POPTR_0361s00200g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0361s00200g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0361s00200g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa38449 XM_006388015.1
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Populus trichocarpa hypothetical protein (POPTR_0361s00200g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 19-21 $559.30
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa38449
    Clone ID Related Accession (Same CDS sequence) XM_006388015.1
    Accession Version XM_006388015.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3411bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_006255961). COMPLETENESS: incomplete on both ends.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    ATGGCAGCAG AGCTTCTTCT TACGTTTGCC ATGGAGGAGA CTTTGACAAG GGTCAGTTCC 
    ATAGCTGCTG AAGGGATCAG ACTTGCTTGG GGATTGAAGG GCCACCTGCA AAGGCTCGAC
    AAGTCTTCGA AAATGATCCA AGCTGTGCTC CAAGATGCAG CCAGAAAGGC AGTAACAAAC
    GATTCGGCGA GGCTTTGGCT GGAGAGGCTA CAAGATGTAG CTTACGATGC TGAAGATGTT
    CTAGACGAGT TTGCTTATGA GATTCTCCGA AAAGACCAAA AGAAGGGAAA GGTACGTTAC
    TGCTTTTCAC TCCACAACCC TGTCGCATTC CGTCTGAATA TGGGTCAAAA AGTTAAGGAG
    ATCAATGGAG CACTGGATGA AATTCGAAAA GAAGCAGATT TATTTCAATT GACATCTCTA
    CCTGTAGAAG GAGCTCAAGA AGTTAGCAGG GGTCCAAATC GAGAGACACA TTCGTTCCTT
    GACAGCTCAG AAGTTGTAGG AAGGGATGGT GATGTCTCTA AAGTTATGGA ATTGCTGACT
    AGCTTGACCA AACACCAACA TGTCCTTCCG GTTGTCCCTA TAGTGGGGAT GGGTGGCCTC
    GGAAAGACTA CTATAGCAAA AAAAGTTTGT GAAGCAGTGA CGGAGAAAAA GCTTTTTGAT
    GTGACTCTAT GGGTTTGCGC TTCTAATTTT AATAATGTAA AGATTTTAGG AGCAATGTTG
    CAAGTGATTG ACAAAACTAC GGGTGGGTTG GATATTCTTG ATGCAATTCT TCGAAACCTT
    AAGAAAGAGC TGGAAAATAA GACATTTTTT CTTGTTCTTG ATGATGTGTG GAATGAAGCC
    CCTGATAATT GGGATGATTT GAAGGAGCAA CTGTTAACAA TTAACAGCAA GAATGGGAAT
    GCTGTTGTTG TTACAACCCG CAGTAAGAAA GTAGCAGACA TGATGGGGAC TTCTCCTGGG
    ATTCAGCACG AGCCAGGGAG ACTTTCAGAT GATCAATGTT GGTCCATTAT CAAGCAAAAG
    GTGAGCAGTG GTGGGGGAGC AACAATAGCT TCAGACTTGG AGTCTATTGG GAAAGAGATT
    GCAAAGAAAT GTGGAGGGAT TCCATTACTT GCTAATGTTC TGGGAGGAAC TCTTCACGGA
    AAGCAGGCAC AGGAGTGGAA GTCAATTCTA AACAGTGGAA TTTGGGATTC TCAGGATGGA
    AATAAAGCTT TGCGCATATT GAGACTCAGT TTTGATTACG TGTCATCGCC AACATTGAAA
