ORF » Species Summary » Populus trichocarpa » LOC18106064 cDNA ORF clone

LOC18106064 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18106064 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18106064 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa33593 XM_006373584.1
Latest version!		 Populus trichocarpa hypothetical protein (POPTR_0016s02130g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa445807 XM_006373584.2
Latest version!		 Populus trichocarpa protein PAT1 homolog 1 (LOC18106064), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $391.30
$559.00
OPa445808 XM_024588095.1
Latest version!		 Populus trichocarpa protein PAT1 homolog 1 (LOC18106064), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18106064 ( XM_006373584.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006373646.1 Populus trichocarpa hypothetical protein (POPTR_0016s02130g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa33593
    Clone ID Related Accession (Same CDS sequence) XM_006373584.1
    Accession Version XM_006373584.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2367bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008482). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGAGCGAT CTGATGGCAA GGATTTCAAA GAATTCACTG AATCTTCTTC AGGTGCACTC 
    TTTGACGCTT CACAGTACGA ATTTTTTGGT CAACATGCTG TGGAAGAAGT GGAGTTGGGT 
    GGTTTAGAAG ATGAGGGTGA GAATCTTTTG CTCGGGCCCA CCAATGATGA GTACCGTTTG 
    TTTGATAGAG ATGAAGGTGT ATGTTTAGGA TCTTTATCTG AAATTGATGA TCTGGCAAGT 
    ACTTTTGCTA AGTTGAACCG AGTTGTAACT GGACCCAGGA ATCCAGGAGT TATTGGTGAC 
    AGAGGATCTG GATCCTTTTC GAGGGAAAGC TCATCTGCCA CTGATTGGGC ACAAGATGGA 
    GAGTTTACGA GTTGGTTAGA TCAACAAATG TTTAATGCAG AAAATTCTCA GGATAGCAAG 
    AGATGGTCAT CACAGCCCCA ACCTTCTTCT GCTTGTTTCT CAGAATCAAA ACCTTTGTAC 
    AGAACTTCCT CATATCCCCA GCAGCCACAA CAGCTTCAGC ACTTCTCAAG TGAACCAATT 
    CCTGTACCCA AATCAAATTT CACATCTTTC CCTCCTCCTG GTTGTTCGCC ACACCACCTT 
    AATGTTGCTT CTCGTGCTGG TGGACTGCAG TCACACTTGT CTGCCCCGAA TCTGTCTCCT 
    TTGTCAAACT CTAATCTTCA TCTGGCTGGT TTACAGCATG GGTTACATTA TGGTGGAAAT 
    CTGGCCCAGA TCACGTCTCC TGGCCTTTCT TTTAATAACA GGCCACAAAA ACATTGGGTT 
    AATCATGCTG GCTTATTACA TGTAGATCAG TCTAGGCTCT TACAGAGTAT ACTGCAACAA 
    CAATTATCAC ATCAAAATGG CCTATTGTCT TCCCAATTAA TGTCACCACA GCAGCAATTG 
    CAACAGCAGA GACTGCACCC TTCAGTTCAA CCATCTTTGG CTCATTTTGC AGCAATGCAA 
    TCTCAACTCT TTAATGCACA TCCTTCATCA TTACATATCA GGGAACAAAA ACATAAATCA 
