ORF » Species Summary » Populus trichocarpa » LOC18109837 cDNA ORF clone

LOC18109837 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18109837 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18109837 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa10078 XM_006388067.2
Latest version!		 Populus trichocarpa probable amidase At4g34880 (LOC18109837), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa38480 XM_006388067.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0320s00210g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18109837 ( XM_006388067.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006388129.2 Populus trichocarpa probable amidase At4g34880 (LOC18109837), mRNA.
    Price & Availability↑
    CloneID OPa10078
    Clone ID Related Accession (Same CDS sequence) XM_006388067.2
    Accession Version XM_006388067.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1557bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable amidase At4g34880
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006388067.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCCAACA ATTCTCTACT GTTTTTAATT CTTGCCTTTT TATTATTATC TGGGTTCTTT 
    ACCAAGACAA GCAGTGCCTT CTCAATTGAA GAAGCAACTA TAGATGATCT TCAACTAGCT 
    TTTAAGCAAA ACCAACTAAC CTCTAGACAA CTCGTTGAGT TCTACCTCAA ACGGATCCGC 
    AGACTCAATC CGCTTCTTAG AGGGGTCATA GAGGTGAACC CTGATGCACT CTTTCTAGCC 
    GATAAGGCTG ACCGAGAGCG CAAGGTCAAC ACCCCAGGGT CAACTGGTGG TTTGCACGGG 
    ATTCCTATCC TGCTCAAGGA CAATATTGCA ACCAAAGACA AACTGAACAC TACAGCTGGT 
    TCTTATGCAC TACTTGGATC AGTTGTGCCT CGGGATGCAG GTGTGGTAAT GAAGTTGAGG 
    AAAGCTGGAG CTATCATATT AGGGAAGTCT AGCTTGAGTG AGTGGGCTAA TTTCAGGACA 
    GATGGCGCAC CCTCAGGTTT TTGTGGGAGA AGCGGCCAAG GAAAGAATCC ATATGTTTTG 
    TCCGCGACTC CTTGTGGGTC AAGCAGCGGG TCAGGAATAT CAGTGGCAGC AAACTTGGCA 
    GCCGTGTCAC TTGGGACTGA GACTGATGGC TCCATAATAT GTCCATCGAG TTACAACTCA 
    GTTGTGGGCA TCAAACCCAC TGTTGGTCTC ACTAGTAGAG CCGGGGTTAT CCCCATCACC 
    CCTAGACAGG ACACTGTGGG GCCAATGTGC AGGACAGTAT CGGACGCTGT ATATGTTCTT 
    GATGCCATTG TAGGCTTTGA TTCAAATGAT GCTGCAACCA GAGAAGCAGC AAAATATATT 
    CCAAACGGTG GCTACAGACA ATTTCTTAAC CCTCTTGGGC TTAAAGGGAA GAGATTGGGG 
    ATATTGAGGA CTCCATTTTA CAATTCGGGC AACGATAAAG GATCCCGTCG GCATCAAACT 
    TTTGAGCACC ATTTTCAAAC ACTAAGACGA CAAGGTGCAG TTCTCGTAGA CCATTTGCAA 
    ATAAGCGACG TTGACACGAT CACAGCCGGG CAGAATGGAG AATTACTTGC AACGTTGCTC 
    GAATTCAAGC CAGCCTTGAA TGAGTATCTA GAACAGTTGG TGGCGTCTCC AGTCCGATCC 