    AAATGTTTTG CATACTGTTC TATTTTTCCT AAAGATTTTG AAATTGATAG GGAAGAGCTC
    ATTCAACTTT GGATGGCTGA AGGTTTTCTC GGGACATCAA CTGGGACGAT GGAAGACGAA
    GGCGACAAGT GTTTCAATGA CTTGCTTGCA AATTCCTTTT TCCAAGATGT TGAAAGGAAC
    GAGCCTGAGA TCGTAACAAG TTGCAAGATG CATGATCTTG TGCATGATCT TGCATTACAG
    GTCTCAAAAT CAGAAGTGTT AAATCTGGAG GAGGATTCGT CTCTTGATGG TGCATCTCAT
    ATTCGTCATC TAAATCTCAT GTCTCGTGTG GATGATGAGG CAGCATTAAC AGCGGTTGAT
    GCTAGAAAAT TGCGAACTGT TTTCTCAAAT GGTGATGTAT TCAATCGGTC TTGGAAATTC
    AAAAGCTTGA GAACTCTCAA ATTGCAGGAA TCTGATATCA CAGAGTTACC AGATTCAATT
    TGCAAGCTGA GACATTTGAG ATATCTTGAT GTCTCGGATA CTGCTATCAA ATCATTGCCG
    GAATCCATCA CCAAGCTCTA CCATTTGGAA ACATTAAGAT TCACTGATTG CAAGTCACTG
    AAAAAGCTTC CCAAGAAAAT GAGGAATTTA GTCAGCTTGA GACATCTTCA TTTTGATGAT
    CCAAAGCTAG TGCCAGATGA GGTGAGACTC TTAACACGCC TTCAAACTCT GCCTTTTTTT
    GTTGTGGGTC CAGATCATAT GGTTGAAGAG CTGGGATGTT TGAATGAACT AAGAGGAGCA
    TTGAAGATAT GCAAGCTTGA GCAAGTTAGA GACAGAGAAG AAGCTGAGAA GGCAGAACTG
    AGTGGAAAAA GAATGAACAA ATTGGTGTTT GAATGGAGTG ATGATGAAGG TAACAGCAGT
    GTCAATAGCG AGGATGTGCT GGAAGGCCTG CAGCCTCACC CAGACATAAG AAGCTTGAAA
    ATTAAGGGTT ATGGAGGTGA AGATTTCTCA TCATGGATAT TGCAACTCAA TAATCTGACG
    GTGCTGAGAT TGAATGGCTG CAGCAAGTTG AGGCAACTCC CAACACTTGG ATGCCTTCCT
    CGCCTTAAGA TTCTAAAGAT ACGTGGAATG CCTAATGTGA AATCTATAGG CAACGAGTTC
    TATAGTAGCA GCGCACCAAA ACTGTTTCCA GCACTAAAAG AACTCTTTTT GCATGGTATG
    GATGGTCTTG AAGAATTGAT GTTACCAGGT GGAGAAGTTG TTGCAGTATT TCCTTGTCTT
    GAAATGTTGA CCATTTGGAT GTGTGGAAAG TTGAAAAGCA TTTCGATATG TCGTCTTTCA
    TCTCTTGTAA AATTTGAAAT TGGCAGTTGT CATGAACTGA GATTTTTGTC TGGTGAGTTT
    GATGGCTTCA CGTCTCTTCA AATTTTAGAG ATATCGTGGT GTCCAAAGCT GGCATCCATT
    CCAAGCGTAC AACACTGCAC AGCTCTGGTG CAATTGGGTA TATGTTGGTG CTGTGAGTCG
    ATCTCAATTC CTGCTCTTCC AAGCGGACTA CAAAGTTGCG CATCTCTAGA GGAATTATCA
    ATAATTAAGT GGAGTGAGCT TATTATCCAT AGCAATGATT TTCAAGAATT GTCTTCGCTT
    CGAACATTAT TGATTAGAGG TTGTGATAAG CTCATCAGTA TTGATTGGCA TGGTTTACGA
    CAATTGCGTT CTCTTGTTGA ATTAGAAATC ACCGCGTGTC CCAGTTTGAG TGATATCCCA
    GAGGATGATT GTGGGTCCCT CAAACTCCTA AAGATACATG GATGGGATAA ACTGAAGAGT
    GTACCACACC AACTTCAACA CCTCACTGCC CTCGAGACAT TGTCTATACG TAATTTCAAT
    GGAGAGGAGT TTGAGGAAGC ATCGCCAGAA TGGTTGGCCA ACCTTTCTTC TCTTCAACGT
    CTCGACTTTT GGAATTGCAA GAATCTCAAG AATATGCCAA GTTCCATTCA ACGCCTCTCC
