PB000706.02.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB000706.02.0
Entrez Gene ID	3427198
Full Name	tRNA pseudouridine synthase D, putative
Synonyms	PB000706.02.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_022858608.1	XP_022712327.1	tRNA pseudouridine synthase D, putative
XM_673523.1	XP_678615.1	hypothetical protein

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB000706.02.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB000706.02.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm03217	XM_673523.1 Latest version!	Plasmodium berghei strain ANKA hypothetical protein (PB000706.02.0) partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00
OPm04580	XM_022858608.1 Latest version!	Plasmodium berghei ANKA tRNA pseudouridine synthase D, putative (PBANKA_051880), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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5 or more Clone	50% OFF
All Other ORF Clones
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB000706.02.0 ( XM_673523.1 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_678615.1 Plasmodium berghei strain ANKA hypothetical protein (PB000706.02.0) partial mRNA.

Price & Availability↑

CloneID	OPm03217
Clone ID Related Accession (Same CDS sequence)	XM_673523.1
Accession Version	XM_673523.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3021bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1225296000000
Organism	Plasmodium berghei ANKA
Product	hypothetical protein
Comment	PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_674535). COMPLETENESS: not full length.

ATGTATTTAC CTTATATTGA AAATCATGGA ATTGAATATC TGATTAGGAA AAATATGCAT 
AATCTCGAAG GTATAAATGG TAAAGTAAAA ACAATTTTTG AAGATTTTCA TGTTCACGAA 
ATAACAAAAA ATAACGTTAT TCTACATTTG GATGAAATAA TAAATAAGGA TAAAATTAAT 
CAAATTTTAG AAGACAAAGA AAAGCGCGAT GAAACGAATA TTTTTCAAAA TATAAGTAAT 
TCAGATTTAT GTATTCAACA TTTTAAAAAA CATATAAATG AGTTTGATCA AAATGTTTTC 
AAAAAGTTTT TGAATATTTT GCACCAAATA TATTTACTAA AACAAAAAAA ACCACAAAAA 
AATGAGCTTG AACAGTCCAA AGTAGAAAAC AATAAAATCG AATCTCTAAA TAATGAACCT 
TTTCAAAAAT CAAAAAGAAA ATTCACAATT CCATATTGTG TTTTAACAAA ATTTGATGAT 
CCTACTTTAT ATGAATATAA TGATCAAACC AATGGGGACC AATATAGCAA ATCAAATGAT 
ATTCTATCAG TTGATGAAAA AAAAAAAATT GCAAGAAAAA ATATACATAA TGCTATAAAC 
AAATATTATC CTTTTTTATT AACTGAAACA AAAACAGTTA CTAAATTGGA TACAGTTATA 
TCGCATGGAA ATATATTAAG CGATCAGATA ACAAGCCATT TAAATGAATC ATATACATAC 
GAACACTTAA ATCATAAAAT TAACACTGGC CCTCAAGACC AAAATGAGCA TAAAGAAAAT 
GATAAGAAAC CTTTTACAAT CATAGAAGTT TATCCAAATT TTAATTGTCT TAAAATTATT 
ACCCCCCCTG AGATATTCGA TAAATTAAAG TCGAACGCTA AAAAATTACG TTCTAACAAA 
AATTACGATT TTGAAAATGT TATTTTAGAA GGATTAGAAA AATTAAAAGA TTTTAGTAAG 
GATAAAAATA AACAAAATAA CCACGATATA AAAATATCCC TGGAAAAAAA AAGTGAATAC 
CATAATGATA TAAATCATCA GAAGGATACT CATTTAAATT TATTTCAAAA TAAGGAACTG 
GGGGCACGTT ATGATAACAT AATTAATGAT GATGCTAAAT GCGACAATTT TTCAATCCAT 
TCGCTCAAAA AAAAGCAAAT AGAAATGGAA GAAGAAAGCA CGAATAATTT CTTAAAAAAC 
GACAATAATA GTTACAAAAT GCCTCAGGAA AAGGAAGGAC GATGCTTAAG TAGTGACAAC 
