ORF » Species Summary » Populus trichocarpa » LOC7457417 cDNA ORF clone

LOC7457417 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC7457417 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC7457417 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa04711 XM_024595400.1
Latest version!		 Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa04711 XM_024595401.1
Latest version!		 Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa04711 XM_002301392.3
Latest version!		 Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
View Old Accession Versions >>
OPa04711 XM_002301392.2 Populus trichocarpa hypothetical protein (POPTR_0002s17650g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
Hide Old Accession Versions >>

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC7457417 ( XM_024595401.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024451169.1 Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X3, mRNA.
    Price & Availability↑
    CloneID OPa04711
    Clone ID Related Accession (Same CDS sequence) XM_024595401.1 , XM_002301392.2 , XM_002301392.3 , XM_024595400.1
    Accession Version XM_024595401.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1461bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product U4/U6 small nuclear ribonucleoprotein Prp31 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024451169.1
    CDS249..1709
    Translation

    Target ORF information:

    RefSeq Version XM_024595401.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024595401.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7457417 ( XM_002301392.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002301428.1 Populus trichocarpa hypothetical protein (POPTR_0002s17650g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa04711
    Clone ID Related Accession (Same CDS sequence) XM_024595401.1 , XM_002301392.2 , XM_002301392.3 , XM_024595400.1
    Accession Version XM_002301392.2 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1461bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008468). On Dec 16, 2013 this sequence version replaced XM_002301392.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301428.1
    CDS201..1661
    Translation

    Target ORF information:

    RefSeq Version XM_002301392.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0002s17650g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301392.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7457417 ( XM_002301392.3 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_002301428.1 Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa04711
    Clone ID Related Accession (Same CDS sequence) XM_024595401.1 , XM_002301392.2 , XM_002301392.3 , XM_024595400.1
    Accession Version XM_002301392.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1461bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product U4/U6 small nuclear ribonucleoprotein Prp31 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002301392.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002301428.1
    CDS211..1671
    Translation

    Target ORF information:

    RefSeq Version XM_002301392.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002301392.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC7457417 ( XM_024595400.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024451168.1 Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa04711
    Clone ID Related Accession (Same CDS sequence) XM_024595401.1 , XM_002301392.2 , XM_002301392.3 , XM_024595400.1
    Accession Version XM_024595400.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1461bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product U4/U6 small nuclear ribonucleoprotein Prp31 homolog
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037286.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024451168.1
    CDS245..1705
    Translation

    Target ORF information:

    RefSeq Version XM_024595400.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa U4/U6 small nuclear ribonucleoprotein Prp31 homolog (LOC7457417), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024595400.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    ATGGCAACAC TAGCTGATTC TTTCCTTGCT GACCTTGATG AGTTATCCGA CAACGATGCT 
    GATATTGTCG ATGAAGATGA TGATGTAGAG GCAGGAAACA TGGAAGAGGA TGTCGATGGA 
    GACTTGGCAG ACATTGAAGC TCTTAACTAT GATGATTTGG ACAGTGTGTC AAAATTGCAG 
    AAAACACAAC GATTTAATGA TATAATGCAG AAAGTGGAAG ATGCACTTCA GAAGGGCTCA 
    GATGTCCAAG ATCATGGAAT GGTATTGGAA GATGATCCTG AATATCAGCT AATAGTGAAC 
    TGCAATGCAT TGTCAGTTGA CATTGAGAAT GAAATTGTTA TCATCCACAA TTTTATTCGT 
    GACAAGTACC GGCTGAAATT TCCGGAGCTT GAATCACTTG TCCATCACCC AATTGATTAT 
    GCTCGTGTTG TGAAGAAGAT TGGAAATGAG ATGGATTTGA CCCTTGTTGA TATGGAAGGG 
    CTTATACCTG CCGCTATTAG AATGGTGATT TCTGTGACAG CATCCACAAC AAGTGGCAAA 
    CCGCTTCCTG AAGAAGTCCT TCAAAAGACA ATTGACGCTT GTAATCGAGC TCTTGCACTT 
    GATTCAGCAA AGAAGAAGGT CCTTGATTTT GTAGAAACTA GAATGGGTTA CATTGCACCG 
    AATCTTTCTG CTATTGTTGG TAGTGCTGTT GCTGCAAAAC TTATGGGGAT GGCTGGTGGT 
    CTCACAGCCT TAGCCAAGAT GCCTGCCTGC AATGTTCAGC TTCTTGGTGC CAAGAAGAAG 
    AACCTTGCAG GATTTTCTAC TGCAACATCC CAATTCCGTG TTGGTTATAT AGAGCAAACA 
    GAGGTGTTTC AGTCCACACC ACCTTCTTTG AGAATGCGTG CTGGTCGACT ATTGGCCGCA 
    AAATCAACAC TTGCTGCACG AGTAGATTCT ACTAGAGGAG ATCCATCAGG AAACACTGGA 
    AGAACCCTTA GGGAAGAGAT TCACAAGAAA ATAGAGAAGT GGCAAGAGCC TCCTCCTGCA 
    AAGCAACCTA AACCACTTCC AGTTCCTGAT TCTGAACCTA AGAAAAAGAG AGGTGGGCGG 
    CGCCTAAGGA AGATGAAAGA AAGATATGCG ATAACAGACA TGAGGAAGCT GGCCAATAGG 
    ATGCAATTTG GGGTACCTGA AGAGAGTTCT TTGGGTGATG GGCTGGGGGA AGGTTATGGT 
    ATGCTTGGTC AGGCTGGGAA TGGCAAGCTG CGTGTATCAA TTGGCCAGAG CAAACTCGCA 
    GCGAAAGTTG CTAAGAAGTT CAAGGAGAAG AATTATGGAA GCAGTGGTGC TACTTCTGGC 
    CTCACCTCAA GTCTGGCATT TACTCCTGTT CAGGGGATTG AGCTCACAAA TCCACAAGCT 
    CATGCGCACC AACTTGGCAG TGGGACACAA AGCACCTATT TTTCTGAGAA TGGAACCTTT 
    TCAAAGATCA AGAGGACCTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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