    AAATTAAAGC ATTTGTCGAT AAGGGGATGT CCACATCTTA ATGAAAATTG TAGAAAGGAG
    AATGGCTCTG AGTGGCCCAA GATTTCTCAT ATCCCAACAA TCTTCATCGA CGGTAGAGGT
    GTACAGGTAT GTTGGGATTT AAATTTCATG TCATTTAATA ATAACCAATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006388077.1
    CDS1..3411
    Translation

    Target ORF information:

    RefSeq Version XM_006388015.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0361s00200g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006388015.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    ATGGCAGCAG AGCTTCTTCT TACGTTTGCC ATGGAGGAGA CTTTGACAAG GGTCAGTTCC 
    ATAGCTGCTG AAGGGATCAG ACTTGCTTGG GGATTGAAGG GCCACCTGCA AAGGCTCGAC
    AAGTCTTCGA AAATGATCCA AGCTGTGCTC CAAGATGCAG CCAGAAAGGC AGTAACAAAC
    GATTCGGCGA GGCTTTGGCT GGAGAGGCTA CAAGATGTAG CTTACGATGC TGAAGATGTT
    CTAGACGAGT TTGCTTATGA GATTCTCCGA AAAGACCAAA AGAAGGGAAA GGTACGTTAC
    TGCTTTTCAC TCCACAACCC TGTCGCATTC CGTCTGAATA TGGGTCAAAA AGTTAAGGAG
    ATCAATGGAG CACTGGATGA AATTCGAAAA GAAGCAGATT TATTTCAATT GACATCTCTA
    CCTGTAGAAG GAGCTCAAGA AGTTAGCAGG GGTCCAAATC GAGAGACACA TTCGTTCCTT
    GACAGCTCAG AAGTTGTAGG AAGGGATGGT GATGTCTCTA AAGTTATGGA ATTGCTGACT
    AGCTTGACCA AACACCAACA TGTCCTTCCG GTTGTCCCTA TAGTGGGGAT GGGTGGCCTC
    GGAAAGACTA CTATAGCAAA AAAAGTTTGT GAAGCAGTGA CGGAGAAAAA GCTTTTTGAT
    GTGACTCTAT GGGTTTGCGC TTCTAATTTT AATAATGTAA AGATTTTAGG AGCAATGTTG
    CAAGTGATTG ACAAAACTAC GGGTGGGTTG GATATTCTTG ATGCAATTCT TCGAAACCTT
    AAGAAAGAGC TGGAAAATAA GACATTTTTT CTTGTTCTTG ATGATGTGTG GAATGAAGCC
    CCTGATAATT GGGATGATTT GAAGGAGCAA CTGTTAACAA TTAACAGCAA GAATGGGAAT
    GCTGTTGTTG TTACAACCCG CAGTAAGAAA GTAGCAGACA TGATGGGGAC TTCTCCTGGG
    ATTCAGCACG AGCCAGGGAG ACTTTCAGAT GATCAATGTT GGTCCATTAT CAAGCAAAAG
    GTGAGCAGTG GTGGGGGAGC AACAATAGCT TCAGACTTGG AGTCTATTGG GAAAGAGATT
    GCAAAGAAAT GTGGAGGGAT TCCATTACTT GCTAATGTTC TGGGAGGAAC TCTTCACGGA
    AAGCAGGCAC AGGAGTGGAA GTCAATTCTA AACAGTGGAA TTTGGGATTC TCAGGATGGA
    AATAAAGCTT TGCGCATATT GAGACTCAGT TTTGATTACG TGTCATCGCC AACATTGAAA
    AAATGTTTTG CATACTGTTC TATTTTTCCT AAAGATTTTG AAATTGATAG GGAAGAGCTC
    ATTCAACTTT GGATGGCTGA AGGTTTTCTC GGGACATCAA CTGGGACGAT GGAAGACGAA
    GGCGACAAGT GTTTCAATGA CTTGCTTGCA AATTCCTTTT TCCAAGATGT TGAAAGGAAC
    GAGCCTGAGA TCGTAACAAG TTGCAAGATG CATGATCTTG TGCATGATCT TGCATTACAG
