ORF » Species Summary » Populus trichocarpa » LOC18109962 cDNA ORF clone

LOC18109962 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18109962 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18109962 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa429766 XM_024601288.1
Latest version!		 Populus trichocarpa disease resistance protein RPM1 (LOC18109962), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $475.30
$679.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18109962 ( XM_024601288.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024457056.1 Populus trichocarpa disease resistance protein RPM1 (LOC18109962), mRNA.
    Price & Availability↑
    CloneID OPa429766
    Clone ID Related Accession (Same CDS sequence) XM_024601288.1
    Accession Version XM_024601288.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2616bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product disease resistance protein RPM1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037289.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 29% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGGCAGAGT CGGCGGTGAG CCTTGTTGTT GATAAATTGC TTCCGTTGCT AACACAAGAA 
    GTGAAACTAT TGAAAGGCGT CCATGATGAA TTGGTTGGTG TCAAAGATGA ATTGGAAGTC 
    ATTCGTGCTT TCCTGAAAGA TGCAGATTCA AAGGCTGAGA AAGAAGGCAT CGGTGAGGGT 
    GTGAAAGTAC TGGTAAACCA AATAAGAGAA GAAGCTCATC ACATTGAAGA TGTCATCGAT 
    GATTACATGT TGCATGTGGC AAGACATCCT GATCATCGAC ATGGACTCCT ACGTCGTATT 
    GCTTCTTTGA TTAAAACATT CAGTTCGCGT CATGAGATAG CATCAGAGAT TAAAGACATC 
    AAATCATCAC TTCTAGATAT CAAGAATAGA AGTCAAACAT TCCACTTCAT TTCTTCAAAT 
    CAGGGAGCAT CAAGCAGCAG CAGCAGCAAT GCGGGAAGAG GGTTAATGGA TCACCTTCGA 
    CTGAGTTCTC TTTTCATTGA AGAAGCTGAG CTTGTTGGGA TTGAATCTCC AAGAGATGAA 
    TTGATAAGCT ACTTATTAAG TGGAGTTTCT CAGAGGACAG TGATCGCAGT GGTTGGAATG 
    GGAGGTGTGG GAAAAACCAC AATGGCCAAG AAAGTATATG ACAACCACAG GGTGAAAGAG 
    CACTTCCAAT ACCATGCTTG GATCACTGTG TCTCAATCAT ATGATAACAG GGAGCTACTA 
    CGGAGCATTC TGAAGAGATT CTATGAAGTG AAAAATAGAA ATGAGGATGT TGCTAATTTT 
    AGCAGAGGAT CGTCATTGGT TCATGTCTAT CATATAGAAC CTTTACCTCA AAAGGAGGCG 
    TGGGAACTCT TCTGCAATAA AGCATTCAGG TCTGAGTTTG ATAGGCAATG TCCAAAAGAT 
    CTGGTGGAAT TGTCACAGGA CATTGTTAGA AGATGTGGAG GATTGCCTCT GGCAATTGTG 
    GCTGTTAGTG GACTTCTAGC AACCAAAGAA AAGAGCATTC TAGAATGGAA AAAAGTCCTC 
    AGTGGCCTTG GTGGTTCTGC AATGGCGAGT GATCCATACA TTGATAGTGT CACTAACATT 
    CTATCTCTCA GCTATGGTGA TCTGCCTTAC CACCTCAAAT CTTGTTTCTT ATATTTTGGC 
    ATGTTTCCTG AAGATTTTTC CATTGTGCAT GGAAAAATAA TTCGATTATG GGTGGCTGAG 
    GGTTTTGTAG AAGAAAAACC AGGCATGACA CTAGAGGACG TTGGAGAAGA ATACTTCATT 