TTTATAGATA AGATTAACAA AATGAGAGGA GAAAAAAGAA GCATAAAAAG AGATAAAAAA 
TATTTGCATT TTAACCTATA TAAAGAAAAT AAAGATATAT GCGAAATATT GAAAAAATTA 
AAAATAATTT TCAAAAAAAA TAATTCTGAT ATATCTTATT GTGGAATTAA GGACAAAAGA 
GGAATAACAA TACAAAAATT TTGCATACAG AAAATCAAAA AAGAAGACAT ATATAAAATG 
TTGATTAATA ATAGCAATTG GTGTAATAGT GTTTATTTAT CCAATTTAGA ATATAAAAAA 
AACAAATTAT CTTTAGGATA TTTAAAAGGA AATTTTTTCA AAATTTTAAT TAGGGGAGTA 
AATAACAATG AAGATGAAAA AATAAAATTT CACAACCTTT TTGAAATTTT AAAAAATTTT 
GGCTTTATTA ATTACTATGG CCATCAAAGA TTTGGCAGTA AAAAAATTAA AAATTATCAA 
ATTGGTATTT CTATTTTAAA AAAAAACTAC AAGCAAGCTC TTTTTCTTAT CATTGAAAAT 
ACGAATTTGA ATCCTGAGAA AAAGAAGACA TTGATGAACT ATTTGGATAA GGTGGAGAAA 
GAATTTCTTC AATCTAACAA TATTATCCAT AAAAGTGAAA ATGAAAATGG TAAATCAAAT 
GTTGATCTAA ATGAAATAGG GCCAATTAAT CCGGACTCAG ACCTAAAACC AGACAGCGAC 
ACTCAAATTC TGAACTCGAA TTCAGATAAG CCAATAAAAA TCGCCACAAT AAAAAATGAA 
AAAAAATTCG AAAAAAAAAA AAAAAAATAC CAGAAAAATA ATGATTATTT AAATCGTTTT 
CTTAACAAAA AGCAAAACGA AAAAAATATA ATACCTAATG AAATAGAAGA AATAATAAAT 
TCGATATCAA ACAATTCTCA TGTTGAAAAA ATTATATTAG GATCATTAAA AAATAATCGC 
AATTTTAAAA ATGCATTTAT AAATATACCA AAAGATATAT TTTCGTTGTT TATACATGCA 
ACCCAAAGTT TAATTTTTAA TATTTTAGTT AATATAAGAA TGAAAAAATT CGGATTTAAA 
GTTGTGATAG GTGATTTAGT TCAATTGCCC TATAAAGGCA ATTATGAAAC TGAATTAAAG 
AGTCTCGATG GAGTAAATTC AGACTACACA TATGATAGTA TGAGCGAATC AGAAACAAAT 
TATCCTGAGA AAAAACTAAA TGACTCATCT TCAAATAATG AAATTGATTT TGATGAAAAA 
AAAATAATTA TAATAACAGA AGAAAATATT TCCCAATATA ATATTTACGA TGTCGTTTTA 
CCTCTCCCTG GTGATAAAAA TACACTTTTC CCTTCTAACT TAATTAATGA ATATAAAAAA 
GTTTTAGAAT CTTTTGAATT ATCATTTGAT CATTTTAAAT CAGACAAATA TTTATTTAAT 
GCATCAGGAG GGTATAGAAA AATTGTAGTC AAGCCATCTA ATCTTCATTC AGTTTTTATT 
AAAGCGGATT TAGCGAAGAA AAACACAATA CCGATAATAA AAGGCGATTT GTATAATTTA 
ATAAATCATA AAAATGACCA AAGTGAACAA ACATACGACC AGCAACTTAA CCAACATATT 
GTTTTTACTA ACAGTAGTTT ATATCATGAG CATCTAATTA AAGAAATACC AAATTATAAA 
GAAATGTCGT CAATTTTTTT AACTTGCTCT TTACCTAAAT CTTCTTATAT TACTGTTGCA 
CTTATGGAAA TCATCAAATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_678615.1
CDS	1..3021
Translation	MYLPYIENHGIEYLIRKNMHNLEGINGKVKTIFEDFHVHEITKNNVILHLDEIINKDKINQILEDKEKRDETNIFQNISNSDLCIQHFKKHINEFDQNVFKKFLNILHQIYLLKQKKPQKNELEQSKVENNKIESLNNEPFQKSKRKFTIPYCVLTKFDDPTLYEYNDQTNGDQYSKSNDILSVDEKKKIARKNIHNAINKYYPFLLTETKTVTKLDTVISHGNILSDQITSHLNESYTYEHLNHKINTGPQDQNEHKENDKKPFTIIEVYPNFNCLKIITPPEIFDKLKSNAKKLRSNKNYDFENVILEGLEKLKDFSKDKNKQNNHDIKISLEKKSEYHNDINHQKDTHLNLFQNKELGARYDNIINDDAKCDNFSIHSLKKKQIEMEEESTNNFLKNDNNSYKMPQEKEGRCLSSDNFIDKINKMRGEKRSIKRDKKYLHFNLYKENKDICEILKKLKIIFKKNNSDISYCGIKDKRGITIQKFCIQKIKKEDIYKMLINNSNWCNSVYLSNLEYKKNKLSLGYLKGNFFKILIRGVNNNEDEKIKFHNLFEILKNFGFINYYGHQRFGSKKIKNYQIGISILKKNYKQALFLIIENTNLNPEKKKTLMNYLDKVEKEFLQSNNIIHKSENENGKSNVDLNEIGPINPDSDLKPDSDTQILNSNSDKPIKIATIKNEKKFEKKKKKYQKNNDYLNRFLNKKQNEKNIIPNEIEEIINSISNNSHVEKIILGSLKNNRNFKNAFINIPKDIFSLFIHATQSLIFNILVNIRMKKFGFKVVIGDLVQLPYKGNYETELKSLDGVNSDYTYDSMSESETNYPEKKLNDSSSNNEIDFDEKKIIIITEENISQYNIYDVVLPLPGDKNTLFPSNLINEYKKVLESFELSFDHFKSDKYLFNASGGYRKIVVKPSNLHSVFIKADLAKKNTIPIIKGDLYNLINHKNDQSEQTYDQQLNQHIVFTNSSLYHEHLIKEIPNYKEMSSIFLTCSLPKSSYITVALMEIIK