    TCCCAAAGAA ACCGGCGCTT TTCACAAGGC TCTGACACTA GTAGTCAGAA AAGTGATGGT 
    GGCTGGGTGC AATTCCGATC CAAGCATATG ACAGCTGATG AAATCGAGAG TATTCTGAAA 
    ATGCAGCATG CTGCTACTCA TAGCAATGAC CCATATATAG ACGATTACTA CCACCAAGCT 
    TCTCTTGCCA AAAGATCTAC TGGGTCGAGA ACTAAAAACA ATTTCTGCCC GTCTCACTTG 
    AAGGAGCTAC CTTCTCGATC TCGTAACAGT GCAGACCAGC ATTCTCATCT CCATTTTGAT 
    GCTCTCGGGA AGATGCCCCT CCCTTCCATA CGGAGGCCTC ATCCCCTTCT TGAAGTTGAT 
    CCTCCTGGTT CTGGTGATGG AAACTCTGAA CAAATGTCTG AGAGGCCTTT GGAACAGGAA 
    CCTATGCTTG CAGCTAGAAT CACCATTGAA GATAGCCTGT CTCTTCTTCT TGATGTAGAT 
    GATATTGACC GTTTCCTGCA GTGTAATCAG CCCCAAGATG GTGGGGCTCA GCTCAGGCGT 
    AGGCGGCAGA ACTTGCTTGA AGGATTGGCA GCGTCACTTC AGCTTGTTGA CCCACTTGGC 
    CAAACTGGCA AAACTGCTGG ACTTGCCTCA AAGGATGACA TTGTGTTCCT GCGGTTAGTA 
    TCACTTCCCA AGGGTCGAAA GCTCATCTGC AAGTTTCTTC AGCTTCTATA TCCCGGGAGT 
    GAACTCACCC GTGTTGTCTG CATGGCTATT TTCCGTCACT TGAGGTTTTT GTTTGGTGGC 
    ATTCCCTCAG ATACAGGAGC AGCTGACACA ACTACAAATC TCACAAAGAC AGTTTCTGCA 
    TGTGTAAGTG GCATGGATCT TCATGCATTG AGTGCTTGCC TTGTAGCCAT AGTTTGTTCT 
    TCAGAGCAGC CACCATTTCG GCCTCTTGGT AGCCCTGCTG GGGATGGAGC CACAGTTATT 
    TTGAAGTGTC TTCTTGAAAG AGCTAGTAAA CTATTACATG GTCCCCAGGC TTCTTCCAAC 
    TGTGGTATGC CCAATTTTGC TCTCTGGCAG GCATCATTTG ATGAATTTTT TGATCTTCTT 
    ATGAAGTACT GCCTGATTAA ATATGACACT ATACTGCAAT CAGTCTATGC AAAGACACCA 
    CCTAGCGCAG AAGGTATTGA TTCAGAGGTG CGTGCAGCAA CAAAACGAGA AATGCCTGTT 
    GAGCTTTTAA GAGCTTGCCT TCCTCATACG AATGAACGCC AGATGGAACT TTTAAGACAT 
    TTTGGGCAGC AACGCAATAC CATTACTGGC CTGAGTGCAC ATCCAGGGAA TAGTGGTCAC 
    ATAAACTCTG AATCAGTGAG GAGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006373646.1
    CDS308..2674
    Translation

    Target ORF information:

    RefSeq Version XM_006373584.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0016s02130g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006373584.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGAGCGAT CTGATGGCAA GGATTTCAAA GAATTCACTG AATCTTCTTC AGGTGCACTC 
    TTTGACGCTT CACAGTACGA ATTTTTTGGT CAACATGCTG TGGAAGAAGT GGAGTTGGGT 
    GGTTTAGAAG ATGAGGGTGA GAATCTTTTG CTCGGGCCCA CCAATGATGA GTACCGTTTG 
    TTTGATAGAG ATGAAGGTGT ATGTTTAGGA TCTTTATCTG AAATTGATGA TCTGGCAAGT 
    ACTTTTGCTA AGTTGAACCG AGTTGTAACT GGACCCAGGA ATCCAGGAGT TATTGGTGAC 
    AGAGGATCTG GATCCTTTTC GAGGGAAAGC TCATCTGCCA CTGATTGGGC ACAAGATGGA 
    GAGTTTACGA GTTGGTTAGA TCAACAAATG TTTAATGCAG AAAATTCTCA GGATAGCAAG 
    AGATGGTCAT CACAGCCCCA ACCTTCTTCT GCTTGTTTCT CAGAATCAAA ACCTTTGTAC 
