ORF » Species Summary » Populus trichocarpa » LOC18097647 cDNA ORF clone

LOC18097647 cDNA ORF clone, Populus trichocarpa(black cottonwood)

The following LOC18097647 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC18097647 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa10764 XM_006384180.2
Latest version!		 Populus trichocarpa probable galacturonosyltransferase 9 (LOC18097647), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
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OPa10764 XM_006384180.1 Populus trichocarpa hypothetical protein (POPTR_0004s10980g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
Hide Old Accession Versions >>

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC18097647 ( XM_006384180.1 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006384242.1 Populus trichocarpa hypothetical protein (POPTR_0004s10980g) mRNA, complete cds.
    Price & Availability↑
    CloneID OPa10764
    Clone ID Related Accession (Same CDS sequence) XM_006384180.1 , XM_006384180.2
    Accession Version XM_006384180.1 Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1689bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470). COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCGCTGG CGGCCCGAGG AACCCGAGGG GGAGGCAGCG GCGGCATCAA CGGTGGACTC 
    CGCCCTTTTT TCTCTTACCG GATCTTCATC TCTGCCATTT TCACTCTTCT CTTCCTCGCT 
    ACTTTCTCCA TTCTATTCTC CTCTCACCAT CACCATCACC ATCACGAAGA CGACTCACTG 
    CCTAGTAGCG GAAATGCTTA CGTACAACGT ACCTTTTTGG CGGTTAAATC AGATCCCTTA 
    AAAACACGAT TAGATTTGAT ATATAAACAA GCGAATGATC ACATGACTTT AGTCAATGCA 
    TACGCCGCGT ATGCGAGAAA GCTCAAGCTT GATATTTCTA AACAGTTAAG AATGTTTGAT 
    GAATTAGCTA AGAATTTAAC GGATTTACCT TTGAAACCGA GTTATAAATC CTCCCTTTTC 
    GAGCCGGGTA GTCCGGTGGA TGAGGATGTT TTAAGGCAAT TTGAGAAGGA AGTTAAGGAT 
    ATAGTGAAAG TTGCCAGGTT AATGATAGTG GAATCGAAGG AGAGTTATGA TAATCAGATA 
    AAAATTCAGA AGTTGAAAGA TACGATTTTT GCGGTTAATG AGTTGTTAAT TAAGGCCAAG 
    AAGAATGGAG CGTTTGCGAG CTTGATTTCT GCCAAGTCTG TACCGAAGAG TTTGCATTGT 
    TTGGCGATGA GGCTTGTGGA GGAGAGGGTT GCCCATCCGG AGAAGTACAA GGAGGAAGGG 
    TATAAGGAGG AGTTTGAGGA TCCAAGTTTG TATCATTATG CTATTTTTTC AGATAATGTG 
    ATTGCGGTTT CAGTTTTGAT TAGGTCTGTG GTGAAGAATG CGGAGGAACC GTGGAAACAT 
    GTTTTTCACG TGGTTACAGA TAGGATGAAT GTTGCAGCTA TGAAGGTTTG GTTTAGGATG 
    CGGCCTGTGG AAGGTGGCGC TTTTGTAGGG ATCAAGGCAG TGGAGGAGTA TAGATTCTTG 
    AATTCATCAT ATGTGCCGGT TTTGAGGCAG CTTGAGAATG CTAATATGCA GAAGTTTTAT 
    TTTGAGAATC AGGCAGAGAA TGCTACCAAA GATTCGACTA ATATGAAGTT TCGGAACCCT 
    AAGTACTTGT CTATGTTGAA TCATCTTCGG TTTTATTTGC CAGAGATGTA TCCTAAGTTG 
    CATAAAATTT TGTTTTTGGA TGATGATGTT GTGGTTCAGA AGGATTTGAC TGGGTTGTGG 
    AAGGTTGATT TGGATGGTAA GGTGAATGGA GCTGTTGAGA CTTGCTTTGG ATCATTTCAT 
    CGTTATGCAC AGTATTTGAA CTTTTCACAT CCTTTGATTA AGGAGAGGTT TAATCCCAAG 
    GCCTGTGCCT GGGCTTTTGG GATGAATATA TTTGATCTTG ATGCATGGAG GCGGGAGAAA 
    TGCACAGAGC AGTATCATTA TTGGCAGAGC CTGAATGAGG AACGCACTCT ATGGAAACTG 
    GGTACTCTTC CACCTGGCTT GATCACCTTT TACTCAACGA CGAAGTCCCT GGACAAATCC 
    TGGCATGTGC TTGGCCTCGG ATATAATCCA AGTATTAGTA TGGACGAGAT CAGCAACGCT 
    GCTGTCATTC ATTATAATGG AAACATGAAA CCTTGGCTTG ACATTGCAAT GAACCAGTAC 
    AAGAATCTCT GGACTAAGTA TGTAGACAAT GATATGGAAT TTGTTCAGAC ATGCAATTTT 
    GGCCTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384242.1
    CDS1..1689
    Translation

