ORF » Species Summary » Populus trichocarpa » LOC18100041 cDNA ORF clone

LOC18100041 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18100041 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18100041 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa16167 XM_006381223.1
Latest version!		 Populus trichocarpa 2 family protein (POPTR_0006s11400g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OPa431515 XM_006381223.2
Latest version!		 Populus trichocarpa 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (LOC18100041), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18100041 ( XM_006381223.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006381285.1 Populus trichocarpa 2 family protein (POPTR_0006s11400g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa16167
    Clone ID Related Accession (Same CDS sequence) XM_006381223.1
    Accession Version XM_006381223.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1683bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product 2 family protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008472). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGGAGCG CAGGACAGAA CGCATGGAAA TTGGCGGATC ATCCTAAGCT TCCAAAGGGA 
    AAGACTATCG CTATGGTGGT TTTGGATGGT TGGGGTGAGG CTAAACCCGA TCAGTATAAC 
    TGTATCCATG TCGCCGATAC TCCTACCATG GATTCCTTCA AAACTACTGC CCCTGAAAGA 
    TGGAGATTGA TTAAGGCTCA TGGTACTGCT GTTGGGCTTC CAAGTGAGGA TGACATGGGC 
    AACAGTGAAG TTGGTCACAA CGCTCTTGGT GCTGGTCGCA TCTTTGCTCA GGGAGCGAAG 
    CTTGTTGATC TTGCTCTTGC CTCTGGAAAA ATCTATGACG GAGAGGGATT TAATTACATT 
    AAACAATCTT TCGACAATGG CACGTTGCAT CTCATTGGAC TATTGAGCGA TGGTGGAGTT 
    CACTCAAGGC TTGATCAGTT GCAGTTGTTG CTGAAAGGTG CTGCTGAACG CGGTGCTAAA 
    AGAATCCGTG TTCACTTTCT TACTGATGGC CGTGATGTTT TAGACGGGTC AAGTGTTGGC 
    TTTGTGGAGA CTCTTGAGAA AGACCTGTCA AATTTACGTG AGAAAGCTGT TGATGCACAA 
    ATTGCATCTG GTGGTGGGCG CATGTATGTC ACAATGGACC GCTATGAGAA TGATTGGAAT 
    GTGGTGAAAC GAGGATGGGA TGCCCAAGTA CTTGGTGAAG CCCCATACAA GTTTAGAAGT 
    GCTGTTGAAG CCGTCAAGAA ACTGAGAGCA GAACCCAAGG CGAATGACCA GTACTTACCT 
    CCTTTTGTCA TTGTTGATGA GAGTGGAAAT CCCGTGGGAC CAATTAAGGA TGGTGATGCT 
    GTTGTCACTT TCAACTTCCG AGCAGATCGC ATGACTATGC TTGCTAAGGC TCTTGAATAT 
    GCGGATTTTG ACAAATTTGA TCGGGTTCGA GTCCCTAAAA TTCATTATGC TGGAATGCTT 
    CAATATGATG GTGAGTTGAA GCTTCCAAGC CAATACCTCG TTACTCCTCC TGAGATAGAA 
    AGGACATCTG GTGAATACTT GGTGCATAAT GGTGTTCGCA CCTTTGCTTG CAGTGAGACT 
    GTTAAATTTG GCCATGTCAC TTTCTTTTGG AATGGAAATC GTTCTGGTTA TTTCAATGAA 
    GAAATGGAGG AATACGTGGA GATTCCAAGT GATGTTGGAA TTACATTCAA TGTCCAACCT 
    AAGATGAAGG CATTAGAGAT TGCTGAAAAG GCAAGGGACG CCATCCTTAG TGGCAAATTT 
    GACCAGGTTC GTGTCAATCT ACCAAATGGT GACATGGTGG GACATACAGG AGACATTGAG 
    GCCACTGTAG TGGCATGCAA GGCTGCTGAT GGTGCTGTTC AGACGATCAT CGATGCTATA 
    GAGCAAGTTG GTGGAATCTA TGTAATTACT GCTGATCATG GCAATGCTGA AGACATGGTT 