Target ORF information:

RefSeq Version	XM_673523.1
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei strain ANKA hypothetical protein (PB000706.02.0) partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_673523.1

ORF Insert Sequence:

ATGTATTTAC CTTATATTGA AAATCATGGA ATTGAATATC TGATTAGGAA AAATATGCAT 
AATCTCGAAG GTATAAATGG TAAAGTAAAA ACAATTTTTG AAGATTTTCA TGTTCACGAA 
ATAACAAAAA ATAACGTTAT TCTACATTTG GATGAAATAA TAAATAAGGA TAAAATTAAT 
CAAATTTTAG AAGACAAAGA AAAGCGCGAT GAAACGAATA TTTTTCAAAA TATAAGTAAT 
TCAGATTTAT GTATTCAACA TTTTAAAAAA CATATAAATG AGTTTGATCA AAATGTTTTC 
AAAAAGTTTT TGAATATTTT GCACCAAATA TATTTACTAA AACAAAAAAA ACCACAAAAA 
AATGAGCTTG AACAGTCCAA AGTAGAAAAC AATAAAATCG AATCTCTAAA TAATGAACCT 
TTTCAAAAAT CAAAAAGAAA ATTCACAATT CCATATTGTG TTTTAACAAA ATTTGATGAT 
CCTACTTTAT ATGAATATAA TGATCAAACC AATGGGGACC AATATAGCAA ATCAAATGAT 
ATTCTATCAG TTGATGAAAA AAAAAAAATT GCAAGAAAAA ATATACATAA TGCTATAAAC 
AAATATTATC CTTTTTTATT AACTGAAACA AAAACAGTTA CTAAATTGGA TACAGTTATA 
TCGCATGGAA ATATATTAAG CGATCAGATA ACAAGCCATT TAAATGAATC ATATACATAC 
GAACACTTAA ATCATAAAAT TAACACTGGC CCTCAAGACC AAAATGAGCA TAAAGAAAAT 
GATAAGAAAC CTTTTACAAT CATAGAAGTT TATCCAAATT TTAATTGTCT TAAAATTATT 
ACCCCCCCTG AGATATTCGA TAAATTAAAG TCGAACGCTA AAAAATTACG TTCTAACAAA 
AATTACGATT TTGAAAATGT TATTTTAGAA GGATTAGAAA AATTAAAAGA TTTTAGTAAG 
GATAAAAATA AACAAAATAA CCACGATATA AAAATATCCC TGGAAAAAAA AAGTGAATAC 
CATAATGATA TAAATCATCA GAAGGATACT CATTTAAATT TATTTCAAAA TAAGGAACTG 
GGGGCACGTT ATGATAACAT AATTAATGAT GATGCTAAAT GCGACAATTT TTCAATCCAT 
TCGCTCAAAA AAAAGCAAAT AGAAATGGAA GAAGAAAGCA CGAATAATTT CTTAAAAAAC 
GACAATAATA GTTACAAAAT GCCTCAGGAA AAGGAAGGAC GATGCTTAAG TAGTGACAAC 
TTTATAGATA AGATTAACAA AATGAGAGGA GAAAAAAGAA GCATAAAAAG AGATAAAAAA 
TATTTGCATT TTAACCTATA TAAAGAAAAT AAAGATATAT GCGAAATATT GAAAAAATTA 
AAAATAATTT TCAAAAAAAA TAATTCTGAT ATATCTTATT GTGGAATTAA GGACAAAAGA 
GGAATAACAA TACAAAAATT TTGCATACAG AAAATCAAAA AAGAAGACAT ATATAAAATG 