    Target ORF information:

    RefSeq Version XM_006384180.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s10980g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384180.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCGCTGG CGGCCCGAGG AACCCGAGGG GGAGGCAGCG GCGGCATCAA CGGTGGACTC 
    CGCCCTTTTT TCTCTTACCG GATCTTCATC TCTGCCATTT TCACTCTTCT CTTCCTCGCT 
    ACTTTCTCCA TTCTATTCTC CTCTCACCAT CACCATCACC ATCACGAAGA CGACTCACTG 
    CCTAGTAGCG GAAATGCTTA CGTACAACGT ACCTTTTTGG CGGTTAAATC AGATCCCTTA 
    AAAACACGAT TAGATTTGAT ATATAAACAA GCGAATGATC ACATGACTTT AGTCAATGCA 
    TACGCCGCGT ATGCGAGAAA GCTCAAGCTT GATATTTCTA AACAGTTAAG AATGTTTGAT 
    GAATTAGCTA AGAATTTAAC GGATTTACCT TTGAAACCGA GTTATAAATC CTCCCTTTTC 
    GAGCCGGGTA GTCCGGTGGA TGAGGATGTT TTAAGGCAAT TTGAGAAGGA AGTTAAGGAT 
    ATAGTGAAAG TTGCCAGGTT AATGATAGTG GAATCGAAGG AGAGTTATGA TAATCAGATA 
    AAAATTCAGA AGTTGAAAGA TACGATTTTT GCGGTTAATG AGTTGTTAAT TAAGGCCAAG 
    AAGAATGGAG CGTTTGCGAG CTTGATTTCT GCCAAGTCTG TACCGAAGAG TTTGCATTGT 
    TTGGCGATGA GGCTTGTGGA GGAGAGGGTT GCCCATCCGG AGAAGTACAA GGAGGAAGGG 
    TATAAGGAGG AGTTTGAGGA TCCAAGTTTG TATCATTATG CTATTTTTTC AGATAATGTG 
    ATTGCGGTTT CAGTTTTGAT TAGGTCTGTG GTGAAGAATG CGGAGGAACC GTGGAAACAT 
    GTTTTTCACG TGGTTACAGA TAGGATGAAT GTTGCAGCTA TGAAGGTTTG GTTTAGGATG 
    CGGCCTGTGG AAGGTGGCGC TTTTGTAGGG ATCAAGGCAG TGGAGGAGTA TAGATTCTTG 
    AATTCATCAT ATGTGCCGGT TTTGAGGCAG CTTGAGAATG CTAATATGCA GAAGTTTTAT 
    TTTGAGAATC AGGCAGAGAA TGCTACCAAA GATTCGACTA ATATGAAGTT TCGGAACCCT 
    AAGTACTTGT CTATGTTGAA TCATCTTCGG TTTTATTTGC CAGAGATGTA TCCTAAGTTG 
    CATAAAATTT TGTTTTTGGA TGATGATGTT GTGGTTCAGA AGGATTTGAC TGGGTTGTGG 
    AAGGTTGATT TGGATGGTAA GGTGAATGGA GCTGTTGAGA CTTGCTTTGG ATCATTTCAT 
    CGTTATGCAC AGTATTTGAA CTTTTCACAT CCTTTGATTA AGGAGAGGTT TAATCCCAAG 
    GCCTGTGCCT GGGCTTTTGG GATGAATATA TTTGATCTTG ATGCATGGAG GCGGGAGAAA 
    TGCACAGAGC AGTATCATTA TTGGCAGAGC CTGAATGAGG AACGCACTCT ATGGAAACTG 
    GGTACTCTTC CACCTGGCTT GATCACCTTT TACTCAACGA CGAAGTCCCT GGACAAATCC 
    TGGCATGTGC TTGGCCTCGG ATATAATCCA AGTATTAGTA TGGACGAGAT CAGCAACGCT 
    GCTGTCATTC ATTATAATGG AAACATGAAA CCTTGGCTTG ACATTGCAAT GAACCAGTAC 
    AAGAATCTCT GGACTAAGTA TGTAGACAAT GATATGGAAT TTGTTCAGAC ATGCAATTTT 
    GGCCTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC18097647 ( XM_006384180.2 ) cDNA ORF clone, Populus trichocarpa(black cottonwood) -> XP_006384242.1 Populus trichocarpa probable galacturonosyltransferase 9 (LOC18097647), mRNA.
    Price & Availability↑
