POPTR_0004s01110g cDNA ORF clone, Populus trichocarpa(Populus balsamifera subsp. trichocarpa)

The following POPTR_0004s01110g gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the POPTR_0004s01110g cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OPa10563 XM_006383844.1
Latest version!
Populus trichocarpa hypothetical protein (POPTR_0004s01110g) mRNA, complete cds. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00
OPa427450 XM_006383844.2
Latest version!
Populus trichocarpa glucan endo-1,3-beta-glucosidase 1 (LOC18097371), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OPa10563
    Clone ID Related Accession (Same CDS sequence) XM_006383844.1
    Accession Version XM_006383844.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1419bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1388332800000
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_008470).

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGTCAGCTA CAGAACTTGT TTCATTTCTA CAATTTCAAA AGGTTACACA TATCAAGCTT 
    TATGATGTAG ACCCCGACAT ACTCAAGGCC TTGGCTAAAA CCAAGATCCG GGTCATTATT
    AGTGTTCCAA ATAATCAGCT TCTTGCTATT GGATCCTCCA ATACAACTGC AGCTTCTTGG
    ATTGGTAAAA ATGTTGTTGC TTATTATCCA CAGACTGTAA TTACTGCAAT TGCTGTTGGT
    GATGAGGTTT TAACTACGGT ACCCTCTTCA GCTCCTTTGC TTATGCCAGC TATTGAGTCT
    CTTTATAGTG TTTTGGTGGC TGAAAATTTG CATAATCAGA TAAAGATTTC AACTCCACAC
    TCTGCTTCTA TAATTCTTGA TTCATTTCCA CCTTCTCAGT CTTTTTTTAA TCAGAGTTGG
    ATCTCGGTTA TTCAACCTTT GCTTCATTTT TTATCAAGAA CTGGGTCACC TTTGATGATG
    AATTTTTATC CTTACTATGT GTTTATGCAA AATAAAGGAG TGGTGCCTCT TGATAATTCT
    TTGTTCAAGC CCTTGACACC ATCCAAGGAA ATGGTTGATC CTAATACTTT GTTGCATTAC
    ACCAATGTTC TTGATGCTAT GGTTGATGCT GCTTATTTTT CGATGAAGAA TATGAATTTT
    ACTGATGTTG TGGTTCTTGT TACCGAGAGT GGTTGGCCTT CAAAGGGTGA TTCAAAAGAA
    CCTTATGCTA CAATTGACAA TGCAGATACT TATAATTCTA ATTTGATTAA GCATGTTCTT
    GATCGTAGCG GGACTCCTTT GCACCCAGAA ATCACTTCTA GTGTGTATTT ATACGAGTTG
    TTCAATGAAG ACTTGAGGTC ACCACCAGTA TCAGAAGCAA ATTGGGGATT GTTTTATGCG
    AATTCGACAC CGGTTTATTT GCTTCATGTA TCTGGAAGTG GGACTTTCTT GGCTAATGAT
    ACAACCAACC AAACATATTG TATTGTTATG GATGGTGTTG ATTCAAAGAC ATTGCAAGCA
    GCATTGGATT GGGTATGTGG ACCAGGAAGG GCTAATTGTA GTGAGATTCA GCCAGGGGAG
    AATTGTTATC AGCCTAACAA TGTTAAGAAC CATGCCTCTT ATGCATTTGA TAGCTATTAC
    CAGAAGGAAG GAAGGGCTTC TGGGTCCTGT GATTTCAAGG GCATTGCCAT GACCACCACT
    ACCGATCCAA GTCATGGGAG CTGTATATTT CCTGGAAGCA AAAAAATAAC GAATAAGGCG
    AGGACGGTGG TGAACACAAC CAATCCAAGT AACGCAGCGG GTGGTTCAAG ATTAATCAGC
    TTCAAAAGCA GTAGAATGAG TGCAGTAGAC AAGGCATTAC AAACTCTCTT GACTGTAATC
    TTCTCTATTT TGTTATACAT TCCCTTTATG ATGTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006383906.1
    CDS98..1516