    GTCTCAAAAT CAGAAGTGTT AAATCTGGAG GAGGATTCGT CTCTTGATGG TGCATCTCAT
    ATTCGTCATC TAAATCTCAT GTCTCGTGTG GATGATGAGG CAGCATTAAC AGCGGTTGAT
    GCTAGAAAAT TGCGAACTGT TTTCTCAAAT GGTGATGTAT TCAATCGGTC TTGGAAATTC
    AAAAGCTTGA GAACTCTCAA ATTGCAGGAA TCTGATATCA CAGAGTTACC AGATTCAATT
    TGCAAGCTGA GACATTTGAG ATATCTTGAT GTCTCGGATA CTGCTATCAA ATCATTGCCG
    GAATCCATCA CCAAGCTCTA CCATTTGGAA ACATTAAGAT TCACTGATTG CAAGTCACTG
    AAAAAGCTTC CCAAGAAAAT GAGGAATTTA GTCAGCTTGA GACATCTTCA TTTTGATGAT
    CCAAAGCTAG TGCCAGATGA GGTGAGACTC TTAACACGCC TTCAAACTCT GCCTTTTTTT
    GTTGTGGGTC CAGATCATAT GGTTGAAGAG CTGGGATGTT TGAATGAACT AAGAGGAGCA
    TTGAAGATAT GCAAGCTTGA GCAAGTTAGA GACAGAGAAG AAGCTGAGAA GGCAGAACTG
    AGTGGAAAAA GAATGAACAA ATTGGTGTTT GAATGGAGTG ATGATGAAGG TAACAGCAGT
    GTCAATAGCG AGGATGTGCT GGAAGGCCTG CAGCCTCACC CAGACATAAG AAGCTTGAAA
    ATTAAGGGTT ATGGAGGTGA AGATTTCTCA TCATGGATAT TGCAACTCAA TAATCTGACG
    GTGCTGAGAT TGAATGGCTG CAGCAAGTTG AGGCAACTCC CAACACTTGG ATGCCTTCCT
    CGCCTTAAGA TTCTAAAGAT ACGTGGAATG CCTAATGTGA AATCTATAGG CAACGAGTTC
    TATAGTAGCA GCGCACCAAA ACTGTTTCCA GCACTAAAAG AACTCTTTTT GCATGGTATG
    GATGGTCTTG AAGAATTGAT GTTACCAGGT GGAGAAGTTG TTGCAGTATT TCCTTGTCTT
    GAAATGTTGA CCATTTGGAT GTGTGGAAAG TTGAAAAGCA TTTCGATATG TCGTCTTTCA
    TCTCTTGTAA AATTTGAAAT TGGCAGTTGT CATGAACTGA GATTTTTGTC TGGTGAGTTT
    GATGGCTTCA CGTCTCTTCA AATTTTAGAG ATATCGTGGT GTCCAAAGCT GGCATCCATT
    CCAAGCGTAC AACACTGCAC AGCTCTGGTG CAATTGGGTA TATGTTGGTG CTGTGAGTCG
    ATCTCAATTC CTGCTCTTCC AAGCGGACTA CAAAGTTGCG CATCTCTAGA GGAATTATCA
    ATAATTAAGT GGAGTGAGCT TATTATCCAT AGCAATGATT TTCAAGAATT GTCTTCGCTT
    CGAACATTAT TGATTAGAGG TTGTGATAAG CTCATCAGTA TTGATTGGCA TGGTTTACGA
    CAATTGCGTT CTCTTGTTGA ATTAGAAATC ACCGCGTGTC CCAGTTTGAG TGATATCCCA
    GAGGATGATT GTGGGTCCCT CAAACTCCTA AAGATACATG GATGGGATAA ACTGAAGAGT
    GTACCACACC AACTTCAACA CCTCACTGCC CTCGAGACAT TGTCTATACG TAATTTCAAT
    GGAGAGGAGT TTGAGGAAGC ATCGCCAGAA TGGTTGGCCA ACCTTTCTTC TCTTCAACGT
    CTCGACTTTT GGAATTGCAA GAATCTCAAG AATATGCCAA GTTCCATTCA ACGCCTCTCC
    AAATTAAAGC ATTTGTCGAT AAGGGGATGT CCACATCTTA ATGAAAATTG TAGAAAGGAG
    AATGGCTCTG AGTGGCCCAA GATTTCTCAT ATCCCAACAA TCTTCATCGA CGGTAGAGGT
    GTACAGGTAT GTTGGGATTT AAATTTCATG TCATTTAATA ATAACCAATA A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D