PB000036.03.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000036.03.0
Entrez Gene ID	3428993
Full Name	queuine tRNA-ribosyltransferase, putative
Synonyms	PB000036.03.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_675249.2	XP_680341.2	queuine tRNA-ribosyltransferase, putative
XM_675249.1	XP_680341.1	queuine tRNA ribosyltransferase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000036.03.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000036.03.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm07738	XM_675249.2 Latest version!	Plasmodium berghei ANKA queuine tRNA-ribosyltransferase, putative (PBANKA_145560), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000036.03.0 ( XM_675249.2 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_680341.2 Plasmodium berghei ANKA queuine tRNA-ribosyltransferase, putative (PBANKA_145560), partial mRNA.

Price & Availability↑

CloneID	OPm07738
Clone ID Related Accession (Same CDS sequence)	XM_675249.2
Accession Version	XM_675249.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1959bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	queuine tRNA-ribosyltransferase, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036172). On Oct 24, 2017 this sequence version replaced XM_675249.1. COMPLETENESS: incomplete on both ends.

ATGAAAAAAA TAAAATGCCA TTTTGTGTTG TTGTGTAAAC TCCTTAACCT TTTTTTATTT 
GTTATAAAAA GTGAGATTAA AATTGTAAGC AATGAAAGCA TATCAAAGAA AATACAAAAT 
TTATCTATAT GTACAAAAAA ATACAACAGA GAGGAATCAT CAAATATATG TAAAAGAAGG 
GGCATATTAG AAATAAACAA AAATAGCAGA GGTGATAAAT GTAATATCAA CGCGTTCATA 
AATAGTATAA TTGATATAAA ACATGGGAAA TTTTTATCAA AATGTGATCA TAAGATAATA 
AAAACGCATA AGAATAAGTA CAGTAGCAGT AATGATAATT ATGTTTGGAA AAATAGGAAA 
AAAAAGTATA CGTTATTTAG AATAAAAACG AGCTACTATG ATGGTGACAG TAATAGAAGT 
ATGACTCATT GTTTTGACTA CCCATGTTTT GATTTTACAG TTTTGAAAGA AAATACCCAA 
GATAGTAATA ATGGCGATGA AAACAAAAGT AGGTTAGGGA TAATAAAAAC TCCACATGGT 
GAAATAGAAA CCCCAAACTT TTTATTTTGT GCTACTAAAG CATGTATGAA ATCGACTCCA 
ATAAATTTTA TAAAAAATTC AAAAACACAA ATAATTTTGT CAAACACATT TCATTTGTTA 
ATTCAGCCCA AACCGCATAT CATTTTTCAA CTTGGCGGTT TGCATAAGTT TATGAATTGG 
GAAGGCCCAG TTTTAACCGA CTCAGGAGGA TACCAACTTT TTAGTATGAC ATATGGATCT 
GTTTCAGATG AAATAAAAAG AAAAGCTAAT ATAAGAAATT TCGATAGTGT AAATAATAAT 