    AGAACTTCCT CATATCCCCA GCAGCCACAA CAGCTTCAGC ACTTCTCAAG TGAACCAATT 
    CCTGTACCCA AATCAAATTT CACATCTTTC CCTCCTCCTG GTTGTTCGCC ACACCACCTT 
    AATGTTGCTT CTCGTGCTGG TGGACTGCAG TCACACTTGT CTGCCCCGAA TCTGTCTCCT 
    TTGTCAAACT CTAATCTTCA TCTGGCTGGT TTACAGCATG GGTTACATTA TGGTGGAAAT 
    CTGGCCCAGA TCACGTCTCC TGGCCTTTCT TTTAATAACA GGCCACAAAA ACATTGGGTT 
    AATCATGCTG GCTTATTACA TGTAGATCAG TCTAGGCTCT TACAGAGTAT ACTGCAACAA 
    CAATTATCAC ATCAAAATGG CCTATTGTCT TCCCAATTAA TGTCACCACA GCAGCAATTG 
    CAACAGCAGA GACTGCACCC TTCAGTTCAA CCATCTTTGG CTCATTTTGC AGCAATGCAA 
    TCTCAACTCT TTAATGCACA TCCTTCATCA TTACATATCA GGGAACAAAA ACATAAATCA 
    TCCCAAAGAA ACCGGCGCTT TTCACAAGGC TCTGACACTA GTAGTCAGAA AAGTGATGGT 
    GGCTGGGTGC AATTCCGATC CAAGCATATG ACAGCTGATG AAATCGAGAG TATTCTGAAA 
    ATGCAGCATG CTGCTACTCA TAGCAATGAC CCATATATAG ACGATTACTA CCACCAAGCT 
    TCTCTTGCCA AAAGATCTAC TGGGTCGAGA ACTAAAAACA ATTTCTGCCC GTCTCACTTG 
    AAGGAGCTAC CTTCTCGATC TCGTAACAGT GCAGACCAGC ATTCTCATCT CCATTTTGAT 
    GCTCTCGGGA AGATGCCCCT CCCTTCCATA CGGAGGCCTC ATCCCCTTCT TGAAGTTGAT 
    CCTCCTGGTT CTGGTGATGG AAACTCTGAA CAAATGTCTG AGAGGCCTTT GGAACAGGAA 
    CCTATGCTTG CAGCTAGAAT CACCATTGAA GATAGCCTGT CTCTTCTTCT TGATGTAGAT 
    GATATTGACC GTTTCCTGCA GTGTAATCAG CCCCAAGATG GTGGGGCTCA GCTCAGGCGT 
    AGGCGGCAGA ACTTGCTTGA AGGATTGGCA GCGTCACTTC AGCTTGTTGA CCCACTTGGC 
    CAAACTGGCA AAACTGCTGG ACTTGCCTCA AAGGATGACA TTGTGTTCCT GCGGTTAGTA 
    TCACTTCCCA AGGGTCGAAA GCTCATCTGC AAGTTTCTTC AGCTTCTATA TCCCGGGAGT 
    GAACTCACCC GTGTTGTCTG CATGGCTATT TTCCGTCACT TGAGGTTTTT GTTTGGTGGC 
    ATTCCCTCAG ATACAGGAGC AGCTGACACA ACTACAAATC TCACAAAGAC AGTTTCTGCA 
    TGTGTAAGTG GCATGGATCT TCATGCATTG AGTGCTTGCC TTGTAGCCAT AGTTTGTTCT 
    TCAGAGCAGC CACCATTTCG GCCTCTTGGT AGCCCTGCTG GGGATGGAGC CACAGTTATT 
    TTGAAGTGTC TTCTTGAAAG AGCTAGTAAA CTATTACATG GTCCCCAGGC TTCTTCCAAC 
    TGTGGTATGC CCAATTTTGC TCTCTGGCAG GCATCATTTG ATGAATTTTT TGATCTTCTT 
    ATGAAGTACT GCCTGATTAA ATATGACACT ATACTGCAAT CAGTCTATGC AAAGACACCA 
    CCTAGCGCAG AAGGTATTGA TTCAGAGGTG CGTGCAGCAA CAAAACGAGA AATGCCTGTT 
    GAGCTTTTAA GAGCTTGCCT TCCTCATACG AATGAACGCC AGATGGAACT TTTAAGACAT 
    TTTGGGCAGC AACGCAATAC CATTACTGGC CTGAGTGCAC ATCCAGGGAA TAGTGGTCAC 
    ATAAACTCTG AATCAGTGAG GAGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18106064 ( XM_006373584.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006373646.2 Populus trichocarpa protein PAT1 homolog 1 (LOC18106064), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa445807