    CloneID OPa10764
    Clone ID Related Accession (Same CDS sequence) XM_006384180.1 , XM_006384180.2
    Accession Version XM_006384180.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1689bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product probable galacturonosyltransferase 9
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006384180.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCGCTGG CGGCCCGAGG AACCCGAGGG GGAGGCAGCG GCGGCATCAA CGGTGGACTC 
    CGCCCTTTTT TCTCTTACCG GATCTTCATC TCTGCCATTT TCACTCTTCT CTTCCTCGCT 
    ACTTTCTCCA TTCTATTCTC CTCTCACCAT CACCATCACC ATCACGAAGA CGACTCACTG 
    CCTAGTAGCG GAAATGCTTA CGTACAACGT ACCTTTTTGG CGGTTAAATC AGATCCCTTA 
    AAAACACGAT TAGATTTGAT ATATAAACAA GCGAATGATC ACATGACTTT AGTCAATGCA 
    TACGCCGCGT ATGCGAGAAA GCTCAAGCTT GATATTTCTA AACAGTTAAG AATGTTTGAT 
    GAATTAGCTA AGAATTTAAC GGATTTACCT TTGAAACCGA GTTATAAATC CTCCCTTTTC 
    GAGCCGGGTA GTCCGGTGGA TGAGGATGTT TTAAGGCAAT TTGAGAAGGA AGTTAAGGAT 
    ATAGTGAAAG TTGCCAGGTT AATGATAGTG GAATCGAAGG AGAGTTATGA TAATCAGATA 
    AAAATTCAGA AGTTGAAAGA TACGATTTTT GCGGTTAATG AGTTGTTAAT TAAGGCCAAG 
    AAGAATGGAG CGTTTGCGAG CTTGATTTCT GCCAAGTCTG TACCGAAGAG TTTGCATTGT 
    TTGGCGATGA GGCTTGTGGA GGAGAGGGTT GCCCATCCGG AGAAGTACAA GGAGGAAGGG 
    TATAAGGAGG AGTTTGAGGA TCCAAGTTTG TATCATTATG CTATTTTTTC AGATAATGTG 
    ATTGCGGTTT CAGTTTTGAT TAGGTCTGTG GTGAAGAATG CGGAGGAACC GTGGAAACAT 
    GTTTTTCACG TGGTTACAGA TAGGATGAAT GTTGCAGCTA TGAAGGTTTG GTTTAGGATG 
    CGGCCTGTGG AAGGTGGCGC TTTTGTAGGG ATCAAGGCAG TGGAGGAGTA TAGATTCTTG 
    AATTCATCAT ATGTGCCGGT TTTGAGGCAG CTTGAGAATG CTAATATGCA GAAGTTTTAT 
    TTTGAGAATC AGGCAGAGAA TGCTACCAAA GATTCGACTA ATATGAAGTT TCGGAACCCT 
    AAGTACTTGT CTATGTTGAA TCATCTTCGG TTTTATTTGC CAGAGATGTA TCCTAAGTTG 
    CATAAAATTT TGTTTTTGGA TGATGATGTT GTGGTTCAGA AGGATTTGAC TGGGTTGTGG 
    AAGGTTGATT TGGATGGTAA GGTGAATGGA GCTGTTGAGA CTTGCTTTGG ATCATTTCAT 
    CGTTATGCAC AGTATTTGAA CTTTTCACAT CCTTTGATTA AGGAGAGGTT TAATCCCAAG 
    GCCTGTGCCT GGGCTTTTGG GATGAATATA TTTGATCTTG ATGCATGGAG GCGGGAGAAA 
    TGCACAGAGC AGTATCATTA TTGGCAGAGC CTGAATGAGG AACGCACTCT ATGGAAACTG 
    GGTACTCTTC CACCTGGCTT GATCACCTTT TACTCAACGA CGAAGTCCCT GGACAAATCC 
    TGGCATGTGC TTGGCCTCGG ATATAATCCA AGTATTAGTA TGGACGAGAT CAGCAACGCT 
    GCTGTCATTC ATTATAATGG AAACATGAAA CCTTGGCTTG ACATTGCAAT GAACCAGTAC 
    AAGAATCTCT GGACTAAGTA TGTAGACAAT GATATGGAAT TTGTTCAGAC ATGCAATTTT 
    GGCCTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006384242.1
    CDS130..1818
    Translation