    GAACTCGTTC GTCGAAGTTT GGTTCAAGTG GATGAAGTTT TTCACGGAGT TCCCTTAACA 
    TGTCATGTTC ATGATATGGT CCGTGATGTC ATTCTTTCCA AGTCAGAAGA ACTGAGTTTC 
    TGCCATGTTT CCAGCAGTTG CTCAACTTTT CAAGGCATAG CACGACATCT CTCCATAAGC 
    AACAGAGGAA GCAACACTCC AAAGAGTAGC ACCAAGTCCC AAACTCGCTC TATTATGGTC 
    TTTGACGAAG TAAAGCTGCA GAAGGCCACA ATTTCAGTGA TACTTGCAAA ATTCAAGCTT 
    TTGACTACAT TAGATTTTGA AAACTGTCCT ATAGATCACC TTCCCAAAGA ACTTGGAAAT 
    TTGCTACATC TAAGGTATTT AAACTTGAGA AATACCAAAG TAGCAAAACT TCCAAAATCA 
    ATAAGAAAGC TGCATAACCT GGAATCTTTA GATTTGAGAT ATTCTTTCGT GGAAGAGTTG 
    CCAGTTAAGA TCAGTAATTT CCCTAAATTG CGACATCTTT TGGCTGAAGA TAAAAAGACT 
    CGGGCATTGA AGATAAAAGG CAGCATTAAG CATTTGGAGT TCTTACAAAC GTTGTCTAAA 
    ATTAATGTGG ATGACAATGT GAGCTTGATC AATGACGGCC TGCAAGTGTC AACGGAATTG 
    AAGACATTGG GTATCAGAAA TTTGAAAAGG GAACATGGGA GGTATCTATG CACTGCATTG 
    GAGAAGATGA CTCGCCTGCG GTTGCTACTT GTTTGTTCAA TAAATCCCAC GAATGAAGTT 
    CTTGAATTGC AATCGATGTC TTCTCCTCCT CTTGAGCTGC GAAGTATCTG GCTTGAGGGC 
    CAATTAGAAA GGTTACCAAA TTGGATTTCC AAAATACACA ATCTGGCTGA ACTGAGATTG 
    AGTTTCACAA ACTTGAAGGA TGATTCCTTT GAAGTCCTTC AAGCTCTGCC CAATCTAAAT 
    CGTCTTGGAC TCGTATGTGC ATACAATGGA GAGAAGATGC ATTTTGAAGG AGGAGGGTTT 
    CAGAAACTCA AGTCTCTGTA TCTTGTAGGC TTGAGTAATT TGAAGGAAAT GTTAATAGAC 
    GAAGGAGCAT TGCCACTTCT TGAAAAGCTA CAGATGGGAC CTTGCCCAAA ACTGAAGGAA 
    GTGCCTTCCG GATTTAAGTA CTTGAGATAT CTCAAAGATT TATCATTCAC AGGGATGACA 
    AATGAGTTCA CTCAAAGATT GTCACAGCAA GAATCAGAGA AGGTGAGGCA TGTACCGATT 
    ATCCAATATG ATGGTACTTA TGATCCCAGT GACGAAGGAT CTTATGAAGC ATGGGTGGAG 
    CGATATTTCA GACGAGTAGG AATCAAAATG ACCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024457056.1
    CDS1..2616
    Translation

    Target ORF information:

    RefSeq Version XM_024601288.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa disease resistance protein RPM1 (LOC18109962), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024601288.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    ATGGCAGAGT CGGCGGTGAG CCTTGTTGTT GATAAATTGC TTCCGTTGCT AACACAAGAA 
    GTGAAACTAT TGAAAGGCGT CCATGATGAA TTGGTTGGTG TCAAAGATGA ATTGGAAGTC 
    ATTCGTGCTT TCCTGAAAGA TGCAGATTCA AAGGCTGAGA AAGAAGGCAT CGGTGAGGGT 
    GTGAAAGTAC TGGTAAACCA AATAAGAGAA GAAGCTCATC ACATTGAAGA TGTCATCGAT 
    GATTACATGT TGCATGTGGC AAGACATCCT GATCATCGAC ATGGACTCCT ACGTCGTATT 
    GCTTCTTTGA TTAAAACATT CAGTTCGCGT CATGAGATAG CATCAGAGAT TAAAGACATC 
    AAATCATCAC TTCTAGATAT CAAGAATAGA AGTCAAACAT TCCACTTCAT TTCTTCAAAT 
    CAGGGAGCAT CAAGCAGCAG CAGCAGCAAT GCGGGAAGAG GGTTAATGGA TCACCTTCGA 
    CTGAGTTCTC TTTTCATTGA AGAAGCTGAG CTTGTTGGGA TTGAATCTCC AAGAGATGAA 