    Clone ID Related Accession (Same CDS sequence) XM_006373584.2
    Accession Version XM_006373584.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 2367bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product protein PAT1 homolog 1 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037300.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006373584.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGAGCGAT CTGATGGCAA GGATTTCAAA GAATTCACTG AATCTTCTTC AGGTGCACTC 
    TTTGACGCTT CACAGTACGA ATTTTTTGGT CAACATGCTG TGGAAGAAGT GGAGTTGGGT 
    GGTTTAGAAG ATGAGGGTGA GAATCTTTTG CTCGGGCCCA CCAATGATGA GTACCGTTTG 
    TTTGATAGAG ATGAAGGTGT ATGTTTAGGA TCTTTATCTG AAATTGATGA TCTGGCAAGT 
    ACTTTTGCTA AGTTGAACCG AGTTGTAACT GGACCCAGGA ATCCAGGAGT TATTGGTGAC 
    AGAGGATCTG GATCCTTTTC GAGGGAAAGC TCATCTGCCA CTGATTGGGC ACAAGATGGA 
    GAGTTTACGA GTTGGTTAGA TCAACAAATG TTTAATGCAG AAAATTCTCA GGATAGCAAG 
    AGATGGTCAT CACAGCCCCA ACCTTCTTCT GCTTGTTTCT CAGAATCAAA ACCTTTGTAC 
    AGAACTTCCT CATATCCCCA GCAGCCACAA CAGCTTCAGC ACTTCTCAAG TGAACCAATT 
    CCTGTACCCA AATCAAATTT CACATCTTTC CCTCCTCCTG GTTGTTCGCC ACACCACCTT 
    AATGTTGCTT CTCGTGCTGG TGGACTGCAG TCACACTTGT CTGCCCCGAA TCTGTCTCCT 
    TTGTCAAACT CTAATCTTCA TCTGGCTGGT TTACAGCATG GGTTACATTA TGGTGGAAAT 
    CTGGCCCAGA TCACGTCTCC TGGCCTTTCT TTTAATAACA GGCCACAAAA ACATTGGGTT 
    AATCATGCTG GCTTATTACA TGTAGATCAG TCTAGGCTCT TACAGAGTAT ACTGCAACAA 
    CAATTATCAC ATCAAAATGG CCTATTGTCT TCCCAATTAA TGTCACCACA GCAGCAATTG 
    CAACAGCAGA GACTGCACCC TTCAGTTCAA CCATCTTTGG CTCATTTTGC AGCAATGCAA 
    TCTCAACTCT TTAATGCACA TCCTTCATCA TTACATATCA GGGAACAAAA ACATAAATCA 
    TCCCAAAGAA ACCGGCGCTT TTCACAAGGC TCTGACACTA GTAGTCAGAA AAGTGATGGT 
    GGCTGGGTGC AATTCCGATC CAAGCATATG ACAGCTGATG AAATCGAGAG TATTCTGAAA 
    ATGCAGCATG CTGCTACTCA TAGCAATGAC CCATATATAG ACGATTACTA CCACCAAGCT 
    TCTCTTGCCA AAAGATCTAC TGGGTCGAGA ACTAAAAACA ATTTCTGCCC GTCTCACTTG 
    AAGGAGCTAC CTTCTCGATC TCGTAACAGT GCAGACCAGC ATTCTCATCT CCATTTTGAT 
    GCTCTCGGGA AGATGCCCCT CCCTTCCATA CGGAGGCCTC ATCCCCTTCT TGAAGTTGAT 
    CCTCCTGGTT CTGGTGATGG AAACTCTGAA CAAATGTCTG AGAGGCCTTT GGAACAGGAA 
    CCTATGCTTG CAGCTAGAAT CACCATTGAA GATAGCCTGT CTCTTCTTCT TGATGTAGAT 
    GATATTGACC GTTTCCTGCA GTGTAATCAG CCCCAAGATG GTGGGGCTCA GCTCAGGCGT 
    AGGCGGCAGA ACTTGCTTGA AGGATTGGCA GCGTCACTTC AGCTTGTTGA CCCACTTGGC 
    CAAACTGGCA AAACTGCTGG ACTTGCCTCA AAGGATGACA TTGTGTTCCT GCGGTTAGTA 