TTGATTAATA ATAGCAATTG GTGTAATAGT GTTTATTTAT CCAATTTAGA ATATAAAAAA 
AACAAATTAT CTTTAGGATA TTTAAAAGGA AATTTTTTCA AAATTTTAAT TAGGGGAGTA 
AATAACAATG AAGATGAAAA AATAAAATTT CACAACCTTT TTGAAATTTT AAAAAATTTT 
GGCTTTATTA ATTACTATGG CCATCAAAGA TTTGGCAGTA AAAAAATTAA AAATTATCAA 
ATTGGTATTT CTATTTTAAA AAAAAACTAC AAGCAAGCTC TTTTTCTTAT CATTGAAAAT 
ACGAATTTGA ATCCTGAGAA AAAGAAGACA TTGATGAACT ATTTGGATAA GGTGGAGAAA 
GAATTTCTTC AATCTAACAA TATTATCCAT AAAAGTGAAA ATGAAAATGG TAAATCAAAT 
GTTGATCTAA ATGAAATAGG GCCAATTAAT CCGGACTCAG ACCTAAAACC AGACAGCGAC 
ACTCAAATTC TGAACTCGAA TTCAGATAAG CCAATAAAAA TCGCCACAAT AAAAAATGAA 
AAAAAATTCG AAAAAAAAAA AAAAAAATAC CAGAAAAATA ATGATTATTT AAATCGTTTT 
CTTAACAAAA AGCAAAACGA AAAAAATATA ATACCTAATG AAATAGAAGA AATAATAAAT 
TCGATATCAA ACAATTCTCA TGTTGAAAAA ATTATATTAG GATCATTAAA AAATAATCGC 
AATTTTAAAA ATGCATTTAT AAATATACCA AAAGATATAT TTTCGTTGTT TATACATGCA 
ACCCAAAGTT TAATTTTTAA TATTTTAGTT AATATAAGAA TGAAAAAATT CGGATTTAAA 
GTTGTGATAG GTGATTTAGT TCAATTGCCC TATAAAGGCA ATTATGAAAC TGAATTAAAG 
AGTCTCGATG GAGTAAATTC AGACTACACA TATGATAGTA TGAGCGAATC AGAAACAAAT 
TATCCTGAGA AAAAACTAAA TGACTCATCT TCAAATAATG AAATTGATTT TGATGAAAAA 
AAAATAATTA TAATAACAGA AGAAAATATT TCCCAATATA ATATTTACGA TGTCGTTTTA 
CCTCTCCCTG GTGATAAAAA TACACTTTTC CCTTCTAACT TAATTAATGA ATATAAAAAA 
GTTTTAGAAT CTTTTGAATT ATCATTTGAT CATTTTAAAT CAGACAAATA TTTATTTAAT 
GCATCAGGAG GGTATAGAAA AATTGTAGTC AAGCCATCTA ATCTTCATTC AGTTTTTATT 
AAAGCGGATT TAGCGAAGAA AAACACAATA CCGATAATAA AAGGCGATTT GTATAATTTA 
ATAAATCATA AAAATGACCA AAGTGAACAA ACATACGACC AGCAACTTAA CCAACATATT 
GTTTTTACTA ACAGTAGTTT ATATCATGAG CATCTAATTA AAGAAATACC AAATTATAAA 
GAAATGTCGT CAATTTTTTT AACTTGCTCT TTACCTAAAT CTTCTTATAT TACTGTTGCA 
CTTATGGAAA TCATCAAATA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PB000706.02.0 ( XM_022858608.1 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_022712327.1 Plasmodium berghei ANKA tRNA pseudouridine synthase D, putative (PBANKA_051880), partial mRNA.

