PB105523.00.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene
Clones
gRNAs

Summary

Gene Symbol	PB105523.00.0
Entrez Gene ID	3424903
Full Name	RNA helicase, putative
Synonyms	PB105523.00.0
Gene Type	protein-coding
Organism	Plasmodium berghei ANKA

mRNA and Protein(s)

mRNA	Protein	Name
XM_671308.2	XP_676400.2	RNA helicase, putative
XM_671308.1	XP_676400.1	RNA helicase

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
Otto TD, Böhme U, Jackson AP, Hunt M, Franke-Fayard B, Hoeijmakers WA, Religa AA, Robertson L, Sanders M, Ogun SA, Cunningham D, Erhart A, Billker O, Khan SM, Stunnenberg HG, Langhorne J, Holder AA, Waters AP, Newbold CI, Pain A, Berriman M, Janse CJ
BMC biology1286(2014 Oct)

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK, James K, Rutherford K, Harris B, Harris D, Churcher C, Quail MA, Ormond D, Doggett J, Trueman HE, Mendoza J, Bidwell SL, Rajandream MA, Carucci DJ, Yates JR 3rd, Kafatos FC, Janse CJ, Barrell B, Turner CM, Waters AP, Sinden RE
Science (New York, N.Y.)307(5706)82-6(2005 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PB105523.00.0 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PB105523.00.0 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OPm05032	XM_671308.2 Latest version!	Plasmodium berghei ANKA RNA helicase, putative (PBANKA_080330), partial mRNA.	pcDNA3.1-C-(k)DYK or customized vector	19-21	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PB105523.00.0 ( XM_671308.2 ) cDNA ORF clone, Plasmodium berghei ANKA -> XP_676400.2 Plasmodium berghei ANKA RNA helicase, putative (PBANKA_080330), partial mRNA.

Price & Availability↑

CloneID	OPm05032
Clone ID Related Accession (Same CDS sequence)	XM_671308.2
Accession Version	XM_671308.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 3036bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	1508688000000
Organism	Plasmodium berghei ANKA
Product	RNA helicase, putative
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_036166). On Oct 24, 2017 this sequence version replaced XM_671308.1. COMPLETENESS: incomplete on both ends.