    TCACTTCCCA AGGGTCGAAA GCTCATCTGC AAGTTTCTTC AGCTTCTGTA TCCCGGGAGT 
    GAACTCACCC GTGTTGTCTG CATGGCTATT TTCCGTCACT TGAGGTTTTT GTTTGGTGGC 
    ATTCCCTCAG ATACGGGAGC AGCTGACACA ACTACAAATC TCACAAAGAC AGTTTCTGCA 
    TGTGTAAGTG GCATGGATCT TCATGCATTG AGTGCTTGCC TTGTAGCCAT AGTTTGTTCT 
    TCAGAGCAGC CACCATTTCG GCCTCTTGGT AGCCCTGCTG GGGATGGAGC CACAGTTATT 
    TTGAAGTGTC TTCTTGAAAG AGCTAGTAAA CTATTACATG GTCCCCAGGC TTCTGCCAAC 
    TGTGGTATGC CCAATTTTGC TCTCTGGCAG GCATCATTTG ATGAATTTTT TGATCTTCTT 
    ATGAAGTACT GCCTGATTAA ATATGACACT ATACTGCAAT CAGTCTATGC AAAGACACCA 
    CCTAGCGCAG AAGGTATTGA TTCAGAGGTG CGTGCAGCAA CAAAACGAGA AATGCCTGTT 
    GAGCTTTTAA GAGCTTGCCT TCCTCATACG AATGAACGCC AGATGGAACT TTTAAGACAT 
    TTTGGGCAGC AACGCAATAC CATTACTGGC CTGAGTGCAC ATCCAGGGAA TAGTGGTCAC 
    ATAAACTCTG AATCAGTGAG GAGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006373646.2
    CDS325..2691
    Translation

    Target ORF information:

    RefSeq Version XM_006373584.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein PAT1 homolog 1 (LOC18106064), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006373584.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    ATGGAGCGAT CTGATGGCAA GGATTTCAAA GAATTCACTG AATCTTCTTC AGGTGCACTC 
    TTTGACGCTT CACAGTACGA ATTTTTTGGT CAACATGCTG TGGAAGAAGT GGAGTTGGGT 
    GGTTTAGAAG ATGAGGGTGA GAATCTTTTG CTCGGGCCCA CCAATGATGA GTACCGTTTG 
    TTTGATAGAG ATGAAGGTGT ATGTTTAGGA TCTTTATCTG AAATTGATGA TCTGGCAAGT 
    ACTTTTGCTA AGTTGAACCG AGTTGTAACT GGACCCAGGA ATCCAGGAGT TATTGGTGAC 
    AGAGGATCTG GATCCTTTTC GAGGGAAAGC TCATCTGCCA CTGATTGGGC ACAAGATGGA 
    GAGTTTACGA GTTGGTTAGA TCAACAAATG TTTAATGCAG AAAATTCTCA GGATAGCAAG 
    AGATGGTCAT CACAGCCCCA ACCTTCTTCT GCTTGTTTCT CAGAATCAAA ACCTTTGTAC 
    AGAACTTCCT CATATCCCCA GCAGCCACAA CAGCTTCAGC ACTTCTCAAG TGAACCAATT 
    CCTGTACCCA AATCAAATTT CACATCTTTC CCTCCTCCTG GTTGTTCGCC ACACCACCTT 
    AATGTTGCTT CTCGTGCTGG TGGACTGCAG TCACACTTGT CTGCCCCGAA TCTGTCTCCT 
    TTGTCAAACT CTAATCTTCA TCTGGCTGGT TTACAGCATG GGTTACATTA TGGTGGAAAT 
    CTGGCCCAGA TCACGTCTCC TGGCCTTTCT TTTAATAACA GGCCACAAAA ACATTGGGTT 
    AATCATGCTG GCTTATTACA TGTAGATCAG TCTAGGCTCT TACAGAGTAT ACTGCAACAA 
    CAATTATCAC ATCAAAATGG CCTATTGTCT TCCCAATTAA TGTCACCACA GCAGCAATTG 
    CAACAGCAGA GACTGCACCC TTCAGTTCAA CCATCTTTGG CTCATTTTGC AGCAATGCAA 
    TCTCAACTCT TTAATGCACA TCCTTCATCA TTACATATCA GGGAACAAAA ACATAAATCA 