    TTAGCAGCTG TGATAGCCTT CAACAAAAAA TTCTCCAGAT TGGAAAAGAC CAAGGAATAC 
    GGTCAAGAGC TCTTCAAGAA AGCCGAGTTC TTGAGTCGAA ACATAACAAA CATTGATGCT 
    ACATTGAAGA AACTGGTGTC AACATTCAGC AAACTCTCGA AGAATGGCCT GGAGAAATTA 
    ATCAAGACGA ACAAACTAGA TGCGGTGGTG GCACCTGATT TTAGTTATGT GTTATCATTT 
    GTTCTTGCAA TTGGACAATA CCCTGGAATC AGTGTCCCTG CTGGGTATGA CAGTGACGGT 
    GTGCCTTTTG GCATTTGCTT CGGTGGACCA AAGGGTTCGG AGCCAAAACT AATTGAGATT 
    GCTTATGGCT TTGAGACAGC TACCAAGGTT AGGAGGCCCC CTGCATTCAA GCCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006388129.2
    CDS130..1686
    Translation

    Target ORF information:

    RefSeq Version XM_006388067.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable amidase At4g34880 (LOC18109837), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006388067.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCCAACA ATTCTCTACT GTTTTTAATT CTTGCCTTTT TATTATTATC TGGGTTCTTT 
    ACCAAGACAA GCAGTGCCTT CTCAATTGAA GAAGCAACTA TAGATGATCT TCAACTAGCT 
    TTTAAGCAAA ACCAACTAAC CTCTAGACAA CTCGTTGAGT TCTACCTCAA ACGGATCCGC 
    AGACTCAATC CGCTTCTTAG AGGGGTCATA GAGGTGAACC CTGATGCACT CTTTCTAGCC 
    GATAAGGCTG ACCGAGAGCG CAAGGTCAAC ACCCCAGGGT CAACTGGTGG TTTGCACGGG 
    ATTCCTATCC TGCTCAAGGA CAATATTGCA ACCAAAGACA AACTGAACAC TACAGCTGGT 
    TCTTATGCAC TACTTGGATC AGTTGTGCCT CGGGATGCAG GTGTGGTAAT GAAGTTGAGG 
    AAAGCTGGAG CTATCATATT AGGGAAGTCT AGCTTGAGTG AGTGGGCTAA TTTCAGGACA 
    GATGGCGCAC CCTCAGGTTT TTGTGGGAGA AGCGGCCAAG GAAAGAATCC ATATGTTTTG 
    TCCGCGACTC CTTGTGGGTC AAGCAGCGGG TCAGGAATAT CAGTGGCAGC AAACTTGGCA 
    GCCGTGTCAC TTGGGACTGA GACTGATGGC TCCATAATAT GTCCATCGAG TTACAACTCA 
    GTTGTGGGCA TCAAACCCAC TGTTGGTCTC ACTAGTAGAG CCGGGGTTAT CCCCATCACC 
    CCTAGACAGG ACACTGTGGG GCCAATGTGC AGGACAGTAT CGGACGCTGT ATATGTTCTT 
    GATGCCATTG TAGGCTTTGA TTCAAATGAT GCTGCAACCA GAGAAGCAGC AAAATATATT 
    CCAAACGGTG GCTACAGACA ATTTCTTAAC CCTCTTGGGC TTAAAGGGAA GAGATTGGGG 
    ATATTGAGGA CTCCATTTTA CAATTCGGGC AACGATAAAG GATCCCGTCG GCATCAAACT 
    TTTGAGCACC ATTTTCAAAC ACTAAGACGA CAAGGTGCAG TTCTCGTAGA CCATTTGCAA 
    ATAAGCGACG TTGACACGAT CACAGCCGGG CAGAATGGAG AATTACTTGC AACGTTGCTC 
    GAATTCAAGC CAGCCTTGAA TGAGTATCTA GAACAGTTGG TGGCGTCTCC AGTCCGATCC 
    TTAGCAGCTG TGATAGCCTT CAACAAAAAA TTCTCCAGAT TGGAAAAGAC CAAGGAATAC 
    GGTCAAGAGC TCTTCAAGAA AGCCGAGTTC TTGAGTCGAA ACATAACAAA CATTGATGCT 
    ACATTGAAGA AACTGGTGTC AACATTCAGC AAACTCTCGA AGAATGGCCT GGAGAAATTA 