ATGATGACAA ATTGGTACTT TATGCAGATA ATAAATCAGA AAAATGGAAC ACTTTGTAAA 
AATTTGAAAT CAAGTCTTTT CAAAACAAAG GTATTAAGAA ATATATCAAT TACACGACGA 
GTACGAAAAA GAAATATCCA AACAAATATG AATGATGATG GAAATTTCGA AATAAATAAA 
GGAATGGGGG AACAAGACTC AATAAAAAGG AATATTAAAA ATATAAACAA ATCAATACTT 
AGGGAAAAGC GTGAAAAAAT AAAAGATGAA TTATATAAAA ATAGTTTTTT AAATTATAAT 
TTTAAAATAA ATATATATTT AAAGCTTAAT GAGTTAAAAA TATATAACCC AACAGAAATT 
CAAAAAAATG TAATTCCGTT GTTGCTACAA AGAAAGGAAG AAAAAGAGCT TACGAAAAAT 
AAAAATGAAA TGAATATAAT GTCTTCACAA AATTTATATA AGAACATTTT AAAAAATAGA 
GCATATATTA ATAACTATTT AAAATCGAAT TCATATATGG ATGCTGATTT TTATGATTTA 
GAAAAATACA AATGTGTTGA TACATATGAA GATGATAGAT ATGCAAATAG AAAATATAAT 
AAGTGTGAAA ATAATGAAAT AAATACAACA AAAAATAGTA AAAATGTAGC AAAATGCTTT 
AATGATATAT ATGTTATTGT TAGTCCAGAT AATAGCGGTA AAACGCTGAG TTATTTTCTT 
CCTATTATTG ACAATTTTTA TAAGAATAAT GAAAATATTA TGACGAATTT GTCTAATTTT 
TATAACTTTT TAAATAAATA TAATTACAAA AAATATCGAA ATAAACTATT CCGTAAAAAA 
GAAAAGTTAA GATACCTTAA AAATAAAGAA AATTTATTTT TTAACATATC CTATGAAAAA 
TTTAAAGTAA AAAATAGATA TATATATATG AGAAAATATA ACAATTCCAA TGTCAGTAAT 
AGTTATATTA ATAATAAAAA AAATAATAAG CTTAATAGCT TAAAGCATAA AAAAAACATT 
TATTTTCCAT ATGCCATTAT ATTGACAAAT ACTAGAGAGG CAGCTTGTGA ACTTTTTTCA 
TTTTTAAAAT GTTTTGATAT AAATATCGAG CTTTTGGCTG GTGGTTATGG AAATAAAAAA 
AAGTCCATCA AAAAATTTCA TGTCCAATCT TTTCACTCTA ATAAGAAAGA AGAAATAAAT 
TTTTGTGATA ACGACGATAT GTCCAGTAAG AATCTAGGTA GCTGCTTCAA CACAGAATCT 
CAATTTATTA GTGCCAATAA TTTTTTGAAA AAAATAAAAA ATAATTCTCA AAAAAAAAAT 
GTTATAAACT ACAATATCGA TGTTTTAATA GGAACACCTG ATAAAATTTT TGAAAAATTA 
GATAATGCTA AAAATAAGCA TTTGTATAAT TTAAAATTTT TAAAATATTT AGTAGTAGAA 
GAATCTGAAA CATTGTGTAA TCCTTTTAAT GAAAAAAAAC TTCAACTTAT ATTTAACCAT 
GTTAAAAATT ACACAAATAT GTATTATTTT AAGAGACCTG CATTAATAAA TCATGATGGG 
ACTCATAATG ATACTGAACA TGAAGAGAAA AAAGAGACAC AAAAATTAGA GGATGAAGAA 
AAGGCAGATA AAATTAATAC TAGAAAGAGG AGTAATAATA CTATTAAAGA ATTGAACAAA 
AAATATACTA GTCTTGGTGA AGAAGCTAAT GAAAATGATC AAGATGATGA ATCAGAAATT 
AGGGATGAAA AAAATAATAG TTCCGCTATT AACAATGAAG AGATAGACAA TCCTCGTGAT 
GAAACAAAAC CTGTAAAGAC AATAAATACA AATGAAAGCA TCATCAAAAA AATTGAAAGT 
ATTGAAAATG TAAAAAATAC GATAAATTCA AATATTCCTA TTACAATATT CGTATCAGCA 
ACAAAAACAT TTTGTATAAG TGAATTTTTG AGCAATAATA TCAGAAGTAA ATATGTGCAA 