    Translation

    Target ORF information:

    RefSeq Version XM_006383844.1
    Organism Populus trichocarpa(Populus balsamifera subsp. trichocarpa)
    Definition Populus trichocarpa hypothetical protein (POPTR_0004s01110g) mRNA, complete cds.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006383844.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGTCAGCTA CAGAACTTGT TTCATTTCTA CAATTTCAAA AGGTTACACA TATCAAGCTT 
    TATGATGTAG ACCCCGACAT ACTCAAGGCC TTGGCTAAAA CCAAGATCCG GGTCATTATT
    AGTGTTCCAA ATAATCAGCT TCTTGCTATT GGATCCTCCA ATACAACTGC AGCTTCTTGG
    ATTGGTAAAA ATGTTGTTGC TTATTATCCA CAGACTGTAA TTACTGCAAT TGCTGTTGGT
    GATGAGGTTT TAACTACGGT ACCCTCTTCA GCTCCTTTGC TTATGCCAGC TATTGAGTCT
    CTTTATAGTG TTTTGGTGGC TGAAAATTTG CATAATCAGA TAAAGATTTC AACTCCACAC
    TCTGCTTCTA TAATTCTTGA TTCATTTCCA CCTTCTCAGT CTTTTTTTAA TCAGAGTTGG
    ATCTCGGTTA TTCAACCTTT GCTTCATTTT TTATCAAGAA CTGGGTCACC TTTGATGATG
    AATTTTTATC CTTACTATGT GTTTATGCAA AATAAAGGAG TGGTGCCTCT TGATAATTCT
    TTGTTCAAGC CCTTGACACC ATCCAAGGAA ATGGTTGATC CTAATACTTT GTTGCATTAC
    ACCAATGTTC TTGATGCTAT GGTTGATGCT GCTTATTTTT CGATGAAGAA TATGAATTTT
    ACTGATGTTG TGGTTCTTGT TACCGAGAGT GGTTGGCCTT CAAAGGGTGA TTCAAAAGAA
    CCTTATGCTA CAATTGACAA TGCAGATACT TATAATTCTA ATTTGATTAA GCATGTTCTT
    GATCGTAGCG GGACTCCTTT GCACCCAGAA ATCACTTCTA GTGTGTATTT ATACGAGTTG
    TTCAATGAAG ACTTGAGGTC ACCACCAGTA TCAGAAGCAA ATTGGGGATT GTTTTATGCG
    AATTCGACAC CGGTTTATTT GCTTCATGTA TCTGGAAGTG GGACTTTCTT GGCTAATGAT
    ACAACCAACC AAACATATTG TATTGTTATG GATGGTGTTG ATTCAAAGAC ATTGCAAGCA
    GCATTGGATT GGGTATGTGG ACCAGGAAGG GCTAATTGTA GTGAGATTCA GCCAGGGGAG
    AATTGTTATC AGCCTAACAA TGTTAAGAAC CATGCCTCTT ATGCATTTGA TAGCTATTAC
    CAGAAGGAAG GAAGGGCTTC TGGGTCCTGT GATTTCAAGG GCATTGCCAT GACCACCACT
    ACCGATCCAA GTCATGGGAG CTGTATATTT CCTGGAAGCA AAAAAATAAC GAATAAGGCG
    AGGACGGTGG TGAACACAAC CAATCCAAGT AACGCAGCGG GTGGTTCAAG ATTAATCAGC
    TTCAAAAGCA GTAGAATGAG TGCAGTAGAC AAGGCATTAC AAACTCTCTT GACTGTAATC
    TTCTCTATTT TGTTATACAT TCCCTTTATG ATGTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OPa427450
    Clone ID Related Accession (Same CDS sequence) XM_006383844.2
    Accession Version XM_006383844.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1587bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 1523116800000
    Organism Populus trichocarpa(black cottonwood)
    Product glucan endo-1,3-beta-glucosidase 1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037288.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 9, 2018 this sequence version replaced XM_006383844.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Populus trichocarpa Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCACTGT CTAAGCTTCC TCTCTGCAGT GTCTTCTTCT TCCTGTACAT TTCACTTTTT 