Price & Availability↑

CloneID	OPm04580
Clone ID Related Accession (Same CDS sequence)	XM_022858608.1
Accession Version	XM_022858608.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3183bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	tRNA pseudouridine synthase D, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036163). COMPLETENESS: incomplete on both ends.

ATGTATTTAC CTTATATTGA AAATCATGGA ATTGAATATC TGATTAGGAA AAATATGCAT 
AATCTCGAAG GTATAAATGG TAAAGTAAAA ACAATTTTTG AAGATTTTCA TGTTCACGAA 
ATAACAAAAA ATAACGTTAT TCTACATTTG GATGAAATAA TAAATAAGGA TAAAATTAAT 
CAAATTTTAG AAGACAAAGA AAAGCGCGAT GAAACGAATA TTTTTCAAAA TATAAGTAAT 
TCAGATTTAT GTATTCAACA TTTTAAAAAA CATATAAATG AGTTTGATCA AAATGTTTTC 
AAAAAGTTTT TGAATATTTT GCACCAAATA TATTTACTAA AACAAAAAAA ACCACAAAAA 
AATGAGCTTG AACAGTCCAA AGTAGAAAAC AATAAAATCG AATCTCTAAA TAATGAACCT 
TTTCAAAAAT CAAAAAGAAA ATTCACAATT CCATATTGTG TTTTAACAAA ATTTGATGAT 
CCTACTTTAT ATGAATATAA TGATCAAACC AATGGGGACC AATATAGCAA ATCAAATGAT 
ATTCTATCAG TTGATGAAAA AAAAAAAATT GCAAGAAAAA ATATACATAA TGCTATAAAC 
AAATATTATC CTTTTTTATT AACTGAAACA AAAACAGTTA CTAAATTGGA TACAGTTATA 
TCGCATGGAA ATATATTAAG CGATCAGATA ACAAGCCATT TAAATGAATC ATATACATAC 
GAACACTTAA ATCATAAAAT TAACACTGGC CCTCAAGACC AAAATGAGCA TAAAGAAAAT 
GATAAGAAAC CTTTTACAAT CATAGAAGTT TATCCAAATT TTAATTGTCT TAAAATTATT 
ACCCCCCCTG AGATATTCGA TAAATTAAAG TCGAACGCTA AAAAATTACG TTCTAACAAA 
AATTACGATT TTGAAAATGT TATTTTAGAA GGATTAGAAA AATTAAAAGA TTTTAGTAAG 
GATAAAAATA AACAAAATAA CCACGATATA AAAATATCCC TGGAAAAAAA AAGTGAATAC 
CATAATGATA TAAATCATCA GAAGGATACT CATTTAAATT TATTTCAAAA TAAGGAACTG 
GGGGCACGTT ATGATAACAT AATTAATGAT GATGCTAAAT GCGACAATTT TTCAATCCAT 
TCGCTCAAAA AAAAGCGTAG AATCAACGAA CTATCAAACG AAGAAAATAT CATTCCTATT 
TTGAGTAACA CCAATAATTT AGCTAGCCCA AAAGATCAAG TAAGTAAAAG TGAAAAATAT 
ATATGCACAG AAATTGGGGT CGATACAACT GTTGCTATGA TAAAAGAAGA AACGGAAGAA 
ATAGAAATGG AAGAAGAAAG CACGAATAAT TTCTTAAAAA ACGACAATAA TAGTTACAAA 
ATGCCTCAGG AAAAGGAAGG ACGATGCTTA AGTAGTGACA ACTTTATAGA TAAGATTAAC 
AAAATGAGAG GAGAAAAAAG AAGCATAAAA AGAGATAAAA AATATTTGCA TTTTAACCTA 
TATAAAGAAA ATAAAGATAT ATGCGAAATA TTGAAAAAAT TAAAAATAAT TTTCAAAAAA 
AATAATTCTG ATATATCTTA TTGTGGAATT AAGGACAAAA GAGGAATAAC AATACAAAAA 
TTTTGCATAC AGAAAATCAA AAAAGAAGAC ATATATAAAA TGTTGATTAA TAATAGCAAT 
TGGTGTAATA GTGTTTATTT ATCCAATTTA GAATATAAAA AAAACAAATT ATCTTTAGGA 
TATTTAAAAG GAAATTTTTT CAAAATTTTA ATTAGGGGAG TAAATAACAA TGAAGATGAA 
AAAATAAAAT TTCACAACCT TTTTGAAATT TTAAAAAATT TTGGCTTTAT TAATTACTAT 
GGCCATCAAA GATTTGGCAG TAAAAAAATT AAAAATTATC AAATTGGTAT TTCTATTTTA 