CAAATAATTA ATTTGAATAG CCATGACATT CGCAATGAAA TAAAGCATGT TTTTATTAAT 
AGCAAAAGCA AGGAGAAAGT TTCTTTACTT CTCGAAATTC TTAGCAATAA AGAGTTGAAA 
ACAAAAGAAG GAAATAATCA TATTCAAAGA AATGAAAACA AAGGTGTAAA AGGTAATTCA 
CATATGTTTT TGAACAAATA TGTAATATTT TGTAATACTC GAAAAAGTGT AATGAATTTA 
AAAGATATAT TATCAGAATT AAAATACAAA GTCAGTTGTA TTCATAATGA AATGAATTAT 
AAAGACAGGA GCCAAAATTA TAGGGATTTT AAAAAAAGCA AAACAAATAT ATTAATATGT 
ACAAACATAC TAAGTAGAGG TGTACAATTT GAAAATTGTG AAATTATAAA TTATGATATT 
AGTAATAACA TAAATGACTA TATTTATAAA TCTAGCAAAG TCAACATAAA CAAATTTAAT 
AACACAAGTA ATTCATTAAC ATCGTTTTTT AATAAAAAAA ATACAAGTAT AGTAAATGAA 
ATTATAGAAA AAACTGTTGA TAAAAAACAA ATAATTTTTC AAAATTTAAA TAAAAAAGTT 
AGTAGAATGC TTAATATACA TAATAAATAT TATGATATTA TAAAAAAAAA AAAAAAATAT 
CAAAAGAGGG GTGGAAGAAA AGCATTAAAT ATGGCGCCTA GAAGAAATTG CCTCAGTAAA 
AAAAATAAAA TTTTGTCAAA AAAATTATAT TTTTATCATA AAATGAGTAT TGAGCGAAAG 
AGGCTTATCA AAAAAGGGAT ACTTAAGGGT CACGAAAAAA TACCACGATA TCCAAATAGA 
AAAGCAGAGA TATATGATAG CAATGAATAT AATAATGTAA CCAAATTAGA AGATGGATCA 
TTACAAATAT TAAGGAAAAA GAGGAAATCG AAAAAACACG CAAATGATGA ACAAGGAAGC 
TATAATCAAG AAACTATCAT TTTGGACAAT ATGCCAACTT ATGAGGATGA GACAAAAATA 
AAGGAAAAAA AACATCAAAA AAAAACATAT TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_676400.2
CDS	1..3036
Translation	MMTNWYFMQIINQKNGTLCKNLKSSLFKTKVLRNISITRRVRKRNIQTNMNDDGNFEINKGMGEQDSIKRNIKNINKSILREKREKIKDELYKNSFLNYNFKINIYLKLNELKIYNPTEIQKNVIPLLLQRKEEKELTKNKNEMNIMSSQNLYKNILKNRAYINNYLKSNSYMDADFYDLEKYKCVDTYEDDRYANRKYNKCENNEINTTKNSKNVAKCFNDIYVIVSPDNSGKTLSYFLPIIDNFYKNNENIMTNLSNFYNFLNKYNYKKYRNKLFRKKEKLRYLKNKENLFFNISYEKFKVKNRYIYMRKYNNSNVSNSYINNKKNNKLNSLKHKKNIYFPYAIILTNTREAACELFSFLKCFDINIELLAGGYGNKKKSIKKFHVQSFHSNKKEEINFCDNDDMSSKNLGSCFNTESQFISANNFLKKIKNNSQKKNVINYNIDVLIGTPDKIFEKLDNAKNKHLYNLKFLKYLVVEESETLCNPFNEKKLQLIFNHVKNYTNMYYFKRPALINHDGTHNDTEHEEKKETQKLEDEEKADKINTRKRSNNTIKELNKKYTSLGEEANENDQDDESEIRDEKNNSSAINNEEIDNPRDETKPVKTINTNESIIKKIESIENVKNTINSNIPITIFVSATKTFCISEFLSNNIRSKYVQQIINLNSHDIRNEIKHVFINSKSKEKVSLLLEILSNKELKTKEGNNHIQRNENKGVKGNSHMFLNKYVIFCNTRKSVMNLKDILSELKYKVSCIHNEMNYKDRSQNYRDFKKSKTNILICTNILSRGVQFENCEIINYDISNNINDYIYKSSKVNINKFNNTSNSLTSFFNKKNTSIVNEIIEKTVDKKQIIFQNLNKKVSRMLNIHNKYYDIIKKKKKYQKRGGRKALNMAPRRNCLSKKNKILSKKLYFYHKMSIERKRLIKKGILKGHEKIPRYPNRKAEIYDSNEYNNVTKLEDGSLQILRKKRKSKKHANDEQGSYNQETIILDNMPTYEDETKIKEKKHQKKTYF

