ORF » Species Summary » Populus trichocarpa » POPTR_0005s25230g cDNA ORF clone

POPTR_0005s25230g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0005s25230g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0005s25230g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa11569 XM_002307639.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0005s25230g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa429724 XM_024601233.1
Latest version!		 Populus trichocarpa bifunctional dihydrofolate reductase-thymidylate synthase (LOC7454375), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00
OPa429725 XM_024601234.1
Latest version!		 Populus trichocarpa bifunctional dihydrofolate reductase-thymidylate synthase (LOC7454375), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0005s25230g ( XM_002307639.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_002307675.1 Populus trichocarpa hypothetical protein (POPTR_0005s25230g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa11569
    Clone ID Related Accession (Same CDS sequence) XM_002307639.1
    Accession Version XM_002307639.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 852bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008471). COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGCGACCCT CGCTTGGCTG CTGGAGTAGA GCCACCGCAG CTCCAGTTCG AAATCTCGCC 
    GGCGCTTCTT TGGCTGCAAC CTCACCGCTG TTTAAATTTC AAATCTTAAC TTCAAATTAC 
    AGACGGTTTA CTGCTATAGC GGGTGAGATT CCAATGAGGA GTTACCAAGT TGTGGTGGCT 
    GCTACTCGAG ATATGGGGAT TGGAAAGGAT GGAAAGTTAC CTTGGAGATT GCCTTCTGAT 
    CTCAAGTTTT TCAAGGAGGT TACACTGGCC ACATCGGATC CCGGGAAACA AAATGCAATT 
    TTGATGGGTA GGAAAACATG GGAAAGTATT CCTATCAAGT ACCGACCTCT TCCGGATCGA 
    TTGAATGTGG TCCTGACTCG GAGTTTTGAG ATTGAAGATG AAGAAAATGT TATTACATGT 
    GGGAGCATTT CCTCAGCTTT GGAATTGTTA GCTGAAACTC CCTATTGTTT CTCAATTGAT 
    AAGGTTTTTG TCATAGGAGG TGGCCAGATA TTGAGGGAAA CACTTAATGG TCCAGGATGT 
    GATGCCATCC ATGTTACGGA GATTGAGTCG AGTGTTGAGT GTGATACGTT CATTCCAAGC 
    ATTGATTTTT CTAAGTTTCA GCCTTGGTAT TCGTCTCCAC CATTGGTTGA AAATGGCTTT 
    CGATATTCTT TTGTAACTTA TGTTCATGTG AGGAACTCTG AGAATGAAAC TATTGCTGGA 
    AAGACTGGTG GAAAGTGTAA TGACGTTAAA TCGAATTCTA ATAGGTTTGA GGTAAAGGAT 
    TTCTCATTTC TTCCGAAGAT GATTTTTGAG AAAGGTGAGG AGTACATGCA TCATTCAAGC 
    AGTACAAAAT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_002307675.1
    CDS1..852
    Translation

    Target ORF information:

    RefSeq Version XM_002307639.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0005s25230g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_002307639.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGCGACCCT CGCTTGGCTG CTGGAGTAGA GCCACCGCAG CTCCAGTTCG AAATCTCGCC 
    GGCGCTTCTT TGGCTGCAAC CTCACCGCTG TTTAAATTTC AAATCTTAAC TTCAAATTAC 
    AGACGGTTTA CTGCTATAGC GGGTGAGATT CCAATGAGGA GTTACCAAGT TGTGGTGGCT 
    GCTACTCGAG ATATGGGGAT TGGAAAGGAT GGAAAGTTAC CTTGGAGATT GCCTTCTGAT 
    CTCAAGTTTT TCAAGGAGGT TACACTGGCC ACATCGGATC CCGGGAAACA AAATGCAATT 
    TTGATGGGTA GGAAAACATG GGAAAGTATT CCTATCAAGT ACCGACCTCT TCCGGATCGA 
    TTGAATGTGG TCCTGACTCG GAGTTTTGAG ATTGAAGATG AAGAAAATGT TATTACATGT 
    GGGAGCATTT CCTCAGCTTT GGAATTGTTA GCTGAAACTC CCTATTGTTT CTCAATTGAT 
    AAGGTTTTTG TCATAGGAGG TGGCCAGATA TTGAGGGAAA CACTTAATGG TCCAGGATGT 
    GATGCCATCC ATGTTACGGA GATTGAGTCG AGTGTTGAGT GTGATACGTT CATTCCAAGC 
    ATTGATTTTT CTAAGTTTCA GCCTTGGTAT TCGTCTCCAC CATTGGTTGA AAATGGCTTT 
    CGATATTCTT TTGTAACTTA TGTTCATGTG AGGAACTCTG AGAATGAAAC TATTGCTGGA 
    AAGACTGGTG GAAAGTGTAA TGACGTTAAA TCGAATTCTA ATAGGTTTGA GGTAAAGGAT 
    TTCTCATTTC TTCCGAAGAT GATTTTTGAG AAAGGTGAGG AGTACATGCA TCATTCAAGC 
    AGTACAAAAT AG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0005s25230g ( XM_024601233.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024457001.1 Populus trichocarpa bifunctional dihydrofolate reductase-thymidylate synthase (LOC7454375), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa429724
    Clone ID Related Accession (Same CDS sequence) XM_024601233.1
    Accession Version XM_024601233.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 873bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product bifunctional dihydrofolate reductase-thymidylate synthase isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGATGTTGC ATTATTGTAC TCAGAGGACT CTATTCCTAT CAAAGGTTTT ACTGAATTCT 
    AGCAAAATCA GCTTCTGCAA TTCAGCTTCT TTGGCTGCAA CCTCACCGCT GTTTAAATTT 
    CAAATCTTAA CTTCAAATTA CAGACGGTTT ACTGCTATAG CGGGTGAGAT TCCAATGAGG 
    AGTTACCAAG TTGTGGTGGC TGCTACTCGA GATATGGGGA TTGGAAAGGA TGGAAAGTTA 
    CCTTGGAGAT TGCCTTCTGA TCTCAAGTTT TTCAAGGAGG TTACACTGGC CACATCGGAT 
    CCCGGGAAAC AAAATGCAAT TTTGATGGGT AGGAAAACAT GGGAAAGTAT TCCTATCAAG 
    TACCGACCTC TTCCGGATCG ATTGAATGTG GTCCTGACTC GGAGTTTTGA GATTGAAGAT 
    GAAGAAAATG TTATTACATG TGGGAGCATT TCCTCAGCTT TGGAATTGTT AGCTGAAACT 
    CCCTATTGTT TCTCAATTGA TAAGGTTTTT GTCATAGGAG GTGGCCAGAT ATTGAGGGAA 
    ACACTTAATG GTCCAGGATG TGATGCCATC CATGTTACGG AGATTGAGTC GAGTGTTGAG 
    TGTGATACGT TCATTCCAAG CATTGATTTT TCTAAGTTTC AGCCTTGGTA TTCGTCTCCA 
    CCATTGGTTG AAAATGGCTT TCGATATTCT TTTGTAACTT ATGTTCATGT GAGGAACTCT 
    GAGAATGAAA CTATTGCTGG AAAGACTGGT GGAAAGTGTA ATGACGTTAA ATCGAATTCT 
    AATAGGTTTG AGGTAAAGGA TTTCTCATTT CTTCCGAAGA TGATTTTTGA GAAAGGTGAG 
    GAGTACATGC ATCATTCAAG CAGTACAAAA TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457001.1
    CDS244..1116
    Translation

    Target ORF information:

    RefSeq Version XM_024601233.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa bifunctional dihydrofolate reductase-thymidylate synthase (LOC7454375), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601233.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    ATGATGTTGC ATTATTGTAC TCAGAGGACT CTATTCCTAT CAAAGGTTTT ACTGAATTCT 
    AGCAAAATCA GCTTCTGCAA TTCAGCTTCT TTGGCTGCAA CCTCACCGCT GTTTAAATTT 
    CAAATCTTAA CTTCAAATTA CAGACGGTTT ACTGCTATAG CGGGTGAGAT TCCAATGAGG 
    AGTTACCAAG TTGTGGTGGC TGCTACTCGA GATATGGGGA TTGGAAAGGA TGGAAAGTTA 
    CCTTGGAGAT TGCCTTCTGA TCTCAAGTTT TTCAAGGAGG TTACACTGGC CACATCGGAT 
    CCCGGGAAAC AAAATGCAAT TTTGATGGGT AGGAAAACAT GGGAAAGTAT TCCTATCAAG 
    TACCGACCTC TTCCGGATCG ATTGAATGTG GTCCTGACTC GGAGTTTTGA GATTGAAGAT 
    GAAGAAAATG TTATTACATG TGGGAGCATT TCCTCAGCTT TGGAATTGTT AGCTGAAACT 
    CCCTATTGTT TCTCAATTGA TAAGGTTTTT GTCATAGGAG GTGGCCAGAT ATTGAGGGAA 
    ACACTTAATG GTCCAGGATG TGATGCCATC CATGTTACGG AGATTGAGTC GAGTGTTGAG 
    TGTGATACGT TCATTCCAAG CATTGATTTT TCTAAGTTTC AGCCTTGGTA TTCGTCTCCA 
    CCATTGGTTG AAAATGGCTT TCGATATTCT TTTGTAACTT ATGTTCATGT GAGGAACTCT 
    GAGAATGAAA CTATTGCTGG AAAGACTGGT GGAAAGTGTA ATGACGTTAA ATCGAATTCT 
    AATAGGTTTG AGGTAAAGGA TTTCTCATTT CTTCCGAAGA TGATTTTTGA GAAAGGTGAG 
    GAGTACATGC ATCATTCAAG CAGTACAAAA TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0005s25230g ( XM_024601234.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_024457002.1 Populus trichocarpa bifunctional dihydrofolate reductase-thymidylate synthase (LOC7454375), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa429725
    Clone ID Related Accession (Same CDS sequence) XM_024601234.1
    Accession Version XM_024601234.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 699bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product bifunctional dihydrofolate reductase-thymidylate synthase isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGAGGAGTT ACCAAGTTGT GGTGGCTGCT ACTCGAGATA TGGGGATTGG AAAGGATGGA 
    AAGTTACCTT GGAGATTGCC TTCTGATCTC AAGTTTTTCA AGGAGGTTAC ACTGGCCACA 
    TCGGATCCCG GGAAACAAAA TGCAATTTTG ATGGGTAGGA AAACATGGGA AAGTATTCCT 
    ATCAAGTACC GACCTCTTCC GGATCGATTG AATGTGGTCC TGACTCGGAG TTTTGAGATT 
    GAAGATGAAG AAAATGTTAT TACATGTGGG AGCATTTCCT CAGCTTTGGA ATTGTTAGCT 
    GAAACTCCCT ATTGTTTCTC AATTGATAAG GTTTTTGTCA TAGGAGGTGG CCAGATATTG 
    AGGGAAACAC TTAATGGTCC AGGATGTGAT GCCATCCATG TTACGGAGAT TGAGTCGAGT 
    GTTGAGTGTG ATACGTTCAT TCCAAGCATT GATTTTTCTA AGTTTCAGCC TTGGTATTCG 
    TCTCCACCAT TGGTTGAAAA TGGCTTTCGA TATTCTTTTG TAACTTATGT TCATGTGAGG 
    AACTCTGAGA ATGAAACTAT TGCTGGAAAG ACTGGTGGAA AGTGTAATGA CGTTAAATCG 
    AATTCTAATA GGTTTGAGGT AAAGGATTTC TCATTTCTTC CGAAGATGAT TTTTGAGAAA 
    GGTGAGGAGT ACATGCATCA TTCAAGCAGT ACAAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457002.1
    CDS320..1018
    Translation

    Target ORF information:

    RefSeq Version XM_024601234.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa bifunctional dihydrofolate reductase-thymidylate synthase (LOC7454375), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601234.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGAGGAGTT ACCAAGTTGT GGTGGCTGCT ACTCGAGATA TGGGGATTGG AAAGGATGGA 
    AAGTTACCTT GGAGATTGCC TTCTGATCTC AAGTTTTTCA AGGAGGTTAC ACTGGCCACA 
    TCGGATCCCG GGAAACAAAA TGCAATTTTG ATGGGTAGGA AAACATGGGA AAGTATTCCT 
    ATCAAGTACC GACCTCTTCC GGATCGATTG AATGTGGTCC TGACTCGGAG TTTTGAGATT 
    GAAGATGAAG AAAATGTTAT TACATGTGGG AGCATTTCCT CAGCTTTGGA ATTGTTAGCT 
    GAAACTCCCT ATTGTTTCTC AATTGATAAG GTTTTTGTCA TAGGAGGTGG CCAGATATTG 
    AGGGAAACAC TTAATGGTCC AGGATGTGAT GCCATCCATG TTACGGAGAT TGAGTCGAGT 
    GTTGAGTGTG ATACGTTCAT TCCAAGCATT GATTTTTCTA AGTTTCAGCC TTGGTATTCG 
    TCTCCACCAT TGGTTGAAAA TGGCTTTCGA TATTCTTTTG TAACTTATGT TCATGTGAGG 
    AACTCTGAGA ATGAAACTAT TGCTGGAAAG ACTGGTGGAA AGTGTAATGA CGTTAAATCG 
    AATTCTAATA GGTTTGAGGT AAAGGATTTC TCATTTCTTC CGAAGATGAT TTTTGAGAAA 
    GGTGAGGAGT ACATGCATCA TTCAAGCAGT ACAAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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