    ATCAAGACGA ACAAACTAGA TGCGGTGGTG GCACCTGATT TTAGTTATGT GTTATCATTT 
    GTTCTTGCAA TTGGACAATA CCCTGGAATC AGTGTCCCTG CTGGGTATGA CAGTGACGGT 
    GTGCCTTTTG GCATTTGCTT CGGTGGACCA AAGGGTTCGG AGCCAAAACT AATTGAGATT 
    GCTTATGGCT TTGAGACAGC TACCAAGGTT AGGAGGCCCC CTGCATTCAA GCCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18109837 ( XM_006388067.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006388129.1 Populus trichocarpa hypothetical protein (POPTR_0320s00210g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa38480
    Clone ID Related Accession (Same CDS sequence) XM_006388067.1
    Accession Version XM_006388067.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1557bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_006256000). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCCAACA ATTCTCTACT GTTTTTAATT CTTGCCTCTT TATTATTATA TGGGTTCTCT 
    ACCAAGACAA GCAGTGCCTT ATCAATTGAA GAAGCAACTA TAGATGATCT TCAACTAGCT 
    TTTAAGCAAA ACCAACTAAC CTCTAGACAA CTCGTTGAGT TCTACCTCAA ACGGATCCGC 
    AGACTCAATC CGCTTCTTAG AGGGGTCATA GAGGTGAACC CTGATGCACT CTTTCTAGCC 
    GATAAGGCTG ACCGAAAGCG CAAGGTCAAC ACCCCAGGGT CAACTGGTGG TTTGCACGGG 
    ATTCCTATCC TGCTCAAGGA CAATATTGCA ACCAAAGACA AACTGAACAC TACAGCTGGT 
    TCTTATGCAC TACTTGGATC AGTTGTGCCT CGGGATGCAG GTGTAGTGAT GAAGTTGAGG 
    AAAGCTGGAG CGATCATATT AGGGAAGTCT AGCTTGAGTG AGTGGGCTAA TTTCAGGACA 
    AATGGCGCAC CCTCAGGTTT TTGTGGGAGA AGCGGCCAAG GAAAGAATCC ATATGTTTTG 
    TCCGTGACAC CTTGTGGGTC AAGCAGCGGG TCAGGAATAT CAGTGGCAGC GAACTTGGCA 
    GCCGTGTCAC TTGGAACCGA GACTGATGGC TCCATCCTAT GTCCATCGAG TTACAACTCA 
    GTTGTGGGCA TCAAACCCAC TGTTGGTCTC ACTAGTAGAG CTGGGGTTAT CCCCATCACC 
    CCTAGACAGG ACACTGTGGG GCCAATGTGC AGGACAGTAT CGGACGCTGT ATATGTTCTT 
    GATGCCATTG TAGGCTCTGA TTCAAATGAT GCTGCAACCA GAGAAGCAGC AAAATATATT 
    CCAAACGGTG GCTACAGACA ATTTCTTAAC CCTCTTGGGC TTAAAGGGAA GAGATTGGGG 
    ATATTGAGGA CTCTATTTTA CAATTCGGGC AACGATAAAG GATCCCGTCG GCATCAAACT 
    TTTGAGCACC ATTTTCAAAC ACTAAGACGA CAAGGTGCAG TTCTCGTAGA CAATTTGCAA 
    ATAAGCGACA TTGACACGAT CACAGCCGGG CAGAATGGAG AATTACTTGC AATGTTGCTC 
    GAATTCAAGC CAGCCTTGAA TGAGTATCTA GAACAGTTGG TGGCGTCTCC AGTCCGATCC 
    TTAGCAGCTG TGATAGCCTT CAACAAAAAA TTCTCCAGAC TGGAAAAGAC CAAGGAATAC 
    GGTCAAGAGC TCTTCGAGAA AGCCGAGTTC TTGAGTCGAA ACATAACAAA CATTGATGCT 
    ACATTGAAGA AACTGGTGTC AACATTCAGC AAACTCTCGA AGAATGGCCT GGAGAAATTA 
    ATCAAGAAGA ACAAACTAGA TGCGGTGGTG GCACCTGATT TTAGTTATGT GTTATCATTT 
    GTTCTTGCAA TTGGACAATA CCCTGGAATC AGTGTCCCTG CTGGGTATGA CAGTGACGGT 