ATGAACAATA TGAAGGATAA TGAGACAAGT AAATATACCC ATTTAGATGA TATATCCAAT 
ATAGGAAAAA TAAAAAACAT ATCAGAAACA GATAAAAAAA AAAATATTAA AATAAAAAAT 
GGAATATCTA CTATTCCAAA AAATGCGAAT AGTAATGTAA TTATAAAAAT TAATGAAAAT 
GGTGCATTAT ATAAATCTTA TTTTGATGGC TCAATTGATA TATTATCCCC AGAAAGTTCT 
ATTCAAGCAC AATATCTATT AGGCACAGAT TTTTCAGTTG TTCTAGATGA ATGCACCCCT 
TATAATGTTG ATAAAGAATA CACAGAAAAA TCTATGCATA GATCCCATAG ATGGTATATT 
AGATGTTTAT TAGAATTTTA TAGAGCTAAT AATATGGAAA ATTATCATAG TTATTTAAAC 
ATTATATATA ATAAAAAATA TAAAACCAAT AAAATTTGGG AAAAACAAGA AAAAAAAAAA 
CAAGCATTAT ATGGAATAAT ACAAGGAGGA ATATATACAG ATTTACGAAA AAAAAGTTGT 
GAGGTAGTTT GTAATTTACC CTTTTTCGGA TTGTGTATAG GAGGATGTTT AGGTAATAAC 
AAAGAAATGA TGTATAGTGT GATTAAACAA ACAATGAATT TTATAAGAGA AAATCGAAGA 
AACAATAATA GCAAAGGAAA GGGTAAAAAC AAGCCTATAC ATTTATTAGG AATTGGGCAA 
ATTAAAGATA TTTTTTATGG AGTAAAACAA GGAATTGACA CATTCGATTG TGTGATACCA 
ACCAGATTAG CAAGGCATGG TTATTTTTTA TGTAAAATAA AAACTATTAA TGAAGTTGAA 
AAAAAACTTG ACAGAAAAAT TAAAAAGGAA TATCTCAAAA TAAAACTAAA TATATTCAAA 
CTTGATAATA ACCCTTTGGA GGAAGACTGT AACTGCTATA CTTGTAAAAA TCATACAAGA 
GCATATTTAC ATCATCTTTT TAAAATTAAT GATAATTTAT TAGGGACATT ATTAACTGTG 
CATAATGTTT ATTATATGAA TCACTTAATG CAAGATATCC GACAAGGTAT TATTCACAAT 
AATTTGAATA AGGTACAGGA GAGATGGATA CAGCTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_680341.2
CDS	1..1959
Translation	MKKIKCHFVLLCKLLNLFLFVIKSEIKIVSNESISKKIQNLSICTKKYNREESSNICKRRGILEINKNSRGDKCNINAFINSIIDIKHGKFLSKCDHKIIKTHKNKYSSSNDNYVWKNRKKKYTLFRIKTSYYDGDSNRSMTHCFDYPCFDFTVLKENTQDSNNGDENKSRLGIIKTPHGEIETPNFLFCATKACMKSTPINFIKNSKTQIILSNTFHLLIQPKPHIIFQLGGLHKFMNWEGPVLTDSGGYQLFSMTYGSVSDEIKRKANIRNFDSVNNNMNNMKDNETSKYTHLDDISNIGKIKNISETDKKKNIKIKNGISTIPKNANSNVIIKINENGALYKSYFDGSIDILSPESSIQAQYLLGTDFSVVLDECTPYNVDKEYTEKSMHRSHRWYIRCLLEFYRANNMENYHSYLNIIYNKKYKTNKIWEKQEKKKQALYGIIQGGIYTDLRKKSCEVVCNLPFFGLCIGGCLGNNKEMMYSVIKQTMNFIRENRRNNNSKGKGKNKPIHLLGIGQIKDIFYGVKQGIDTFDCVIPTRLARHGYFLCKIKTINEVEKKLDRKIKKEYLKIKLNIFKLDNNPLEEDCNCYTCKNHTRAYLHHLFKINDNLLGTLLTVHNVYYMNHLMQDIRQGIIHNNLNKVQERWIQL

Target ORF information:

RefSeq Version	XM_675249.2
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA queuine tRNA-ribosyltransferase, putative (PBANKA_145560), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_675249.2

ORF Insert Sequence:

ATGAAAAAAA TAAAATGCCA TTTTGTGTTG TTGTGTAAAC TCCTTAACCT TTTTTTATTT 
GTTATAAAAA GTGAGATTAA AATTGTAAGC AATGAAAGCA TATCAAAGAA AATACAAAAT 
TTATCTATAT GTACAAAAAA ATACAACAGA GAGGAATCAT CAAATATATG TAAAAGAAGG 
GGCATATTAG AAATAAACAA AAATAGCAGA GGTGATAAAT GTAATATCAA CGCGTTCATA 
AATAGTATAA TTGATATAAA ACATGGGAAA TTTTTATCAA AATGTGATCA TAAGATAATA 
AAAACGCATA AGAATAAGTA CAGTAGCAGT AATGATAATT ATGTTTGGAA AAATAGGAAA 
AAAAAGTATA CGTTATTTAG AATAAAAACG AGCTACTATG ATGGTGACAG TAATAGAAGT 
ATGACTCATT GTTTTGACTA CCCATGTTTT GATTTTACAG TTTTGAAAGA AAATACCCAA 
GATAGTAATA ATGGCGATGA AAACAAAAGT AGGTTAGGGA TAATAAAAAC TCCACATGGT 
GAAATAGAAA CCCCAAACTT TTTATTTTGT GCTACTAAAG CATGTATGAA ATCGACTCCA 
ATAAATTTTA TAAAAAATTC AAAAACACAA ATAATTTTGT CAAACACATT TCATTTGTTA 
ATTCAGCCCA AACCGCATAT CATTTTTCAA CTTGGCGGTT TGCATAAGTT TATGAATTGG 
GAAGGCCCAG TTTTAACCGA CTCAGGAGGA TACCAACTTT TTAGTATGAC ATATGGATCT 
GTTTCAGATG AAATAAAAAG AAAAGCTAAT ATAAGAAATT TCGATAGTGT AAATAATAAT 
ATGAACAATA TGAAGGATAA TGAGACAAGT AAATATACCC ATTTAGATGA TATATCCAAT 
ATAGGAAAAA TAAAAAACAT ATCAGAAACA GATAAAAAAA AAAATATTAA AATAAAAAAT 
GGAATATCTA CTATTCCAAA AAATGCGAAT AGTAATGTAA TTATAAAAAT TAATGAAAAT 
GGTGCATTAT ATAAATCTTA TTTTGATGGC TCAATTGATA TATTATCCCC AGAAAGTTCT 
ATTCAAGCAC AATATCTATT AGGCACAGAT TTTTCAGTTG TTCTAGATGA ATGCACCCCT 
TATAATGTTG ATAAAGAATA CACAGAAAAA TCTATGCATA GATCCCATAG ATGGTATATT 
AGATGTTTAT TAGAATTTTA TAGAGCTAAT AATATGGAAA ATTATCATAG TTATTTAAAC 
ATTATATATA ATAAAAAATA TAAAACCAAT AAAATTTGGG AAAAACAAGA AAAAAAAAAA 
CAAGCATTAT ATGGAATAAT ACAAGGAGGA ATATATACAG ATTTACGAAA AAAAAGTTGT 
GAGGTAGTTT GTAATTTACC CTTTTTCGGA TTGTGTATAG GAGGATGTTT AGGTAATAAC 
AAAGAAATGA TGTATAGTGT GATTAAACAA ACAATGAATT TTATAAGAGA AAATCGAAGA 
AACAATAATA GCAAAGGAAA GGGTAAAAAC AAGCCTATAC ATTTATTAGG AATTGGGCAA 
ATTAAAGATA TTTTTTATGG AGTAAAACAA GGAATTGACA CATTCGATTG TGTGATACCA 
ACCAGATTAG CAAGGCATGG TTATTTTTTA TGTAAAATAA AAACTATTAA TGAAGTTGAA 
AAAAAACTTG ACAGAAAAAT TAAAAAGGAA TATCTCAAAA TAAAACTAAA TATATTCAAA 
CTTGATAATA ACCCTTTGGA GGAAGACTGT AACTGCTATA CTTGTAAAAA TCATACAAGA 
GCATATTTAC ATCATCTTTT TAAAATTAAT GATAATTTAT TAGGGACATT ATTAACTGTG 
CATAATGTTT ATTATATGAA TCACTTAATG CAAGATATCC GACAAGGTAT TATTCACAAT 
AATTTGAATA AGGTACAGGA GAGATGGATA CAGCTATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000036.03.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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