    TCCCAAAGAA ACCGGCGCTT TTCACAAGGC TCTGACACTA GTAGTCAGAA AAGTGATGGT 
    GGCTGGGTGC AATTCCGATC CAAGCATATG ACAGCTGATG AAATCGAGAG TATTCTGAAA 
    ATGCAGCATG CTGCTACTCA TAGCAATGAC CCATATATAG ACGATTACTA CCACCAAGCT 
    TCTCTTGCCA AAAGATCTAC TGGGTCGAGA ACTAAAAACA ATTTCTGCCC GTCTCACTTG 
    AAGGAGCTAC CTTCTCGATC TCGTAACAGT GCAGACCAGC ATTCTCATCT CCATTTTGAT 
    GCTCTCGGGA AGATGCCCCT CCCTTCCATA CGGAGGCCTC ATCCCCTTCT TGAAGTTGAT 
    CCTCCTGGTT CTGGTGATGG AAACTCTGAA CAAATGTCTG AGAGGCCTTT GGAACAGGAA 
    CCTATGCTTG CAGCTAGAAT CACCATTGAA GATAGCCTGT CTCTTCTTCT TGATGTAGAT 
    GATATTGACC GTTTCCTGCA GTGTAATCAG CCCCAAGATG GTGGGGCTCA GCTCAGGCGT 
    AGGCGGCAGA ACTTGCTTGA AGGATTGGCA GCGTCACTTC AGCTTGTTGA CCCACTTGGC 
    CAAACTGGCA AAACTGCTGG ACTTGCCTCA AAGGATGACA TTGTGTTCCT GCGGTTAGTA 
    TCACTTCCCA AGGGTCGAAA GCTCATCTGC AAGTTTCTTC AGCTTCTGTA TCCCGGGAGT 
    GAACTCACCC GTGTTGTCTG CATGGCTATT TTCCGTCACT TGAGGTTTTT GTTTGGTGGC 
    ATTCCCTCAG ATACGGGAGC AGCTGACACA ACTACAAATC TCACAAAGAC AGTTTCTGCA 
    TGTGTAAGTG GCATGGATCT TCATGCATTG AGTGCTTGCC TTGTAGCCAT AGTTTGTTCT 
    TCAGAGCAGC CACCATTTCG GCCTCTTGGT AGCCCTGCTG GGGATGGAGC CACAGTTATT 
    TTGAAGTGTC TTCTTGAAAG AGCTAGTAAA CTATTACATG GTCCCCAGGC TTCTGCCAAC 
    TGTGGTATGC CCAATTTTGC TCTCTGGCAG GCATCATTTG ATGAATTTTT TGATCTTCTT 
    ATGAAGTACT GCCTGATTAA ATATGACACT ATACTGCAAT CAGTCTATGC AAAGACACCA 
    CCTAGCGCAG AAGGTATTGA TTCAGAGGTG CGTGCAGCAA CAAAACGAGA AATGCCTGTT 
    GAGCTTTTAA GAGCTTGCCT TCCTCATACG AATGAACGCC AGATGGAACT TTTAAGACAT 
    TTTGGGCAGC AACGCAATAC CATTACTGGC CTGAGTGCAC ATCCAGGGAA TAGTGGTCAC 
    ATAAACTCTG AATCAGTGAG GAGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18106064 ( XM_024588095.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_024443863.1 Populus trichocarpa protein PAT1 homolog 1 (LOC18106064), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OPa445808
    Clone ID Related Accession (Same CDS sequence) XM_024588095.1
    Accession Version XM_024588095.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1980bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product protein PAT1 homolog 1 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037300.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    ATGTTTAATG CAGAAAATTC TCAGGATAGC AAGAGATGGT CATCACAGCC CCAACCTTCT 
    TCTGCTTGTT TCTCAGAATC AAAACCTTTG TACAGAACTT CCTCATATCC CCAGCAGCCA 
    CAACAGCTTC AGCACTTCTC AAGTGAACCA ATTCCTGTAC CCAAATCAAA TTTCACATCT 
    TTCCCTCCTC CTGGTTGTTC GCCACACCAC CTTAATGTTG CTTCTCGTGC TGGTGGACTG 