    GTGCCTTTTG GCATTTGCTT CGGTGGACCA AAGGGTTCGG AGCCAAAACT AATTGAGATT 
    GCTTATGGCT TTGAGACAGC TACCAAGGTT AGGAGGCCCC CTGCATTCAA GCCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006388129.1
    CDS102..1658
    Translation

    Target ORF information:

    RefSeq Version XM_006388067.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0320s00210g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006388067.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGGCCAACA ATTCTCTACT GTTTTTAATT CTTGCCTCTT TATTATTATA TGGGTTCTCT 
    ACCAAGACAA GCAGTGCCTT ATCAATTGAA GAAGCAACTA TAGATGATCT TCAACTAGCT 
    TTTAAGCAAA ACCAACTAAC CTCTAGACAA CTCGTTGAGT TCTACCTCAA ACGGATCCGC 
    AGACTCAATC CGCTTCTTAG AGGGGTCATA GAGGTGAACC CTGATGCACT CTTTCTAGCC 
    GATAAGGCTG ACCGAAAGCG CAAGGTCAAC ACCCCAGGGT CAACTGGTGG TTTGCACGGG 
    ATTCCTATCC TGCTCAAGGA CAATATTGCA ACCAAAGACA AACTGAACAC TACAGCTGGT 
    TCTTATGCAC TACTTGGATC AGTTGTGCCT CGGGATGCAG GTGTAGTGAT GAAGTTGAGG 
    AAAGCTGGAG CGATCATATT AGGGAAGTCT AGCTTGAGTG AGTGGGCTAA TTTCAGGACA 
    AATGGCGCAC CCTCAGGTTT TTGTGGGAGA AGCGGCCAAG GAAAGAATCC ATATGTTTTG 
    TCCGTGACAC CTTGTGGGTC AAGCAGCGGG TCAGGAATAT CAGTGGCAGC GAACTTGGCA 
    GCCGTGTCAC TTGGAACCGA GACTGATGGC TCCATCCTAT GTCCATCGAG TTACAACTCA 
    GTTGTGGGCA TCAAACCCAC TGTTGGTCTC ACTAGTAGAG CTGGGGTTAT CCCCATCACC 
    CCTAGACAGG ACACTGTGGG GCCAATGTGC AGGACAGTAT CGGACGCTGT ATATGTTCTT 
    GATGCCATTG TAGGCTCTGA TTCAAATGAT GCTGCAACCA GAGAAGCAGC AAAATATATT 
    CCAAACGGTG GCTACAGACA ATTTCTTAAC CCTCTTGGGC TTAAAGGGAA GAGATTGGGG 
    ATATTGAGGA CTCTATTTTA CAATTCGGGC AACGATAAAG GATCCCGTCG GCATCAAACT 
    TTTGAGCACC ATTTTCAAAC ACTAAGACGA CAAGGTGCAG TTCTCGTAGA CAATTTGCAA 
    ATAAGCGACA TTGACACGAT CACAGCCGGG CAGAATGGAG AATTACTTGC AATGTTGCTC 
    GAATTCAAGC CAGCCTTGAA TGAGTATCTA GAACAGTTGG TGGCGTCTCC AGTCCGATCC 
    TTAGCAGCTG TGATAGCCTT CAACAAAAAA TTCTCCAGAC TGGAAAAGAC CAAGGAATAC 
    GGTCAAGAGC TCTTCGAGAA AGCCGAGTTC TTGAGTCGAA ACATAACAAA CATTGATGCT 
    ACATTGAAGA AACTGGTGTC AACATTCAGC AAACTCTCGA AGAATGGCCT GGAGAAATTA 
    ATCAAGAAGA ACAAACTAGA TGCGGTGGTG GCACCTGATT TTAGTTATGT GTTATCATTT 
    GTTCTTGCAA TTGGACAATA CCCTGGAATC AGTGTCCCTG CTGGGTATGA CAGTGACGGT 
    GTGCCTTTTG GCATTTGCTT CGGTGGACCA AAGGGTTCGG AGCCAAAACT AATTGAGATT 
    GCTTATGGCT TTGAGACAGC TACCAAGGTT AGGAGGCCCC CTGCATTCAA GCCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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