AAAAAAAACT ACAAGCAAGC TCTTTTTCTT ATCATTGAAA ATACGAATTT GAATCCTGAG 
AAAAAGAAGA CATTGATGAA CTATTTGGAT AAGGTGGAGA AAGAATTTCT TCAATCTAAC 
AATATTATCC ATAAAAGTGA AAATGAAAAT GGTAAATCAA ATGTTGATCT AAATGAAATA 
GGGCCAATTA ATCCGGACTC AGACCTAAAA CCAGACAGCG ACACTCAAAT TCTGAACTCG 
AATTCAGATA AGCCAATAAA AATCGCCACA ATAAAAAATG AAAAAAAATT CGAAAAAAAA 
AAAAAAAAAT ACCAGAAAAA TAATGATTAT TTAAATCGTT TTCTTAACAA AAAGCAAAAC 
GAAAAAAATA TAATACCTAA TGAAATAGAA GAAATAATAA ATTCGATATC AAACAATTCT 
CATGTTGAAA AAATTATATT AGGATCATTA AAAAATAATC GCAATTTTAA AAATGCATTT 
ATAAATATAC CAAAAGATAT ATTTTCGTTG TTTATACATG CAACCCAAAG TTTAATTTTT 
AATATTTTAG TTAATATAAG AATGAAAAAA TTCGGATTTA AAGTTGTGAT AGGTGATTTA 
GTTCAATTGC CCTATAAAGG CAATTATGAA ACTGAATTAA AGAGTCTCGA TGGAGTAAAT 
TCAGACTACA CATATGATAG TATGAGCGAA TCAGAAACAA ATTATCCTGA GAAAAAACTA 
AATGACTCAT CTTCAAATAA TGAAATTGAT TTTGATGAAA AAAAAATAAT TATAATAACA 
GAAGAAAATA TTTCCCAATA TAATATTTAC GATGTCGTTT TACCTCTCCC TGGTGATAAA 
AATACACTTT TCCCTTCTAA CTTAATTAAT GAATATAAAA AAGTTTTAGA ATCTTTTGAA 
TTATCATTTG ATCATTTTAA ATCAGACAAA TATTTATTTA ATGCATCAGG AGGGTATAGA 
AAAATTGTAG TCAAGCCATC TAATCTTCAT TCAGTTTTTA TTAAAGCGGA TTTAGCGAAG 
AAAAACACAA TACCGATAAT AAAAGGCGAT TTGTATAATT TAATAAATCA TAAAAATGAC 
CAAAGTGAAC AAACATACGA CCAGCAACTT AACCAACATA TTGTTTTTAC TAACAGTAGT 
TTATATCATG AGCATCTAAT TAAAGAAATA CCAAATTATA AAGAAATGTC GTCAATTTTT 
TTAACTTGCT CTTTACCTAA ATCTTCTTAT ATTACTGTTG CACTTATGGA AATCATCAAA 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_022712327.1
CDS	1..3183
Translation	MYLPYIENHGIEYLIRKNMHNLEGINGKVKTIFEDFHVHEITKNNVILHLDEIINKDKINQILEDKEKRDETNIFQNISNSDLCIQHFKKHINEFDQNVFKKFLNILHQIYLLKQKKPQKNELEQSKVENNKIESLNNEPFQKSKRKFTIPYCVLTKFDDPTLYEYNDQTNGDQYSKSNDILSVDEKKKIARKNIHNAINKYYPFLLTETKTVTKLDTVISHGNILSDQITSHLNESYTYEHLNHKINTGPQDQNEHKENDKKPFTIIEVYPNFNCLKIITPPEIFDKLKSNAKKLRSNKNYDFENVILEGLEKLKDFSKDKNKQNNHDIKISLEKKSEYHNDINHQKDTHLNLFQNKELGARYDNIINDDAKCDNFSIHSLKKKRRINELSNEENIIPILSNTNNLASPKDQVSKSEKYICTEIGVDTTVAMIKEETEEIEMEEESTNNFLKNDNNSYKMPQEKEGRCLSSDNFIDKINKMRGEKRSIKRDKKYLHFNLYKENKDICEILKKLKIIFKKNNSDISYCGIKDKRGITIQKFCIQKIKKEDIYKMLINNSNWCNSVYLSNLEYKKNKLSLGYLKGNFFKILIRGVNNNEDEKIKFHNLFEILKNFGFINYYGHQRFGSKKIKNYQIGISILKKNYKQALFLIIENTNLNPEKKKTLMNYLDKVEKEFLQSNNIIHKSENENGKSNVDLNEIGPINPDSDLKPDSDTQILNSNSDKPIKIATIKNEKKFEKKKKKYQKNNDYLNRFLNKKQNEKNIIPNEIEEIINSISNNSHVEKIILGSLKNNRNFKNAFINIPKDIFSLFIHATQSLIFNILVNIRMKKFGFKVVIGDLVQLPYKGNYETELKSLDGVNSDYTYDSMSESETNYPEKKLNDSSSNNEIDFDEKKIIIITEENISQYNIYDVVLPLPGDKNTLFPSNLINEYKKVLESFELSFDHFKSDKYLFNASGGYRKIVVKPSNLHSVFIKADLAKKNTIPIIKGDLYNLINHKNDQSEQTYDQQLNQHIVFTNSSLYHEHLIKEIPNYKEMSSIFLTCSLPKSSYITVALMEIIK