    ATATCATCAC AAGCTTTATC ATCAAAAATA GCAGTGGCAC AAATCAAGGA CCAACAAGAC
    AATGAGCCAT TTGTGGGAAT CAACATAGGA GAAGATGTGT CCAATCTTAT GTCAGCTACA
    GAACTTGTTT CATTTCTACA ATTTCAAAAG GTTACACATA TCAAGCTTTA TGATGTAGAC
    CCCGACATAC TCAAGGCCTT GGCTAACACC AAGATCCGGG TCATTATTAG TGTTCCAAAT
    AATCAGCTTC TTGCTATTGG ATCCTCCAAT ACAACTGCAG CTTCTTGGAT TGGTAAAAAT
    GTTGTTGCTT ATTATCCACA GACTGTAATT ACTGCAATTG CTGTTGGTGA TGAGGTTTTA
    ACTACAGTAC CCTCTTCAGC TCCTTTGCTT ATGCCAGCTA TTGAGTCTCT TTATAGTGCT
    TTGGTGGCTG AAAATTTGCA TAATCAGATA AAGATTTCAA CTCCACACTC TGCTTCTATA
    ATTCTTGATT CATTTCCACC TTCTCAGTCT TTTTTTAATC AGAGTTGGAT CTCGGTTATT
    CAACCGTTGC TTCATTTTTT ATCAAGAACT GGGTCACCTT TGATGATGAA TTTTTATCCT
    TACTATGTGT TTATGCAAAA TAAAGGAGTG GTGCCTCTTG ATAATTCTTT GTTCAAGCCC
    TTGACACCAT CCAAGGAAAT GGTTGATCCT AATACTTTGT TGCATTACAC TAATGTTCTT
    GATGCTATGG TTGATGCTGC TTATTTTTCG ATGAAGAATA TGAATTTTAC TGATGTTGTG
    GTTCTTGTTA CCGAGAGTGG TTGGCCTTCA AAGGGTGATT CAAAAGAACC TTATGCTACA
    ATTGACAATG CAGATACTTA TAATTCTAAT TTGATTAAGC ATGTTCTTGA TCGTAGCGGG
    ACTCCTTTGC ACCCAGAAAT CACTTCTAGT GTGTATTTAT ACGAGTTGTT CAATGAAGAC
    TTGAGGTCAC CACCAGTATC AGAAGCAAAT TGGGGATTGT TTTATGCGAA TTCGACACCG
    GTTTATTTGC TTCATGTATC TGGAAGTGGG ACTTTCTTGG CTAATGATAC AACCAACCAA
    ACATATTGTA TTGTTATGGA TGGTGTTGAT TCAAAGACAT TGCAAGCAGC ATTGGATTGG
    GTATGTGGAC CAGGAAGGGC TAATTGTAGC GAGATTCAGC CAGGGGAGAA TTGTTATCAG
    CCTAACAATG TTAAGAACCA TGCCTCTTAT GCATTTGATA GCTATTACCA GAAGGAAGGA
    AGGGCTTCCG GGTCCTGTGA TTTCAAGGGC ATTGCCATGA CCACTACTAC CGATCCAAGT
    CATGGGAGCT GTATATTTCC TGGAAGCAAA AAAATAACGA ATAAGGCGAG GACGGTGGTG
    AACACAACCA ATCCAAGTAA CGCAGCGGGT GGTTCAAGAT TAATCAGCTT CAAAAGCAGT
    AGAATGAGTG CAGTAGACAA GGCATTACAA ACTCTCTTGA CTGTAATCTT CTCTATTTTG
    TTATACATTC CCTTTATGAT GTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_006383906.2
    CDS133..1719
    Translation

    Target ORF information:

    RefSeq Version XM_006383844.2
    Organism Populus trichocarpa(black cottonwood)
    Definition Populus trichocarpa glucan endo-1,3-beta-glucosidase 1 (LOC18097371), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_006383844.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGCACTGT CTAAGCTTCC TCTCTGCAGT GTCTTCTTCT TCCTGTACAT TTCACTTTTT 
    ATATCATCAC AAGCTTTATC ATCAAAAATA GCAGTGGCAC AAATCAAGGA CCAACAAGAC
    AATGAGCCAT TTGTGGGAAT CAACATAGGA GAAGATGTGT CCAATCTTAT GTCAGCTACA
    GAACTTGTTT CATTTCTACA ATTTCAAAAG GTTACACATA TCAAGCTTTA TGATGTAGAC
    CCCGACATAC TCAAGGCCTT GGCTAACACC AAGATCCGGG TCATTATTAG TGTTCCAAAT
    AATCAGCTTC TTGCTATTGG ATCCTCCAAT ACAACTGCAG CTTCTTGGAT TGGTAAAAAT
