ORF » Species Summary » Populus trichocarpa » POPTR_0010s07790g cDNA ORF clone

POPTR_0010s07790g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0010s07790g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0010s07790g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa24415 XM_006378258.2
Latest version!		 Populus trichocarpa heterogeneous nuclear ribonucleoprotein 1 (LOC18102461), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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OPa24415 XM_006378258.1 Populus trichocarpa hypothetical protein (POPTR_0010s07790g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    POPTR_0010s07790g ( XM_006378258.2 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006378320.1 Populus trichocarpa heterogeneous nuclear ribonucleoprotein 1 (LOC18102461), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OPa24415
    Clone ID Related Accession (Same CDS sequence) XM_006378258.2 , XM_006378258.1
    Accession Version XM_006378258.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1380bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product heterogeneous nuclear ribonucleoprotein 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037294.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006378258.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGATTCAG ATCAGGGAAA GCTATTTATT GGAGGGATTT CGTGGGAGAC ATCAGAGGAG 
    AAGCTCAGAG ACTACTTTGG GCAATACGGG GACGTTTTGC AGGCTGTCGT TATGAAAGAT 
    AAGACTACTG GTAGACCTAG AGGCTTTGGC TTTGTCGTCT TTGCAGATCC TGCCGTGCTT 
    GATATGGTTC TTCAAGATAA GCACACCATT GATGGTAGAA TGGTTGAGGC AAAGAGGGCC 
    TTATCAAGAG AGGAGCAGCA AACCAATGCC AGGGCCGGAA ACCTGAATCC TGCTAGAAAC 
    ACCAGCGGTG GTGGAAATAT TCGGACCAAG AAGATATTTG TTGGAGGATT GCCTCCCACT 
    CTAACTGAAG ATGGATTTCG TCAGTATTTT GAAGCCTTTG GCTTTGTTGC TGATGTAGTA 
    ATAATGTATG ACCAGAGCAC CCAGCGACCT CGTGGATTTG GCTTTATTTC TTTTGACACT 
    GAAGATGCAG TTGACCGGGT GTTACAGAGA TCGTTCCATG ATTTGAACGG TAAGCAAGTT 
    GAAGTGAAAC GGGCTCTTCC TAAAGAGGCC AATCCTGGTG GGGGTGGCCG CTCCATGGGT 
    GGCAGTTACC AGAACTATGG TGCATCTGGT GGCAACACAA GCTCATATGA TGGTCGAATG 
    GAGAGGTATA TGCAGCCTCA AGGTACTGGA GGTGGTTTTC CTCCTTATGG CTCATCTGGC 
    TATAGCACAG CTGGATATGG ATATGGTCCT GCCACTAATG GTGTTGGTTA TGGTGGTTAT 
    AGCGGCTATA CTGGAGCTGG AGCTGGTTAT GGGGGACCTG CAGGTGCAGC TTATGGGAAT 
    CCTAATGTTC CAAATGCTGG CTATGTAAGT GGTGCACCTG GTGCACCCAG AAGTTCATGG 
    AACAGTCAAG GTTCATCTGG CTATGGTGCT ATGGGTTATG GGAATGCTGG TTCTTGGGGC 
    GCTCAAAATG CTGGGGCTGG CAGTGGTGGC CCTGGTTCAG TACCTGCTGG TCAATCTCCT 
    GGTGGAGCCG CTGGGTATGG GAATCAAGGT TATGGGTACA GTAGTTACGG TGGAAATGAT 
    GGATCATATG GGAATCCAGC TGGGTATGGT GCTGTTGGAG GACGTTCTGG GGGCACTCCA 
    AACAGTAATG TTGGTGGTCC TGGTGGAGCA GAACTACAGG GGAGTGGCGG TGGCTACATG 
    GGGAGTGGAT ATGGTGATGC AAATGGAAAT TCTGGGTATG GAAATGCAGC GTGGAGATCT 
    GAGCAATCAC AAGCTTCTGG AAATTATGGG GCTCCTCAAG CAAATGGTCC TCATGGTGGA 
    CAGGTTGGAT ATGGTGGTGG TTATGGTAGT TCTCAGGCTC GAAAAGCCCA ACAACAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378320.1
    CDS227..1606
    Translation

    Target ORF information:

    RefSeq Version XM_006378258.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa heterogeneous nuclear ribonucleoprotein 1 (LOC18102461), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378258.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGATTCAG ATCAGGGAAA GCTATTTATT GGAGGGATTT CGTGGGAGAC ATCAGAGGAG 
    AAGCTCAGAG ACTACTTTGG GCAATACGGG GACGTTTTGC AGGCTGTCGT TATGAAAGAT 
    AAGACTACTG GTAGACCTAG AGGCTTTGGC TTTGTCGTCT TTGCAGATCC TGCCGTGCTT 
    GATATGGTTC TTCAAGATAA GCACACCATT GATGGTAGAA TGGTTGAGGC AAAGAGGGCC 
    TTATCAAGAG AGGAGCAGCA AACCAATGCC AGGGCCGGAA ACCTGAATCC TGCTAGAAAC 
    ACCAGCGGTG GTGGAAATAT TCGGACCAAG AAGATATTTG TTGGAGGATT GCCTCCCACT 
    CTAACTGAAG ATGGATTTCG TCAGTATTTT GAAGCCTTTG GCTTTGTTGC TGATGTAGTA 
    ATAATGTATG ACCAGAGCAC CCAGCGACCT CGTGGATTTG GCTTTATTTC TTTTGACACT 
    GAAGATGCAG TTGACCGGGT GTTACAGAGA TCGTTCCATG ATTTGAACGG TAAGCAAGTT 
    GAAGTGAAAC GGGCTCTTCC TAAAGAGGCC AATCCTGGTG GGGGTGGCCG CTCCATGGGT 
    GGCAGTTACC AGAACTATGG TGCATCTGGT GGCAACACAA GCTCATATGA TGGTCGAATG 
    GAGAGGTATA TGCAGCCTCA AGGTACTGGA GGTGGTTTTC CTCCTTATGG CTCATCTGGC 
    TATAGCACAG CTGGATATGG ATATGGTCCT GCCACTAATG GTGTTGGTTA TGGTGGTTAT 
    AGCGGCTATA CTGGAGCTGG AGCTGGTTAT GGGGGACCTG CAGGTGCAGC TTATGGGAAT 
    CCTAATGTTC CAAATGCTGG CTATGTAAGT GGTGCACCTG GTGCACCCAG AAGTTCATGG 
    AACAGTCAAG GTTCATCTGG CTATGGTGCT ATGGGTTATG GGAATGCTGG TTCTTGGGGC 
    GCTCAAAATG CTGGGGCTGG CAGTGGTGGC CCTGGTTCAG TACCTGCTGG TCAATCTCCT 
    GGTGGAGCCG CTGGGTATGG GAATCAAGGT TATGGGTACA GTAGTTACGG TGGAAATGAT 
    GGATCATATG GGAATCCAGC TGGGTATGGT GCTGTTGGAG GACGTTCTGG GGGCACTCCA 
    AACAGTAATG TTGGTGGTCC TGGTGGAGCA GAACTACAGG GGAGTGGCGG TGGCTACATG 
    GGGAGTGGAT ATGGTGATGC AAATGGAAAT TCTGGGTATG GAAATGCAGC GTGGAGATCT 
    GAGCAATCAC AAGCTTCTGG AAATTATGGG GCTCCTCAAG CAAATGGTCC TCATGGTGGA 
    CAGGTTGGAT ATGGTGGTGG TTATGGTAGT TCTCAGGCTC GAAAAGCCCA ACAACAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    POPTR_0010s07790g ( XM_006378258.1 ) cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa) -> XP_006378320.1 Populus trichocarpa hypothetical protein (POPTR_0010s07790g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa24415
    Clone ID Related Accession (Same CDS sequence) XM_006378258.2 , XM_006378258.1
    Accession Version XM_006378258.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1380bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008476). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGATTCAG ATCAGGGAAA GCTATTTATT GGAGGGATTT CGTGGGAGAC ATCAGAGGAG 
    AAGCTCAGAG ACTACTTTGG GCAATACGGG GACGTTTTGC AGGCTGTCGT TATGAAAGAT 
    AAGACTACTG GTAGACCTAG AGGCTTTGGC TTTGTCGTCT TTGCAGATCC TGCCGTGCTT 
    GATATGGTTC TTCAAGATAA GCACACCATT GATGGTAGAA TGGTTGAGGC AAAGAGGGCC 
    TTATCAAGAG AGGAGCAGCA AACCAATGCC AGGGCCGGAA ACCTGAATCC TGCTAGAAAC 
    ACCAGCGGTG GTGGAAATAT TCGGACCAAG AAGATATTTG TTGGAGGATT GCCTCCCACT 
    CTAACTGAAG ATGGATTTCG TCAGTATTTT GAAGCCTTTG GCTTTGTTGC TGATGTAGTA 
    ATAATGTATG ACCAGAGCAC CCAGCGACCT CGTGGATTTG GCTTTATTTC TTTTGACACT 
    GAAGATGCAG TTGACCGGGT GTTACAGAGA TCGTTCCATG ATTTGAACGG TAAGCAAGTT 
    GAAGTGAAAC GGGCTCTTCC TAAAGAGGCC AATCCTGGTG GGGGTGGCCG CTCCATGGGT 
    GGCAGTTACC AGAACTATGG TGCATCTGGT GGCAACACAA GCTCATATGA TGGTCGAATG 
    GAGAGGTATA TGCAGCCTCA AGGTACTGGA GGTGGTTTTC CTCCTTATGG CTCATCTGGC 
    TATAGCACAG CTGGATATGG ATATGGTCCT GCCACTAATG GTGTTGGTTA TGGTGGTTAT 
    AGCGGCTATA CTGGAGCTGG AGCTGGTTAT GGGGGACCTG CAGGTGCAGC TTATGGGAAT 
    CCTAATGTTC CAAATGCTGG CTATGTAAGT GGTGCACCTG GTGCACCCAG AAGTTCATGG 
    AACAGTCAAG GTTCATCTGG CTATGGTGCT ATGGGTTATG GGAATGCTGG TTCTTGGGGC 
    GCTCAAAATG CTGGGGCTGG CAGTGGTGGC CCTGGTTCAG TACCTGCTGG TCAATCTCCT 
    GGTGGAGCCG CTGGGTATGG GAATCAAGGT TATGGGTACA GTAGTTACGG TGGAAATGAT 
    GGATCATATG GGAATCCAGC TGGGTATGGT GCTGTTGGAG GACGTTCTGG GGGCACTCCA 
    AACAGTAATG TTGGTGGTCC TGGTGGAGCA GAACTACAGG GGAGTGGCGG TGGCTACATG 
    GGGAGTGGAT ATGGTGATGC AAATGGAAAT TCTGGGTATG GAAATGCAGC GTGGAGATCT 
    GAGCAATCAC AAGCTTCTGG AAATTATGGG GCTCCTCAAG CAAATGGTCC TCATGGTGGA 
    CAGGTTGGAT ATGGTGGTGG TTATGGTAGT TCTCAGGCTC GAAAAGCCCA ACAACAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006378320.1
    CDS220..1599
    Translation

