ORF » Species Summary » Populus trichocarpa » POPTR_0019s08090g cDNA ORF clone

POPTR_0019s08090g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0019s08090g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0019s08090g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa36610 XM_002325433.2
Latest version!		 Populus trichocarpa putative IPP isomerase family protein (POPTR_0019s08090g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa449046 XM_002325433.3
Latest version!		 Populus trichocarpa isopentenyl-diphosphate Delta-isomerase I (LOC7455211), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0019s08090g ( XM_002325433.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002325469.1 Populus trichocarpa putative IPP isomerase family protein (POPTR_0019s08090g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa36610
    Clone ID Related Accession (Same CDS sequence) XM_002325433.2
    Accession Version XM_002325433.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 705bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product putative IPP isomerase family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008485). On Dec 16, 2013 this sequence version replaced XM_002325433.1. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGGTGACG CTCCTGATGC TGGCATGGAC GCTGTCCAGA GACGCCTTAT GTTCGAGGAC 
    GAATGCATTT TAGTGGATGA GAATGATCGG GTTGTTGGTC ATGACTCCAA GTATAATTGT 
    CATTTGTGGG AAAATATTTT GAAGGGAAAT GCCTTGCATA GAGCTTTTAG TGTGTTTCTC 
    TTCAACTCAA AACATGAGCT ACTCCTTCAG CAACGCTCTG CGACAAAGGT AACATTTCCC 
    CTGGTGTGGA CTAACACTTG CTGCAGCCAT CCTTTATATC GTGAATCTGA GCTTATACAT 
    GAGGATGCCC TTGGGGTGAG GAATGCTGCA CAGAGGAAGC TTTTCGATGA GCTTGGTATT 
    CCTGCTGAAG ATGTGCCAGT TGATCAGTTC AGTCCTCTGG GGCGTATATT GTACAAGGCA 
    CCTTCTGATG GAAAGTGGGG GGAGCATGAA CTTGATTACC TGCTCTTCAT TGTTCGTGAT 
    GTTAGCGTAA ATCCAAACCC TGATGAGGTA GCTGACATCA AGTACGTTAA CCAGGATGAA 
    TTGAAGGAGC TTCTGAGAAA AGCAGATGCT GGCGAGGAAG GTTTGAAGTT GTCACCGTGG 
    TTCAGACTAG TTGTGGACAA CTTCCTGTTC AAGTGGTGGG ACCATGTCGA GAAAGGAACT 
    CTAGAGGAAG CAGCTGACAT GAAAGCGATT CACAAGCTGA CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002325469.1
    CDS121..825
    Translation

    Target ORF information:

    RefSeq Version XM_002325433.2
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa putative IPP isomerase family protein (POPTR_0019s08090g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002325433.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGGGTGACG CTCCTGATGC TGGCATGGAC GCTGTCCAGA GACGCCTTAT GTTCGAGGAC 
    GAATGCATTT TAGTGGATGA GAATGATCGG GTTGTTGGTC ATGACTCCAA GTATAATTGT 
    CATTTGTGGG AAAATATTTT GAAGGGAAAT GCCTTGCATA GAGCTTTTAG TGTGTTTCTC 
    TTCAACTCAA AACATGAGCT ACTCCTTCAG CAACGCTCTG CGACAAAGGT AACATTTCCC 
    CTGGTGTGGA CTAACACTTG CTGCAGCCAT CCTTTATATC GTGAATCTGA GCTTATACAT 
    GAGGATGCCC TTGGGGTGAG GAATGCTGCA CAGAGGAAGC TTTTCGATGA GCTTGGTATT 
    CCTGCTGAAG ATGTGCCAGT TGATCAGTTC AGTCCTCTGG GGCGTATATT GTACAAGGCA 
    CCTTCTGATG GAAAGTGGGG GGAGCATGAA CTTGATTACC TGCTCTTCAT TGTTCGTGAT 
    GTTAGCGTAA ATCCAAACCC TGATGAGGTA GCTGACATCA AGTACGTTAA CCAGGATGAA 
    TTGAAGGAGC TTCTGAGAAA AGCAGATGCT GGCGAGGAAG GTTTGAAGTT GTCACCGTGG 
    TTCAGACTAG TTGTGGACAA CTTCCTGTTC AAGTGGTGGG ACCATGTCGA GAAAGGAACT 
    CTAGAGGAAG CAGCTGACAT GAAAGCGATT CACAAGCTGA CTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0019s08090g ( XM_002325433.3 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002325469.2 Populus trichocarpa isopentenyl-diphosphate Delta-isomerase I (LOC7455211), mRNA.
    Price & Availability↑
    CloneID OPa449046
    Clone ID Related Accession (Same CDS sequence) XM_002325433.3
    Accession Version XM_002325433.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 930bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product isopentenyl-diphosphate Delta-isomerase I
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037303.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_002325433.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGTCTCTGA CCTCTCGCAT TCTATTTACT CCTCCCACCA CCATTAAACT CTCCCCTTCC 
    ATCCCTCCCC CTTCTGCCTT TTGTCCTCTC AAAACCCCTT CCCTCTCTTC CAATTCTCCC 
    CATCCATCCC TCCTCCGCTT CACCCATATT ACAAAGTCGC CGTCCTCTCT ATTCGCGAGG 
    GTCTTTTCGT CCTTCAACCC CACCGCCACC ACCACCCCCC CAACCATGGG TGACGCTCCT 
    GATGCTGGCA TGGACGCTGT CCAGAGACGC CTTATGTTCG AGGACGAATG CATTTTAGTG 
    GATGAGAATG ATCGGGTTGT TGGTCATGAC TCCAAGTATA ATTGTCATTT GTGGGAAAAT 
    ATTTTGAAGG GAAATGCCTT GCATAGAGCT TTTAGTGTGT TTCTCTTCAA CTCAAAACAT 
    GAGCTACTCC TTCAGCAACG CTCTGCGACA AAGGTAACAT TTCCCCTGGT GTGGACTAAC 
    ACTTGCTGCA GCCATCCTTT ATATCGTGAA TCTGAGCTTA TACATGAGGA TGCCCTTGGG 
    GTGAGGAATG CTGCACAGAG GAAGCTTTTC GATGAGCTTG GTATTCCTGC TGAAGATGTG 
    CCAGTTGATC AGTTCAGTCC TCTGGGGCGT ATATTGTACA AGGCACCTTC TGATGGAAAG 
    TGGGGGGAGC ATGAACTTGA TTACCTGCTC TTCATTGTTC GTGATGTTAG CGTAAATCCA 
    AACCCTGATG AGGTAGCTGA CATCAAGTAC GTTAACCAGG ATGAATTGAA GGAGCTTCTG 
    AGAAAAGCAG ATGCTGGCGA GGAAGGTTTG AAGTTGTCAC CGTGGTTCAG ACTAGTTGTG 
    GACAACTTCC TGTTCAAGTG GTGGGACCAT GTCGAGAAAG GAACTCTAGA GGAAGCAGCT 
    GACATGAAAG CGATTCACAA GCTGACTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002325469.2
    CDS59..988
    Translation

    Target ORF information:

    RefSeq Version XM_002325433.3
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa isopentenyl-diphosphate Delta-isomerase I (LOC7455211), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002325433.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGTCTCTGA CCTCTCGCAT TCTATTTACT CCTCCCACCA CCATTAAACT CTCCCCTTCC 
    ATCCCTCCCC CTTCTGCCTT TTGTCCTCTC AAAACCCCTT CCCTCTCTTC CAATTCTCCC 
    CATCCATCCC TCCTCCGCTT CACCCATATT ACAAAGTCGC CGTCCTCTCT ATTCGCGAGG 
    GTCTTTTCGT CCTTCAACCC CACCGCCACC ACCACCCCCC CAACCATGGG TGACGCTCCT 
    GATGCTGGCA TGGACGCTGT CCAGAGACGC CTTATGTTCG AGGACGAATG CATTTTAGTG 
    GATGAGAATG ATCGGGTTGT TGGTCATGAC TCCAAGTATA ATTGTCATTT GTGGGAAAAT 
    ATTTTGAAGG GAAATGCCTT GCATAGAGCT TTTAGTGTGT TTCTCTTCAA CTCAAAACAT 
    GAGCTACTCC TTCAGCAACG CTCTGCGACA AAGGTAACAT TTCCCCTGGT GTGGACTAAC 
    ACTTGCTGCA GCCATCCTTT ATATCGTGAA TCTGAGCTTA TACATGAGGA TGCCCTTGGG 
    GTGAGGAATG CTGCACAGAG GAAGCTTTTC GATGAGCTTG GTATTCCTGC TGAAGATGTG 
    CCAGTTGATC AGTTCAGTCC TCTGGGGCGT ATATTGTACA AGGCACCTTC TGATGGAAAG 
    TGGGGGGAGC ATGAACTTGA TTACCTGCTC TTCATTGTTC GTGATGTTAG CGTAAATCCA 
    AACCCTGATG AGGTAGCTGA CATCAAGTAC GTTAACCAGG ATGAATTGAA GGAGCTTCTG 
    AGAAAAGCAG ATGCTGGCGA GGAAGGTTTG AAGTTGTCAC CGTGGTTCAG ACTAGTTGTG 
    GACAACTTCC TGTTCAAGTG GTGGGACCAT GTCGAGAAAG GAACTCTAGA GGAAGCAGCT 
    GACATGAAAG CGATTCACAA GCTGACTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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