Target ORF information:

RefSeq Version	XM_671308.2
Organism	Plasmodium berghei ANKA
Definition	Plasmodium berghei ANKA RNA helicase, putative (PBANKA_080330), partial mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_671308.2

ORF Insert Sequence:

ATGATGACAA ATTGGTACTT TATGCAGATA ATAAATCAGA AAAATGGAAC ACTTTGTAAA 
AATTTGAAAT CAAGTCTTTT CAAAACAAAG GTATTAAGAA ATATATCAAT TACACGACGA 
GTACGAAAAA GAAATATCCA AACAAATATG AATGATGATG GAAATTTCGA AATAAATAAA 
GGAATGGGGG AACAAGACTC AATAAAAAGG AATATTAAAA ATATAAACAA ATCAATACTT 
AGGGAAAAGC GTGAAAAAAT AAAAGATGAA TTATATAAAA ATAGTTTTTT AAATTATAAT 
TTTAAAATAA ATATATATTT AAAGCTTAAT GAGTTAAAAA TATATAACCC AACAGAAATT 
CAAAAAAATG TAATTCCGTT GTTGCTACAA AGAAAGGAAG AAAAAGAGCT TACGAAAAAT 
AAAAATGAAA TGAATATAAT GTCTTCACAA AATTTATATA AGAACATTTT AAAAAATAGA 
GCATATATTA ATAACTATTT AAAATCGAAT TCATATATGG ATGCTGATTT TTATGATTTA 
GAAAAATACA AATGTGTTGA TACATATGAA GATGATAGAT ATGCAAATAG AAAATATAAT 
AAGTGTGAAA ATAATGAAAT AAATACAACA AAAAATAGTA AAAATGTAGC AAAATGCTTT 
AATGATATAT ATGTTATTGT TAGTCCAGAT AATAGCGGTA AAACGCTGAG TTATTTTCTT 
CCTATTATTG ACAATTTTTA TAAGAATAAT GAAAATATTA TGACGAATTT GTCTAATTTT 
TATAACTTTT TAAATAAATA TAATTACAAA AAATATCGAA ATAAACTATT CCGTAAAAAA 
GAAAAGTTAA GATACCTTAA AAATAAAGAA AATTTATTTT TTAACATATC CTATGAAAAA 
TTTAAAGTAA AAAATAGATA TATATATATG AGAAAATATA ACAATTCCAA TGTCAGTAAT 
AGTTATATTA ATAATAAAAA AAATAATAAG CTTAATAGCT TAAAGCATAA AAAAAACATT 
TATTTTCCAT ATGCCATTAT ATTGACAAAT ACTAGAGAGG CAGCTTGTGA ACTTTTTTCA 
TTTTTAAAAT GTTTTGATAT AAATATCGAG CTTTTGGCTG GTGGTTATGG AAATAAAAAA 
AAGTCCATCA AAAAATTTCA TGTCCAATCT TTTCACTCTA ATAAGAAAGA AGAAATAAAT 
TTTTGTGATA ACGACGATAT GTCCAGTAAG AATCTAGGTA GCTGCTTCAA CACAGAATCT 
CAATTTATTA GTGCCAATAA TTTTTTGAAA AAAATAAAAA ATAATTCTCA AAAAAAAAAT 
GTTATAAACT ACAATATCGA TGTTTTAATA GGAACACCTG ATAAAATTTT TGAAAAATTA 
GATAATGCTA AAAATAAGCA TTTGTATAAT TTAAAATTTT TAAAATATTT AGTAGTAGAA 
GAATCTGAAA CATTGTGTAA TCCTTTTAAT GAAAAAAAAC TTCAACTTAT ATTTAACCAT 
GTTAAAAATT ACACAAATAT GTATTATTTT AAGAGACCTG CATTAATAAA TCATGATGGG 
ACTCATAATG ATACTGAACA TGAAGAGAAA AAAGAGACAC AAAAATTAGA GGATGAAGAA 
AAGGCAGATA AAATTAATAC TAGAAAGAGG AGTAATAATA CTATTAAAGA ATTGAACAAA 
AAATATACTA GTCTTGGTGA AGAAGCTAAT GAAAATGATC AAGATGATGA ATCAGAAATT 
AGGGATGAAA AAAATAATAG TTCCGCTATT AACAATGAAG AGATAGACAA TCCTCGTGAT 
GAAACAAAAC CTGTAAAGAC AATAAATACA AATGAAAGCA TCATCAAAAA AATTGAAAGT 