    AAGAGGGACA AGTCTGGTAA ACCCCTTTTG GATAAAAGTG GCAAACTCCA GATACTCACT 
    TCTCACACTC TTGAACCAGT GCCTATTGCA ATTGGAGGCC CTGGATTGAA AGCTGGTGTC 
    AGGTTCCGCA ATGATGTTCC CACTGGTGGA CTTGCCAATG TAGCAGCAAC TGTGATCAAT 
    CTTCATGGAT TTGAGGCTCC TAACGACTAT GAGCCCACCC TCATTGAAGT TGTCGATAAC 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006381285.1
    CDS156..1838
    Translation

    Target ORF information:

    RefSeq Version XM_006381223.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa 2 family protein (POPTR_0006s11400g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006381223.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGGAGCG CAGGACAGAA CGCATGGAAA TTGGCGGATC ATCCTAAGCT TCCAAAGGGA 
    AAGACTATCG CTATGGTGGT TTTGGATGGT TGGGGTGAGG CTAAACCCGA TCAGTATAAC 
    TGTATCCATG TCGCCGATAC TCCTACCATG GATTCCTTCA AAACTACTGC CCCTGAAAGA 
    TGGAGATTGA TTAAGGCTCA TGGTACTGCT GTTGGGCTTC CAAGTGAGGA TGACATGGGC 
    AACAGTGAAG TTGGTCACAA CGCTCTTGGT GCTGGTCGCA TCTTTGCTCA GGGAGCGAAG 
    CTTGTTGATC TTGCTCTTGC CTCTGGAAAA ATCTATGACG GAGAGGGATT TAATTACATT 
    AAACAATCTT TCGACAATGG CACGTTGCAT CTCATTGGAC TATTGAGCGA TGGTGGAGTT 
    CACTCAAGGC TTGATCAGTT GCAGTTGTTG CTGAAAGGTG CTGCTGAACG CGGTGCTAAA 
    AGAATCCGTG TTCACTTTCT TACTGATGGC CGTGATGTTT TAGACGGGTC AAGTGTTGGC 
    TTTGTGGAGA CTCTTGAGAA AGACCTGTCA AATTTACGTG AGAAAGCTGT TGATGCACAA 
    ATTGCATCTG GTGGTGGGCG CATGTATGTC ACAATGGACC GCTATGAGAA TGATTGGAAT 
    GTGGTGAAAC GAGGATGGGA TGCCCAAGTA CTTGGTGAAG CCCCATACAA GTTTAGAAGT 
    GCTGTTGAAG CCGTCAAGAA ACTGAGAGCA GAACCCAAGG CGAATGACCA GTACTTACCT 
    CCTTTTGTCA TTGTTGATGA GAGTGGAAAT CCCGTGGGAC CAATTAAGGA TGGTGATGCT 
    GTTGTCACTT TCAACTTCCG AGCAGATCGC ATGACTATGC TTGCTAAGGC TCTTGAATAT 
    GCGGATTTTG ACAAATTTGA TCGGGTTCGA GTCCCTAAAA TTCATTATGC TGGAATGCTT 
    CAATATGATG GTGAGTTGAA GCTTCCAAGC CAATACCTCG TTACTCCTCC TGAGATAGAA 
    AGGACATCTG GTGAATACTT GGTGCATAAT GGTGTTCGCA CCTTTGCTTG CAGTGAGACT 
    GTTAAATTTG GCCATGTCAC TTTCTTTTGG AATGGAAATC GTTCTGGTTA TTTCAATGAA 
    GAAATGGAGG AATACGTGGA GATTCCAAGT GATGTTGGAA TTACATTCAA TGTCCAACCT 
    AAGATGAAGG CATTAGAGAT TGCTGAAAAG GCAAGGGACG CCATCCTTAG TGGCAAATTT 
    GACCAGGTTC GTGTCAATCT ACCAAATGGT GACATGGTGG GACATACAGG AGACATTGAG 
    GCCACTGTAG TGGCATGCAA GGCTGCTGAT GGTGCTGTTC AGACGATCAT CGATGCTATA 
    GAGCAAGTTG GTGGAATCTA TGTAATTACT GCTGATCATG GCAATGCTGA AGACATGGTT 
    AAGAGGGACA AGTCTGGTAA ACCCCTTTTG GATAAAAGTG GCAAACTCCA GATACTCACT 
    TCTCACACTC TTGAACCAGT GCCTATTGCA ATTGGAGGCC CTGGATTGAA AGCTGGTGTC 
    AGGTTCCGCA ATGATGTTCC CACTGGTGGA CTTGCCAATG TAGCAGCAAC TGTGATCAAT 
    CTTCATGGAT TTGAGGCTCC TAACGACTAT GAGCCCACCC TCATTGAAGT TGTCGATAAC 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18100041 ( XM_006381223.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006381285.2 Populus trichocarpa 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (LOC18100041), mRNA.