    GTTGTTGCTT ATTATCCACA GACTGTAATT ACTGCAATTG CTGTTGGTGA TGAGGTTTTA
    ACTACAGTAC CCTCTTCAGC TCCTTTGCTT ATGCCAGCTA TTGAGTCTCT TTATAGTGCT
    TTGGTGGCTG AAAATTTGCA TAATCAGATA AAGATTTCAA CTCCACACTC TGCTTCTATA
    ATTCTTGATT CATTTCCACC TTCTCAGTCT TTTTTTAATC AGAGTTGGAT CTCGGTTATT
    CAACCGTTGC TTCATTTTTT ATCAAGAACT GGGTCACCTT TGATGATGAA TTTTTATCCT
    TACTATGTGT TTATGCAAAA TAAAGGAGTG GTGCCTCTTG ATAATTCTTT GTTCAAGCCC
    TTGACACCAT CCAAGGAAAT GGTTGATCCT AATACTTTGT TGCATTACAC TAATGTTCTT
    GATGCTATGG TTGATGCTGC TTATTTTTCG ATGAAGAATA TGAATTTTAC TGATGTTGTG
    GTTCTTGTTA CCGAGAGTGG TTGGCCTTCA AAGGGTGATT CAAAAGAACC TTATGCTACA
    ATTGACAATG CAGATACTTA TAATTCTAAT TTGATTAAGC ATGTTCTTGA TCGTAGCGGG
    ACTCCTTTGC ACCCAGAAAT CACTTCTAGT GTGTATTTAT ACGAGTTGTT CAATGAAGAC
    TTGAGGTCAC CACCAGTATC AGAAGCAAAT TGGGGATTGT TTTATGCGAA TTCGACACCG
    GTTTATTTGC TTCATGTATC TGGAAGTGGG ACTTTCTTGG CTAATGATAC AACCAACCAA
    ACATATTGTA TTGTTATGGA TGGTGTTGAT TCAAAGACAT TGCAAGCAGC ATTGGATTGG
    GTATGTGGAC CAGGAAGGGC TAATTGTAGC GAGATTCAGC CAGGGGAGAA TTGTTATCAG
    CCTAACAATG TTAAGAACCA TGCCTCTTAT GCATTTGATA GCTATTACCA GAAGGAAGGA
    AGGGCTTCCG GGTCCTGTGA TTTCAAGGGC ATTGCCATGA CCACTACTAC CGATCCAAGT
    CATGGGAGCT GTATATTTCC TGGAAGCAAA AAAATAACGA ATAAGGCGAG GACGGTGGTG
    AACACAACCA ATCCAAGTAA CGCAGCGGGT GGTTCAAGAT TAATCAGCTT CAAAAGCAGT
    AGAATGAGTG CAGTAGACAA GGCATTACAA ACTCTCTTGA CTGTAATCTT CTCTATTTTG
    TTATACATTC CCTTTATGAT GTCTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).
    Science (New York, N.Y.)313(5793)1596-604(2006 Sep)
    Tuskan GA,Difazio S,Jansson S,Bohlmann J,Grigoriev I,Hellsten U,Putnam N,Ralph S,Rombauts S,Salamov A,Schein J,Sterck L,Aerts A,Bhalerao RR,Bhalerao RP,Blaudez D,Boerjan W,Brun A,Brunner A,Busov V,Campbell M,Carlson J,Chalot M,Chapman J,Chen GL,Cooper D,Coutinho PM,Couturier J,Covert S,Cronk Q,Cunningham R,Davis J,Degroeve S,Déjardin A,Depamphilis C,Detter J,Dirks B,Dubchak I,Duplessis S,Ehlting J,Ellis B,Gendler K,Goodstein D,Gribskov M,Grimwood J,Groover A,Gunter L,Hamberger B,Heinze B,Helariutta Y,Henrissat B,Holligan D,Holt R,Huang W,Islam-Faridi N,Jones S,Jones-Rhoades M,Jorgensen R,Joshi C,Kangasjärvi J,Karlsson J,Kelleher C,Kirkpatrick R,Kirst M,Kohler A,Kalluri U,Larimer F,Leebens-Mack J,Leplé JC,Locascio P,Lou Y,Lucas S,Martin F,Montanini B,Napoli C,Nelson DR,Nelson C,Nieminen K,Nilsson O,Pereda V,Peter G,Philippe R,Pilate G,Poliakov A,Razumovskaya J,Richardson P,Rinaldi C,Ritland K,Rouzé P,Ryaboy D,Schmutz J,Schrader J,Segerman B,Shin H,Siddiqui A,Sterky F,Terry A,Tsai CJ,Uberbacher E,Unneberg P,Vahala J,Wall K,Wessler S,Yang G,Yin T,Douglas C,Marra M,Sandberg G,Van de Peer Y,Rokhsar D