ORF » Species Summary » Populus trichocarpa » LOC7464104 cDNA ORF clone

LOC7464104 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7464104 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7464104 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa32727 XM_002322588.2
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0016s03700g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa445229 XM_002322588.3
Latest version!		 Populus trichocarpa ribosomal RNA small subunit methyltransferase nep-1 (LOC7464104), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7464104 ( XM_002322588.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002322624.2 Populus trichocarpa hypothetical protein (POPTR_0016s03700g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa32727
    Clone ID Related Accession (Same CDS sequence) XM_002322588.2
    Accession Version XM_002322588.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 849bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008482). On Dec 16, 2013 this sequence version replaced XM_002322588.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGGC CTTATGGTAA AGGGCACAAG AGAAAGAAGA AAGGGGAGAG GTATGATAAA 
    GAAGAAGATG AAGTGGAAGA TAAACAAGTT GAAGAAGAGA ACACTGATGA TGAGACTGAA 
    ATAAGCGCAC AAGATGCTGA AGAAAAAACA GAAGAGGAAA GAGAAGAAGT ACCAGAATTG 
    GAGGGCATTC CTGTTGGCCC AAGTACTCAA ACTGCCAAAA AACCTGGGGT CATATTTGTG 
    CTGGAAAAGG CATCTTTGGA AGTTGCAAAA GTTGGAAAGA ATTACCAAAT TTTGAATTCT 
    GAGGAGCATG CCAATTTCCT GAGGAGGAAT AATAAAAATC CTGCTGATTA CAGGCCTGAC 
    ATCATTTATC AGGCTCTCCT ATCCATCTTA GATAGCCCAT TGAATAAGGC TGGGTGTTTG 
    CGAGCTGTAT ATGTGAAAAC AGATAAAGGT GTTCTTTTTG AAGTTAAGCC ATATGTTCGT 
    ATTCCAAGGA CTTATAAGCG TTTTGCTGGT ATTATGTTGC AGCTGCTTCA AAAGCTTAGT 
    ATTGCTGCTG TTGGTAAGCG TGAGAAGCTT TTGCGCGTGA TCAAGAATCC TGTAACCCAG 
    CACCTACCTT TAAACTCTCG TAAAATAGGC TTCTCCCATA GCTCAGACAA ATTTGTCGAA 
    ATGGAGAAGT ATGTAGCCGG AGTTGGTGGT GACACTGACC TTGTTTTCGT GGTTGGTGCT 
    ATGTCCCATG GTAAAATTGA ATGTGATTAT ATAGATGATT TTATATCAGT TTCAGAATAT 
    CCGCTGAGTG CTGCCTGGTG TATTGCAAGG ATATGTGAGG CTGTGTCAAA GAAGTGGCGT 
    GTACTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002322624.2
    CDS110..958
    Translation

    Target ORF information:

    RefSeq Version XM_002322588.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0016s03700g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002322588.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGGC CTTATGGTAA AGGGCACAAG AGAAAGAAGA AAGGGGAGAG GTATGATAAA 
    GAAGAAGATG AAGTGGAAGA TAAACAAGTT GAAGAAGAGA ACACTGATGA TGAGACTGAA 
    ATAAGCGCAC AAGATGCTGA AGAAAAAACA GAAGAGGAAA GAGAAGAAGT ACCAGAATTG 
    GAGGGCATTC CTGTTGGCCC AAGTACTCAA ACTGCCAAAA AACCTGGGGT CATATTTGTG 
    CTGGAAAAGG CATCTTTGGA AGTTGCAAAA GTTGGAAAGA ATTACCAAAT TTTGAATTCT 
    GAGGAGCATG CCAATTTCCT GAGGAGGAAT AATAAAAATC CTGCTGATTA CAGGCCTGAC 
    ATCATTTATC AGGCTCTCCT ATCCATCTTA GATAGCCCAT TGAATAAGGC TGGGTGTTTG 
    CGAGCTGTAT ATGTGAAAAC AGATAAAGGT GTTCTTTTTG AAGTTAAGCC ATATGTTCGT 
    ATTCCAAGGA CTTATAAGCG TTTTGCTGGT ATTATGTTGC AGCTGCTTCA AAAGCTTAGT 
    ATTGCTGCTG TTGGTAAGCG TGAGAAGCTT TTGCGCGTGA TCAAGAATCC TGTAACCCAG 
    CACCTACCTT TAAACTCTCG TAAAATAGGC TTCTCCCATA GCTCAGACAA ATTTGTCGAA 
    ATGGAGAAGT ATGTAGCCGG AGTTGGTGGT GACACTGACC TTGTTTTCGT GGTTGGTGCT 
    ATGTCCCATG GTAAAATTGA ATGTGATTAT ATAGATGATT TTATATCAGT TTCAGAATAT 
    CCGCTGAGTG CTGCCTGGTG TATTGCAAGG ATATGTGAGG CTGTGTCAAA GAAGTGGCGT 
    GTACTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7464104 ( XM_002322588.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002322624.3 Populus trichocarpa ribosomal RNA small subunit methyltransferase nep-1 (LOC7464104), mRNA.
    Price & Availability↑
    CloneID OPa445229
    Clone ID Related Accession (Same CDS sequence) XM_002322588.3
    Accession Version XM_002322588.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 849bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product ribosomal RNA small subunit methyltransferase nep-1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037300.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002322588.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGGC CTTATGGTAA AGGGCACAAG AGAAAGAAGA AAGGGGAGAG GTATGATAAA 
    GAAGAAGATG AAGTGGAAGA TAAACAAGTT GAAGAAGAGA ACACTGATGA TGAGACTGAA 
    ATAAGCGCAC AAGATGCTGA AGAAAAAACA GAAGAGGAAA GAGAAGAACT ACCAGAATTG 
    GAGGGCATTC CTGTTGGCCC AAGTACTCAA ACTGCCAAAA AACCTGGGGT CATATTTGTG 
    CTGGAAAAGG CATCTTTGGA AGTTGCAAAA GTTGGAAAGA ATTACCAAAT TTTGAATTCT 
    GAGGAGCATG CCAATTTCCT GAGGAGGAAT AATAAAAATC CTGCTGATTA CAGGCCTGAC 
    ATCATTTATC AGGCTCTCCT ATCCATCTTA GATAGCCCAT TGAATAAGGC TGGGTGTTTG 
    CGAGCTGTAT ATGTGAAAAC AGATAAAGGT GTTCTTTTTG AAGTTAAGCC ATATGTTCGT 
    ATTCCAAGGA CTTATAAGCG TTTTGCTGGT ATTATGTTGC AGCTGCTTCA AAAGCTTAGT 
    ATTGCTGCTG TTGGTAAGCG TGAGAAGCTT TTGCGCGTGA TCAAGAATCC TGTAACCCAG 
    CACCTACCTT TAAACTCTCG TAAAATAGGC TTCTCCCATA GCTCAGACAA ATTGGTCGAA 
    ATGGAGAAGT ATGTAGCCGG AGTTGGTGGT GACACTGACC TTGTTTTCGT GGTTGGTGCT 
    ATGTCCCATG GTAAAATTGA ATGTGATTAT ATAGATGATT TTATATCAGT TTCAGAATAT 
    CCGCTGAGTG CTGCCTGGTG TATTGCAAGG ATATGTGAGG CTGTGTCAAA GAAGTGGCGT 
    GTACTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002322624.3
    CDS177..1025
    Translation

    Target ORF information:

    RefSeq Version XM_002322588.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa ribosomal RNA small subunit methyltransferase nep-1 (LOC7464104), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002322588.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGGTGAGGC CTTATGGTAA AGGGCACAAG AGAAAGAAGA AAGGGGAGAG GTATGATAAA 
    GAAGAAGATG AAGTGGAAGA TAAACAAGTT GAAGAAGAGA ACACTGATGA TGAGACTGAA 
    ATAAGCGCAC AAGATGCTGA AGAAAAAACA GAAGAGGAAA GAGAAGAACT ACCAGAATTG 
    GAGGGCATTC CTGTTGGCCC AAGTACTCAA ACTGCCAAAA AACCTGGGGT CATATTTGTG 
    CTGGAAAAGG CATCTTTGGA AGTTGCAAAA GTTGGAAAGA ATTACCAAAT TTTGAATTCT 
    GAGGAGCATG CCAATTTCCT GAGGAGGAAT AATAAAAATC CTGCTGATTA CAGGCCTGAC 
    ATCATTTATC AGGCTCTCCT ATCCATCTTA GATAGCCCAT TGAATAAGGC TGGGTGTTTG 
    CGAGCTGTAT ATGTGAAAAC AGATAAAGGT GTTCTTTTTG AAGTTAAGCC ATATGTTCGT 
    ATTCCAAGGA CTTATAAGCG TTTTGCTGGT ATTATGTTGC AGCTGCTTCA AAAGCTTAGT 
    ATTGCTGCTG TTGGTAAGCG TGAGAAGCTT TTGCGCGTGA TCAAGAATCC TGTAACCCAG 
    CACCTACCTT TAAACTCTCG TAAAATAGGC TTCTCCCATA GCTCAGACAA ATTGGTCGAA 
    ATGGAGAAGT ATGTAGCCGG AGTTGGTGGT GACACTGACC TTGTTTTCGT GGTTGGTGCT 
    ATGTCCCATG GTAAAATTGA ATGTGATTAT ATAGATGATT TTATATCAGT TTCAGAATAT 
    CCGCTGAGTG CTGCCTGGTG TATTGCAAGG ATATGTGAGG CTGTGTCAAA GAAGTGGCGT 
    GTACTGTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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