    Target ORF information:

    RefSeq Version XM_006378258.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0010s07790g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006378258.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    ATGGATTCAG ATCAGGGAAA GCTATTTATT GGAGGGATTT CGTGGGAGAC ATCAGAGGAG 
    AAGCTCAGAG ACTACTTTGG GCAATACGGG GACGTTTTGC AGGCTGTCGT TATGAAAGAT 
    AAGACTACTG GTAGACCTAG AGGCTTTGGC TTTGTCGTCT TTGCAGATCC TGCCGTGCTT 
    GATATGGTTC TTCAAGATAA GCACACCATT GATGGTAGAA TGGTTGAGGC AAAGAGGGCC 
    TTATCAAGAG AGGAGCAGCA AACCAATGCC AGGGCCGGAA ACCTGAATCC TGCTAGAAAC 
    ACCAGCGGTG GTGGAAATAT TCGGACCAAG AAGATATTTG TTGGAGGATT GCCTCCCACT 
    CTAACTGAAG ATGGATTTCG TCAGTATTTT GAAGCCTTTG GCTTTGTTGC TGATGTAGTA 
    ATAATGTATG ACCAGAGCAC CCAGCGACCT CGTGGATTTG GCTTTATTTC TTTTGACACT 
    GAAGATGCAG TTGACCGGGT GTTACAGAGA TCGTTCCATG ATTTGAACGG TAAGCAAGTT 
    GAAGTGAAAC GGGCTCTTCC TAAAGAGGCC AATCCTGGTG GGGGTGGCCG CTCCATGGGT 
    GGCAGTTACC AGAACTATGG TGCATCTGGT GGCAACACAA GCTCATATGA TGGTCGAATG 
    GAGAGGTATA TGCAGCCTCA AGGTACTGGA GGTGGTTTTC CTCCTTATGG CTCATCTGGC 
    TATAGCACAG CTGGATATGG ATATGGTCCT GCCACTAATG GTGTTGGTTA TGGTGGTTAT 
    AGCGGCTATA CTGGAGCTGG AGCTGGTTAT GGGGGACCTG CAGGTGCAGC TTATGGGAAT 
    CCTAATGTTC CAAATGCTGG CTATGTAAGT GGTGCACCTG GTGCACCCAG AAGTTCATGG 
    AACAGTCAAG GTTCATCTGG CTATGGTGCT ATGGGTTATG GGAATGCTGG TTCTTGGGGC 
    GCTCAAAATG CTGGGGCTGG CAGTGGTGGC CCTGGTTCAG TACCTGCTGG TCAATCTCCT 
    GGTGGAGCCG CTGGGTATGG GAATCAAGGT TATGGGTACA GTAGTTACGG TGGAAATGAT 
    GGATCATATG GGAATCCAGC TGGGTATGGT GCTGTTGGAG GACGTTCTGG GGGCACTCCA 
    AACAGTAATG TTGGTGGTCC TGGTGGAGCA GAACTACAGG GGAGTGGCGG TGGCTACATG 
    GGGAGTGGAT ATGGTGATGC AAATGGAAAT TCTGGGTATG GAAATGCAGC GTGGAGATCT 
    GAGCAATCAC AAGCTTCTGG AAATTATGGG GCTCCTCAAG CAAATGGTCC TCATGGTGGA 
    CAGGTTGGAT ATGGTGGTGG TTATGGTAGT TCTCAGGCTC GAAAAGCCCA ACAACAGTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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