    CAGTCACACT TGTCTGCCCC GAATCTGTCT CCTTTGTCAA ACTCTAATCT TCATCTGGCT 
    GGTTTACAGC ATGGGTTACA TTATGGTGGA AATCTGGCCC AGATCACGTC TCCTGGCCTT 
    TCTTTTAATA ACAGGCCACA AAAACATTGG GTTAATCATG CTGGCTTATT ACATGTAGAT 
    CAGTCTAGGC TCTTACAGAG TATACTGCAA CAACAATTAT CACATCAAAA TGGCCTATTG 
    TCTTCCCAAT TAATGTCACC ACAGCAGCAA TTGCAACAGC AGAGACTGCA CCCTTCAGTT 
    CAACCATCTT TGGCTCATTT TGCAGCAATG CAATCTCAAC TCTTTAATGC ACATCCTTCA 
    TCATTACATA TCAGGGAACA AAAACATAAA TCATCCCAAA GAAACCGGCG CTTTTCACAA 
    GGCTCTGACA CTAGTAGTCA GAAAAGTGAT GGTGGCTGGG TGCAATTCCG ATCCAAGCAT 
    ATGACAGCTG ATGAAATCGA GAGTATTCTG AAAATGCAGC ATGCTGCTAC TCATAGCAAT 
    GACCCATATA TAGACGATTA CTACCACCAA GCTTCTCTTG CCAAAAGATC TACTGGGTCG 
    AGAACTAAAA ACAATTTCTG CCCGTCTCAC TTGAAGGAGC TACCTTCTCG ATCTCGTAAC 
    AGTGCAGACC AGCATTCTCA TCTCCATTTT GATGCTCTCG GGAAGATGCC CCTCCCTTCC 
    ATACGGAGGC CTCATCCCCT TCTTGAAGTT GATCCTCCTG GTTCTGGTGA TGGAAACTCT 
    GAACAAATGT CTGAGAGGCC TTTGGAACAG GAACCTATGC TTGCAGCTAG AATCACCATT 
    GAAGATAGCC TGTCTCTTCT TCTTGATGTA GATGATATTG ACCGTTTCCT GCAGTGTAAT 
    CAGCCCCAAG ATGGTGGGGC TCAGCTCAGG CGTAGGCGGC AGAACTTGCT TGAAGGATTG 
    GCAGCGTCAC TTCAGCTTGT TGACCCACTT GGCCAAACTG GCAAAACTGC TGGACTTGCC 
    TCAAAGGATG ACATTGTGTT CCTGCGGTTA GTATCACTTC CCAAGGGTCG AAAGCTCATC 
    TGCAAGTTTC TTCAGCTTCT GTATCCCGGG AGTGAACTCA CCCGTGTTGT CTGCATGGCT 
    ATTTTCCGTC ACTTGAGGTT TTTGTTTGGT GGCATTCCCT CAGATACGGG AGCAGCTGAC 
    ACAACTACAA ATCTCACAAA GACAGTTTCT GCATGTGTAA GTGGCATGGA TCTTCATGCA 
    TTGAGTGCTT GCCTTGTAGC CATAGTTTGT TCTTCAGAGC AGCCACCATT TCGGCCTCTT 
    GGTAGCCCTG CTGGGGATGG AGCCACAGTT ATTTTGAAGT GTCTTCTTGA AAGAGCTAGT 
    AAACTATTAC ATGGTCCCCA GGCTTCTGCC AACTGTGGTA TGCCCAATTT TGCTCTCTGG 
    CAGGCATCAT TTGATGAATT TTTTGATCTT CTTATGAAGT ACTGCCTGAT TAAATATGAC 
    ACTATACTGC AATCAGTCTA TGCAAAGACA CCACCTAGCG CAGAAGGTAT TGATTCAGAG 
    GTGCGTGCAG CAACAAAACG AGAAATGCCT GTTGAGCTTT TAAGAGCTTG CCTTCCTCAT 
    ACGAATGAAC GCCAGATGGA ACTTTTAAGA CATTTTGGGC AGCAACGCAA TACCATTACT 
    GGCCTGAGTG CACATCCAGG GAATAGTGGT CACATAAACT CTGAATCAGT GAGGAGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024443863.1
    CDS177..2156
    Translation

    Target ORF information:

    RefSeq Version XM_024588095.1
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa protein PAT1 homolog 1 (LOC18106064), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_024588095.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    ATGTTTAATG CAGAAAATTC TCAGGATAGC AAGAGATGGT CATCACAGCC CCAACCTTCT 