    Target ORF information:

    RefSeq Version XM_006384180.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa probable galacturonosyltransferase 9 (LOC18097647), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_006384180.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    ATGGCGCTGG CGGCCCGAGG AACCCGAGGG GGAGGCAGCG GCGGCATCAA CGGTGGACTC 
    CGCCCTTTTT TCTCTTACCG GATCTTCATC TCTGCCATTT TCACTCTTCT CTTCCTCGCT 
    ACTTTCTCCA TTCTATTCTC CTCTCACCAT CACCATCACC ATCACGAAGA CGACTCACTG 
    CCTAGTAGCG GAAATGCTTA CGTACAACGT ACCTTTTTGG CGGTTAAATC AGATCCCTTA 
    AAAACACGAT TAGATTTGAT ATATAAACAA GCGAATGATC ACATGACTTT AGTCAATGCA 
    TACGCCGCGT ATGCGAGAAA GCTCAAGCTT GATATTTCTA AACAGTTAAG AATGTTTGAT 
    GAATTAGCTA AGAATTTAAC GGATTTACCT TTGAAACCGA GTTATAAATC CTCCCTTTTC 
    GAGCCGGGTA GTCCGGTGGA TGAGGATGTT TTAAGGCAAT TTGAGAAGGA AGTTAAGGAT 
    ATAGTGAAAG TTGCCAGGTT AATGATAGTG GAATCGAAGG AGAGTTATGA TAATCAGATA 
    AAAATTCAGA AGTTGAAAGA TACGATTTTT GCGGTTAATG AGTTGTTAAT TAAGGCCAAG 
    AAGAATGGAG CGTTTGCGAG CTTGATTTCT GCCAAGTCTG TACCGAAGAG TTTGCATTGT 
    TTGGCGATGA GGCTTGTGGA GGAGAGGGTT GCCCATCCGG AGAAGTACAA GGAGGAAGGG 
    TATAAGGAGG AGTTTGAGGA TCCAAGTTTG TATCATTATG CTATTTTTTC AGATAATGTG 
    ATTGCGGTTT CAGTTTTGAT TAGGTCTGTG GTGAAGAATG CGGAGGAACC GTGGAAACAT 
    GTTTTTCACG TGGTTACAGA TAGGATGAAT GTTGCAGCTA TGAAGGTTTG GTTTAGGATG 
    CGGCCTGTGG AAGGTGGCGC TTTTGTAGGG ATCAAGGCAG TGGAGGAGTA TAGATTCTTG 
    AATTCATCAT ATGTGCCGGT TTTGAGGCAG CTTGAGAATG CTAATATGCA GAAGTTTTAT 
    TTTGAGAATC AGGCAGAGAA TGCTACCAAA GATTCGACTA ATATGAAGTT TCGGAACCCT 
    AAGTACTTGT CTATGTTGAA TCATCTTCGG TTTTATTTGC CAGAGATGTA TCCTAAGTTG 
    CATAAAATTT TGTTTTTGGA TGATGATGTT GTGGTTCAGA AGGATTTGAC TGGGTTGTGG 
    AAGGTTGATT TGGATGGTAA GGTGAATGGA GCTGTTGAGA CTTGCTTTGG ATCATTTCAT 
    CGTTATGCAC AGTATTTGAA CTTTTCACAT CCTTTGATTA AGGAGAGGTT TAATCCCAAG 
    GCCTGTGCCT GGGCTTTTGG GATGAATATA TTTGATCTTG ATGCATGGAG GCGGGAGAAA 
    TGCACAGAGC AGTATCATTA TTGGCAGAGC CTGAATGAGG AACGCACTCT ATGGAAACTG 
    GGTACTCTTC CACCTGGCTT GATCACCTTT TACTCAACGA CGAAGTCCCT GGACAAATCC 
    TGGCATGTGC TTGGCCTCGG ATATAATCCA AGTATTAGTA TGGACGAGAT CAGCAACGCT 
    GCTGTCATTC ATTATAATGG AAACATGAAA CCTTGGCTTG ACATTGCAAT GAACCAGTAC 
    AAGAATCTCT GGACTAAGTA TGTAGACAAT GATATGGAAT TTGTTCAGAC ATGCAATTTT 
    GGCCTTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D


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