    TTGATAAGCT ACTTATTAAG TGGAGTTTCT CAGAGGACAG TGATCGCAGT GGTTGGAATG 
    GGAGGTGTGG GAAAAACCAC AATGGCCAAG AAAGTATATG ACAACCACAG GGTGAAAGAG 
    CACTTCCAAT ACCATGCTTG GATCACTGTG TCTCAATCAT ATGATAACAG GGAGCTACTA 
    CGGAGCATTC TGAAGAGATT CTATGAAGTG AAAAATAGAA ATGAGGATGT TGCTAATTTT 
    AGCAGAGGAT CGTCATTGGT TCATGTCTAT CATATAGAAC CTTTACCTCA AAAGGAGGCG 
    TGGGAACTCT TCTGCAATAA AGCATTCAGG TCTGAGTTTG ATAGGCAATG TCCAAAAGAT 
    CTGGTGGAAT TGTCACAGGA CATTGTTAGA AGATGTGGAG GATTGCCTCT GGCAATTGTG 
    GCTGTTAGTG GACTTCTAGC AACCAAAGAA AAGAGCATTC TAGAATGGAA AAAAGTCCTC 
    AGTGGCCTTG GTGGTTCTGC AATGGCGAGT GATCCATACA TTGATAGTGT CACTAACATT 
    CTATCTCTCA GCTATGGTGA TCTGCCTTAC CACCTCAAAT CTTGTTTCTT ATATTTTGGC 
    ATGTTTCCTG AAGATTTTTC CATTGTGCAT GGAAAAATAA TTCGATTATG GGTGGCTGAG 
    GGTTTTGTAG AAGAAAAACC AGGCATGACA CTAGAGGACG TTGGAGAAGA ATACTTCATT 
    GAACTCGTTC GTCGAAGTTT GGTTCAAGTG GATGAAGTTT TTCACGGAGT TCCCTTAACA 
    TGTCATGTTC ATGATATGGT CCGTGATGTC ATTCTTTCCA AGTCAGAAGA ACTGAGTTTC 
    TGCCATGTTT CCAGCAGTTG CTCAACTTTT CAAGGCATAG CACGACATCT CTCCATAAGC 
    AACAGAGGAA GCAACACTCC AAAGAGTAGC ACCAAGTCCC AAACTCGCTC TATTATGGTC 
    TTTGACGAAG TAAAGCTGCA GAAGGCCACA ATTTCAGTGA TACTTGCAAA ATTCAAGCTT 
    TTGACTACAT TAGATTTTGA AAACTGTCCT ATAGATCACC TTCCCAAAGA ACTTGGAAAT 
    TTGCTACATC TAAGGTATTT AAACTTGAGA AATACCAAAG TAGCAAAACT TCCAAAATCA 
    ATAAGAAAGC TGCATAACCT GGAATCTTTA GATTTGAGAT ATTCTTTCGT GGAAGAGTTG 
    CCAGTTAAGA TCAGTAATTT CCCTAAATTG CGACATCTTT TGGCTGAAGA TAAAAAGACT 
    CGGGCATTGA AGATAAAAGG CAGCATTAAG CATTTGGAGT TCTTACAAAC GTTGTCTAAA 
    ATTAATGTGG ATGACAATGT GAGCTTGATC AATGACGGCC TGCAAGTGTC AACGGAATTG 
    AAGACATTGG GTATCAGAAA TTTGAAAAGG GAACATGGGA GGTATCTATG CACTGCATTG 
    GAGAAGATGA CTCGCCTGCG GTTGCTACTT GTTTGTTCAA TAAATCCCAC GAATGAAGTT 
    CTTGAATTGC AATCGATGTC TTCTCCTCCT CTTGAGCTGC GAAGTATCTG GCTTGAGGGC 
    CAATTAGAAA GGTTACCAAA TTGGATTTCC AAAATACACA ATCTGGCTGA ACTGAGATTG 
    AGTTTCACAA ACTTGAAGGA TGATTCCTTT GAAGTCCTTC AAGCTCTGCC CAATCTAAAT 
    CGTCTTGGAC TCGTATGTGC ATACAATGGA GAGAAGATGC ATTTTGAAGG AGGAGGGTTT 
    CAGAAACTCA AGTCTCTGTA TCTTGTAGGC TTGAGTAATT TGAAGGAAAT GTTAATAGAC 
    GAAGGAGCAT TGCCACTTCT TGAAAAGCTA CAGATGGGAC CTTGCCCAAA ACTGAAGGAA 
    GTGCCTTCCG GATTTAAGTA CTTGAGATAT CTCAAAGATT TATCATTCAC AGGGATGACA 
    AATGAGTTCA CTCAAAGATT GTCACAGCAA GAATCAGAGA AGGTGAGGCA TGTACCGATT 
    ATCCAATATG ATGGTACTTA TGATCCCAGT GACGAAGGAT CTTATGAAGC ATGGGTGGAG 
    CGATATTTCA GACGAGTAGG AATCAAAATG ACCTAA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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