ATTGAAAATG TAAAAAATAC GATAAATTCA AATATTCCTA TTACAATATT CGTATCAGCA 
ACAAAAACAT TTTGTATAAG TGAATTTTTG AGCAATAATA TCAGAAGTAA ATATGTGCAA 
CAAATAATTA ATTTGAATAG CCATGACATT CGCAATGAAA TAAAGCATGT TTTTATTAAT 
AGCAAAAGCA AGGAGAAAGT TTCTTTACTT CTCGAAATTC TTAGCAATAA AGAGTTGAAA 
ACAAAAGAAG GAAATAATCA TATTCAAAGA AATGAAAACA AAGGTGTAAA AGGTAATTCA 
CATATGTTTT TGAACAAATA TGTAATATTT TGTAATACTC GAAAAAGTGT AATGAATTTA 
AAAGATATAT TATCAGAATT AAAATACAAA GTCAGTTGTA TTCATAATGA AATGAATTAT 
AAAGACAGGA GCCAAAATTA TAGGGATTTT AAAAAAAGCA AAACAAATAT ATTAATATGT 
ACAAACATAC TAAGTAGAGG TGTACAATTT GAAAATTGTG AAATTATAAA TTATGATATT 
AGTAATAACA TAAATGACTA TATTTATAAA TCTAGCAAAG TCAACATAAA CAAATTTAAT 
AACACAAGTA ATTCATTAAC ATCGTTTTTT AATAAAAAAA ATACAAGTAT AGTAAATGAA 
ATTATAGAAA AAACTGTTGA TAAAAAACAA ATAATTTTTC AAAATTTAAA TAAAAAAGTT 
AGTAGAATGC TTAATATACA TAATAAATAT TATGATATTA TAAAAAAAAA AAAAAAATAT 
CAAAAGAGGG GTGGAAGAAA AGCATTAAAT ATGGCGCCTA GAAGAAATTG CCTCAGTAAA 
AAAAATAAAA TTTTGTCAAA AAAATTATAT TTTTATCATA AAATGAGTAT TGAGCGAAAG 
AGGCTTATCA AAAAAGGGAT ACTTAAGGGT CACGAAAAAA TACCACGATA TCCAAATAGA 
AAAGCAGAGA TATATGATAG CAATGAATAT AATAATGTAA CCAAATTAGA AGATGGATCA 
TTACAAATAT TAAGGAAAAA GAGGAAATCG AAAAAACACG CAAATGATGA ACAAGGAAGC 
TATAATCAAG AAACTATCAT TTTGGACAAT ATGCCAACTT ATGAGGATGA GACAAAAATA 
AAGGAAAAAA AACATCAAAA AAAAACATAT TTCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

A comprehensive evaluation of rodent malaria parasite genomes and gene expression.
BMC biology1286(2014 Oct)
Otto TD,Böhme U,Jackson AP,Hunt M,Franke-Fayard B,Hoeijmakers WA,Religa AA,Robertson L,Sanders M,Ogun SA,Cunningham D,Erhart A,Billker O,Khan SM,Stunnenberg HG,Langhorne J,Holder AA,Waters AP,Newbold CI,Pain A,Berriman M,Janse CJ

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.
Science (New York, N.Y.)307(5706)82-6(2005 Jan)
Hall N,Karras M,Raine JD,Carlton JM,Kooij TW,Berriman M,Florens L,Janssen CS,Pain A,Christophides GK,James K,Rutherford K,Harris B,Harris D,Churcher C,Quail MA,Ormond D,Doggett J,Trueman HE,Mendoza J,Bidwell SL,Rajandream MA,Carucci DJ,Yates JR 3rd,Kafatos FC,Janse CJ,Barrell B,Turner CM,Waters AP,Sinden RE

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PB105523.00.0 cDNA ORF clone, Plasmodium berghei ANKA

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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