Target ORF information:

RefSeq Version	XM_022858608.1
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA tRNA pseudouridine synthase D, putative (PBANKA_051880), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_022858608.1

ORF Insert Sequence:

ATGTATTTAC CTTATATTGA AAATCATGGA ATTGAATATC TGATTAGGAA AAATATGCAT 
AATCTCGAAG GTATAAATGG TAAAGTAAAA ACAATTTTTG AAGATTTTCA TGTTCACGAA 
ATAACAAAAA ATAACGTTAT TCTACATTTG GATGAAATAA TAAATAAGGA TAAAATTAAT 
CAAATTTTAG AAGACAAAGA AAAGCGCGAT GAAACGAATA TTTTTCAAAA TATAAGTAAT 
TCAGATTTAT GTATTCAACA TTTTAAAAAA CATATAAATG AGTTTGATCA AAATGTTTTC 
AAAAAGTTTT TGAATATTTT GCACCAAATA TATTTACTAA AACAAAAAAA ACCACAAAAA 
AATGAGCTTG AACAGTCCAA AGTAGAAAAC AATAAAATCG AATCTCTAAA TAATGAACCT 
TTTCAAAAAT CAAAAAGAAA ATTCACAATT CCATATTGTG TTTTAACAAA ATTTGATGAT 
CCTACTTTAT ATGAATATAA TGATCAAACC AATGGGGACC AATATAGCAA ATCAAATGAT 
ATTCTATCAG TTGATGAAAA AAAAAAAATT GCAAGAAAAA ATATACATAA TGCTATAAAC 
AAATATTATC CTTTTTTATT AACTGAAACA AAAACAGTTA CTAAATTGGA TACAGTTATA 
TCGCATGGAA ATATATTAAG CGATCAGATA ACAAGCCATT TAAATGAATC ATATACATAC 
GAACACTTAA ATCATAAAAT TAACACTGGC CCTCAAGACC AAAATGAGCA TAAAGAAAAT 
GATAAGAAAC CTTTTACAAT CATAGAAGTT TATCCAAATT TTAATTGTCT TAAAATTATT 
ACCCCCCCTG AGATATTCGA TAAATTAAAG TCGAACGCTA AAAAATTACG TTCTAACAAA 
AATTACGATT TTGAAAATGT TATTTTAGAA GGATTAGAAA AATTAAAAGA TTTTAGTAAG 
GATAAAAATA AACAAAATAA CCACGATATA AAAATATCCC TGGAAAAAAA AAGTGAATAC 
CATAATGATA TAAATCATCA GAAGGATACT CATTTAAATT TATTTCAAAA TAAGGAACTG 
GGGGCACGTT ATGATAACAT AATTAATGAT GATGCTAAAT GCGACAATTT TTCAATCCAT 
TCGCTCAAAA AAAAGCGTAG AATCAACGAA CTATCAAACG AAGAAAATAT CATTCCTATT 
TTGAGTAACA CCAATAATTT AGCTAGCCCA AAAGATCAAG TAAGTAAAAG TGAAAAATAT 
ATATGCACAG AAATTGGGGT CGATACAACT GTTGCTATGA TAAAAGAAGA AACGGAAGAA 
ATAGAAATGG AAGAAGAAAG CACGAATAAT TTCTTAAAAA ACGACAATAA TAGTTACAAA 
ATGCCTCAGG AAAAGGAAGG ACGATGCTTA AGTAGTGACA ACTTTATAGA TAAGATTAAC 
AAAATGAGAG GAGAAAAAAG AAGCATAAAA AGAGATAAAA AATATTTGCA TTTTAACCTA 
TATAAAGAAA ATAAAGATAT ATGCGAAATA TTGAAAAAAT TAAAAATAAT TTTCAAAAAA 