    Price & Availability↑
    CloneID OPa431515
    Clone ID Related Accession (Same CDS sequence) XM_006381223.2
    Accession Version XM_006381223.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1683bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037290.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006381223.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGGAGCG CAGGACAGAA CGCATGGAAA TTGGCGGATC ATCCTAAGCT TCCAAAGGGA 
    AAGACTATCG CTATGGTGGT TTTGGATGGT TGGGGTGAGG CTAAACCCGA TCAGTATAAC 
    TGTATCCATG TCGCCGATAC TCCTACCATG GATTCCTTCA AAACTACTGC CCCTGAAAGA 
    TGGAGATTGA TTAAGGCTCA TGGTACTGCT GTTGGGCTTC CAAGTGAGGA TGACATGGGC 
    AACAGTGAAG TTGGTCACAA CGCTCTTGGT GCTGGTCGCA TCTTTGCTCA GGGAGCGAAG 
    CTTGTTGATC TTGCTCTTGC CTCTGGAAAA ATCTATGACG GAGAGGGATT TAATTACATT 
    AAACAATCTT TCGACAATGG CACGTTGCAT CTCATTGGAC TATTGAGCGA TGGTGGAGTT 
    CACTCAAGGC TTGATCAGTT GCAGTTGTTG CTGAAAGGTG CTGCTGAACG CGGTGCTAAA 
    AGAATCCGTG TTCACTTTCT TACTGATGGC CGTGATGTTT TAGACGGGTC AAGTGTTGGC 
    TTTGTGGAGA CTCTTGAGAA AGACCTGTCA AATTTACGTG AGAAAGCTGT TGATGCACAA 
    ATTGCATCTG GTGGTGGGCG CATGTATGTC ACAATGGACC GCTATGAGAA TGATTGGAAT 
    GTGGTGAAAC GAGGATGGGA TGCCCAAGTA CTTGGTGAAG CCCCATACAA GTTTAGAAGT 
    GCTGTTGAAG CCGTCGAGAA ACTGAGAGCA GAACCCAAGG CGAATGACCA GTACTTACCT 
    CCTTTTGTCA TTGTTGATGA GAGTGGAAAT CCCGTGGGAC CAATTAAGGA TGGTGATGCT 
    GTTGTCACTT TCAACTTCCG AGCAGATCGC ATGACTATGC TTGCTAAGGC TCTTGAATAT 
    GCGGATTTTG ACAAATTTGA TCGGGTTCGA GTCCCTAAAA TTCATTATGC TGGAATGCTT 
    CAATATGATG GTGAGTTGAA GCTTCCAAGC CAATACCTCG TTACTCCTCC TGAGATAGAA 
    AGGACATCTG GTGAATACTT GGTGCATAAT GGTGTTCGCA CCTTTGCTTG CAGTGAGACT 
    GTTAAATTTG GCCATGTCAC TTTCTTTTGG AATGGAAATC GTTCTGGTTA TTTCAATGAA 
    GAAATGGAGG AATACGTGGA GATTCCAAGT GATGTTGGAA TTACATTCAA TGTCCAACCT 
    AAGATGAAGG CATTAGAGAT TGCTGAAAAG GCAAGGGACG CCATCCTTAG TGGCAAATTT 
    GACCAGGTTC GTGTCAATCT ACCAAATGGT GACATGGTGG GACATACAGG AGACATTGAG 
    GCCACTGTAG TGGCATGCAA GGCTGCTGAT GGTGCTGTTC AGACGATCAT CGATGCTATA 
    GAGCAAGTTG GTGGAATCTA TGTAATTACT GCTGATCATG GCAATGCTGA AGACATGGTT 
    AAGAGGGACA AGTCTGGTAA ACCCCTTTTG GATAAAAGTG GCAAACTCCA GATACTCACT 
    TCTCACACTC TTGAACCAGT GCCTATTGCA ATTGGAGGCC CTGGATTGAA AGCTGGTGTC 
    AGGTTCCGCA ATGATGTTCC CACTGGTGGA CTTGCCAATG TAGCAGCAAC TGTGATCAAT 
    CTTCATGGAT TTGAGGCTCC TAACGACTAT GAGCCCACCC TCATTGAAGT TGTCGATAAC 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006381285.2