    TCTGCTTGTT TCTCAGAATC AAAACCTTTG TACAGAACTT CCTCATATCC CCAGCAGCCA 
    CAACAGCTTC AGCACTTCTC AAGTGAACCA ATTCCTGTAC CCAAATCAAA TTTCACATCT 
    TTCCCTCCTC CTGGTTGTTC GCCACACCAC CTTAATGTTG CTTCTCGTGC TGGTGGACTG 
    CAGTCACACT TGTCTGCCCC GAATCTGTCT CCTTTGTCAA ACTCTAATCT TCATCTGGCT 
    GGTTTACAGC ATGGGTTACA TTATGGTGGA AATCTGGCCC AGATCACGTC TCCTGGCCTT 
    TCTTTTAATA ACAGGCCACA AAAACATTGG GTTAATCATG CTGGCTTATT ACATGTAGAT 
    CAGTCTAGGC TCTTACAGAG TATACTGCAA CAACAATTAT CACATCAAAA TGGCCTATTG 
    TCTTCCCAAT TAATGTCACC ACAGCAGCAA TTGCAACAGC AGAGACTGCA CCCTTCAGTT 
    CAACCATCTT TGGCTCATTT TGCAGCAATG CAATCTCAAC TCTTTAATGC ACATCCTTCA 
    TCATTACATA TCAGGGAACA AAAACATAAA TCATCCCAAA GAAACCGGCG CTTTTCACAA 
    GGCTCTGACA CTAGTAGTCA GAAAAGTGAT GGTGGCTGGG TGCAATTCCG ATCCAAGCAT 
    ATGACAGCTG ATGAAATCGA GAGTATTCTG AAAATGCAGC ATGCTGCTAC TCATAGCAAT 
    GACCCATATA TAGACGATTA CTACCACCAA GCTTCTCTTG CCAAAAGATC TACTGGGTCG 
    AGAACTAAAA ACAATTTCTG CCCGTCTCAC TTGAAGGAGC TACCTTCTCG ATCTCGTAAC 
    AGTGCAGACC AGCATTCTCA TCTCCATTTT GATGCTCTCG GGAAGATGCC CCTCCCTTCC 
    ATACGGAGGC CTCATCCCCT TCTTGAAGTT GATCCTCCTG GTTCTGGTGA TGGAAACTCT 
    GAACAAATGT CTGAGAGGCC TTTGGAACAG GAACCTATGC TTGCAGCTAG AATCACCATT 
    GAAGATAGCC TGTCTCTTCT TCTTGATGTA GATGATATTG ACCGTTTCCT GCAGTGTAAT 
    CAGCCCCAAG ATGGTGGGGC TCAGCTCAGG CGTAGGCGGC AGAACTTGCT TGAAGGATTG 
    GCAGCGTCAC TTCAGCTTGT TGACCCACTT GGCCAAACTG GCAAAACTGC TGGACTTGCC 
    TCAAAGGATG ACATTGTGTT CCTGCGGTTA GTATCACTTC CCAAGGGTCG AAAGCTCATC 
    TGCAAGTTTC TTCAGCTTCT GTATCCCGGG AGTGAACTCA CCCGTGTTGT CTGCATGGCT 
    ATTTTCCGTC ACTTGAGGTT TTTGTTTGGT GGCATTCCCT CAGATACGGG AGCAGCTGAC 
    ACAACTACAA ATCTCACAAA GACAGTTTCT GCATGTGTAA GTGGCATGGA TCTTCATGCA 
    TTGAGTGCTT GCCTTGTAGC CATAGTTTGT TCTTCAGAGC AGCCACCATT TCGGCCTCTT 
    GGTAGCCCTG CTGGGGATGG AGCCACAGTT ATTTTGAAGT GTCTTCTTGA AAGAGCTAGT 
    AAACTATTAC ATGGTCCCCA GGCTTCTGCC AACTGTGGTA TGCCCAATTT TGCTCTCTGG 
    CAGGCATCAT TTGATGAATT TTTTGATCTT CTTATGAAGT ACTGCCTGAT TAAATATGAC 
    ACTATACTGC AATCAGTCTA TGCAAAGACA CCACCTAGCG CAGAAGGTAT TGATTCAGAG 
    GTGCGTGCAG CAACAAAACG AGAAATGCCT GTTGAGCTTT TAAGAGCTTG CCTTCCTCAT 
    ACGAATGAAC GCCAGATGGA ACTTTTAAGA CATTTTGGGC AGCAACGCAA TACCATTACT 
    GGCCTGAGTG CACATCCAGG GAATAGTGGT CACATAAACT CTGAATCAGT GAGGAGTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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