AATAATTCTG ATATATCTTA TTGTGGAATT AAGGACAAAA GAGGAATAAC AATACAAAAA 
TTTTGCATAC AGAAAATCAA AAAAGAAGAC ATATATAAAA TGTTGATTAA TAATAGCAAT 
TGGTGTAATA GTGTTTATTT ATCCAATTTA GAATATAAAA AAAACAAATT ATCTTTAGGA 
TATTTAAAAG GAAATTTTTT CAAAATTTTA ATTAGGGGAG TAAATAACAA TGAAGATGAA 
AAAATAAAAT TTCACAACCT TTTTGAAATT TTAAAAAATT TTGGCTTTAT TAATTACTAT 
GGCCATCAAA GATTTGGCAG TAAAAAAATT AAAAATTATC AAATTGGTAT TTCTATTTTA 
AAAAAAAACT ACAAGCAAGC TCTTTTTCTT ATCATTGAAA ATACGAATTT GAATCCTGAG 
AAAAAGAAGA CATTGATGAA CTATTTGGAT AAGGTGGAGA AAGAATTTCT TCAATCTAAC 
AATATTATCC ATAAAAGTGA AAATGAAAAT GGTAAATCAA ATGTTGATCT AAATGAAATA 
GGGCCAATTA ATCCGGACTC AGACCTAAAA CCAGACAGCG ACACTCAAAT TCTGAACTCG 
AATTCAGATA AGCCAATAAA AATCGCCACA ATAAAAAATG AAAAAAAATT CGAAAAAAAA 
AAAAAAAAAT ACCAGAAAAA TAATGATTAT TTAAATCGTT TTCTTAACAA AAAGCAAAAC 
GAAAAAAATA TAATACCTAA TGAAATAGAA GAAATAATAA ATTCGATATC AAACAATTCT 
CATGTTGAAA AAATTATATT AGGATCATTA AAAAATAATC GCAATTTTAA AAATGCATTT 
ATAAATATAC CAAAAGATAT ATTTTCGTTG TTTATACATG CAACCCAAAG TTTAATTTTT 
AATATTTTAG TTAATATAAG AATGAAAAAA TTCGGATTTA AAGTTGTGAT AGGTGATTTA 
GTTCAATTGC CCTATAAAGG CAATTATGAA ACTGAATTAA AGAGTCTCGA TGGAGTAAAT 
TCAGACTACA CATATGATAG TATGAGCGAA TCAGAAACAA ATTATCCTGA GAAAAAACTA 
AATGACTCAT CTTCAAATAA TGAAATTGAT TTTGATGAAA AAAAAATAAT TATAATAACA 
GAAGAAAATA TTTCCCAATA TAATATTTAC GATGTCGTTT TACCTCTCCC TGGTGATAAA 
AATACACTTT TCCCTTCTAA CTTAATTAAT GAATATAAAA AAGTTTTAGA ATCTTTTGAA 
TTATCATTTG ATCATTTTAA ATCAGACAAA TATTTATTTA ATGCATCAGG AGGGTATAGA 
AAAATTGTAG TCAAGCCATC TAATCTTCAT TCAGTTTTTA TTAAAGCGGA TTTAGCGAAG 
AAAAACACAA TACCGATAAT AAAAGGCGAT TTGTATAATT TAATAAATCA TAAAAATGAC 
CAAAGTGAAC AAACATACGA CCAGCAACTT AACCAACATA TTGTTTTTAC TAACAGTAGT 
TTATATCATG AGCATCTAAT TAAAGAAATA CCAAATTATA AAGAAATGTC GTCAATTTTT 
TTAACTTGCT CTTTACCTAA ATCTTCTTAT ATTACTGTTG CACTTATGGA AATCATCAAA 
TAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB000706.02.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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