    CDS180..1862
    Translation

    Target ORF information:

    RefSeq Version XM_006381223.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (LOC18100041), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006381223.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGGGAGCG CAGGACAGAA CGCATGGAAA TTGGCGGATC ATCCTAAGCT TCCAAAGGGA 
    AAGACTATCG CTATGGTGGT TTTGGATGGT TGGGGTGAGG CTAAACCCGA TCAGTATAAC 
    TGTATCCATG TCGCCGATAC TCCTACCATG GATTCCTTCA AAACTACTGC CCCTGAAAGA 
    TGGAGATTGA TTAAGGCTCA TGGTACTGCT GTTGGGCTTC CAAGTGAGGA TGACATGGGC 
    AACAGTGAAG TTGGTCACAA CGCTCTTGGT GCTGGTCGCA TCTTTGCTCA GGGAGCGAAG 
    CTTGTTGATC TTGCTCTTGC CTCTGGAAAA ATCTATGACG GAGAGGGATT TAATTACATT 
    AAACAATCTT TCGACAATGG CACGTTGCAT CTCATTGGAC TATTGAGCGA TGGTGGAGTT 
    CACTCAAGGC TTGATCAGTT GCAGTTGTTG CTGAAAGGTG CTGCTGAACG CGGTGCTAAA 
    AGAATCCGTG TTCACTTTCT TACTGATGGC CGTGATGTTT TAGACGGGTC AAGTGTTGGC 
    TTTGTGGAGA CTCTTGAGAA AGACCTGTCA AATTTACGTG AGAAAGCTGT TGATGCACAA 
    ATTGCATCTG GTGGTGGGCG CATGTATGTC ACAATGGACC GCTATGAGAA TGATTGGAAT 
    GTGGTGAAAC GAGGATGGGA TGCCCAAGTA CTTGGTGAAG CCCCATACAA GTTTAGAAGT 
    GCTGTTGAAG CCGTCGAGAA ACTGAGAGCA GAACCCAAGG CGAATGACCA GTACTTACCT 
    CCTTTTGTCA TTGTTGATGA GAGTGGAAAT CCCGTGGGAC CAATTAAGGA TGGTGATGCT 
    GTTGTCACTT TCAACTTCCG AGCAGATCGC ATGACTATGC TTGCTAAGGC TCTTGAATAT 
    GCGGATTTTG ACAAATTTGA TCGGGTTCGA GTCCCTAAAA TTCATTATGC TGGAATGCTT 
    CAATATGATG GTGAGTTGAA GCTTCCAAGC CAATACCTCG TTACTCCTCC TGAGATAGAA 
    AGGACATCTG GTGAATACTT GGTGCATAAT GGTGTTCGCA CCTTTGCTTG CAGTGAGACT 
    GTTAAATTTG GCCATGTCAC TTTCTTTTGG AATGGAAATC GTTCTGGTTA TTTCAATGAA 
    GAAATGGAGG AATACGTGGA GATTCCAAGT GATGTTGGAA TTACATTCAA TGTCCAACCT 
    AAGATGAAGG CATTAGAGAT TGCTGAAAAG GCAAGGGACG CCATCCTTAG TGGCAAATTT 
    GACCAGGTTC GTGTCAATCT ACCAAATGGT GACATGGTGG GACATACAGG AGACATTGAG 
    GCCACTGTAG TGGCATGCAA GGCTGCTGAT GGTGCTGTTC AGACGATCAT CGATGCTATA 
    GAGCAAGTTG GTGGAATCTA TGTAATTACT GCTGATCATG GCAATGCTGA AGACATGGTT 
    AAGAGGGACA AGTCTGGTAA ACCCCTTTTG GATAAAAGTG GCAAACTCCA GATACTCACT 
    TCTCACACTC TTGAACCAGT GCCTATTGCA ATTGGAGGCC CTGGATTGAA AGCTGGTGTC 
    AGGTTCCGCA ATGATGTTCC CACTGGTGGA CTTGCCAATG TAGCAGCAAC TGTGATCAAT 
    CTTCATGGAT TTGAGGCTCC TAACGACTAT GAGCCCACCC TCATTGAAGT TGTCGATAAC 
    TAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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