTATG AGACTTACAA TAGAGCTTGT 
    AGGTTAGGTT TATGGGAGTC AAGTTTAGCA GATTCCTTAG ACAGAGCCTT GGCTGACTCT 
    GACTGTGCTT CCGAAGCTGA TTCTAAAACG AAGTGTTCAG ATAGGTGCAA TGAGTGGATA 
    ATTAACCTGG ATGATCTCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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